Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P17_pT_H11
(780 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41014-2|AAK32945.1| 182|Caenorhabditis elegans Hypothetical pr... 32 0.40
AL132948-8|CAC51068.1| 230|Caenorhabditis elegans Hypothetical ... 30 1.6
AF040642-4|AAN73873.2| 319|Caenorhabditis elegans Hypothetical ... 29 3.7
U23175-3|AAC46712.2| 959|Caenorhabditis elegans Anion/bicarbona... 28 6.5
U23175-2|AAM98009.1| 797|Caenorhabditis elegans Anion/bicarbona... 28 6.5
U23175-1|AAZ91355.1| 826|Caenorhabditis elegans Anion/bicarbona... 28 6.5
AY887905-1|AAX34417.1| 959|Caenorhabditis elegans anion transpo... 28 6.5
U97015-9|AAB52349.1| 343|Caenorhabditis elegans Hypothetical pr... 28 8.6
AL117195-28|CAB55014.1| 458|Caenorhabditis elegans Hypothetical... 28 8.6
>U41014-2|AAK32945.1| 182|Caenorhabditis elegans Hypothetical
protein C06G1.2 protein.
Length = 182
Score = 32.3 bits (70), Expect = 0.40
Identities = 16/40 (40%), Positives = 18/40 (45%)
Frame = -3
Query: 550 TVSMATTTATIRSRMATSRITLASDATANTPTMGNPATDT 431
T TTT T+ S T+ T AT T T PAT T
Sbjct: 82 TTEAETTTTTVESTTTTTEATTTEAATTTTTTTEEPATTT 121
>AL132948-8|CAC51068.1| 230|Caenorhabditis elegans Hypothetical
protein Y39B6A.9 protein.
Length = 230
Score = 30.3 bits (65), Expect = 1.6
Identities = 18/74 (24%), Positives = 29/74 (39%)
Frame = -2
Query: 668 YQADERGFKPHISYEESEDARSGYDANANNHAGYDXXXXXXXXXXXXXHDSESHGDFSHH 489
Y+AD+ G+ H + + + Y + Y D HGD +H
Sbjct: 42 YEADQTGYGGHNGMSDYGNEQGAY---GHYDGKYGEAGKKSGQEYYAKGDEHGHGDEAHE 98
Query: 488 AGFGRNGEHAHNGK 447
G +NG+ A+ GK
Sbjct: 99 KGLKKNGD-AYGGK 111
>AF040642-4|AAN73873.2| 319|Caenorhabditis elegans Hypothetical
protein C50D2.8 protein.
Length = 319
Score = 29.1 bits (62), Expect = 3.7
Identities = 12/30 (40%), Positives = 15/30 (50%)
Frame = -2
Query: 653 RGFKPHISYEESEDARSGYDANANNHAGYD 564
R PH S +S D+R D + H GYD
Sbjct: 279 RSRSPHRSSHDSRDSRDSRDRREHRHHGYD 308
>U23175-3|AAC46712.2| 959|Caenorhabditis elegans Anion/bicarbonate
transporter familyprotein 3, isoform a protein.
Length = 959
Score = 28.3 bits (60), Expect = 6.5
Identities = 17/67 (25%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Frame = -2
Query: 290 VKVTFYIEILF-IYVAVSVKFFIIMNCIIVYCNLFKIK*ILMQKRPIHSFAHR*QMAL*S 114
V + YI+++F I + F + C+ ++C +F I + + FA R + S
Sbjct: 510 VPLAIYIKVIFKISQELGYDFLAMYACVGLFCQMFLILYSATELCSLMKFATRSAEEMFS 569
Query: 113 LFLRVLF 93
LF+ + F
Sbjct: 570 LFIAIAF 576
>U23175-2|AAM98009.1| 797|Caenorhabditis elegans Anion/bicarbonate
transporter familyprotein 3, isoform b protein.
Length = 797
Score = 28.3 bits (60), Expect = 6.5
Identities = 17/67 (25%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Frame = -2
Query: 290 VKVTFYIEILF-IYVAVSVKFFIIMNCIIVYCNLFKIK*ILMQKRPIHSFAHR*QMAL*S 114
V + YI+++F I + F + C+ ++C +F I + + FA R + S
Sbjct: 348 VPLAIYIKVIFKISQELGYDFLAMYACVGLFCQMFLILYSATELCSLMKFATRSAEEMFS 407
Query: 113 LFLRVLF 93
LF+ + F
Sbjct: 408 LFIAIAF 414
>U23175-1|AAZ91355.1| 826|Caenorhabditis elegans Anion/bicarbonate
transporter familyprotein 3, isoform c protein.
Length = 826
Score = 28.3 bits (60), Expect = 6.5
Identities = 17/67 (25%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Frame = -2
Query: 290 VKVTFYIEILF-IYVAVSVKFFIIMNCIIVYCNLFKIK*ILMQKRPIHSFAHR*QMAL*S 114
V + YI+++F I + F + C+ ++C +F I + + FA R + S
Sbjct: 377 VPLAIYIKVIFKISQELGYDFLAMYACVGLFCQMFLILYSATELCSLMKFATRSAEEMFS 436
Query: 113 LFLRVLF 93
LF+ + F
Sbjct: 437 LFIAIAF 443
>AY887905-1|AAX34417.1| 959|Caenorhabditis elegans anion
transporter ABTS-3 protein.
Length = 959
Score = 28.3 bits (60), Expect = 6.5
Identities = 17/67 (25%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Frame = -2
Query: 290 VKVTFYIEILF-IYVAVSVKFFIIMNCIIVYCNLFKIK*ILMQKRPIHSFAHR*QMAL*S 114
V + YI+++F I + F + C+ ++C +F I + + FA R + S
Sbjct: 510 VPLAIYIKVIFKISQELGYDFLAMYACVGLFCQMFLILYSATELCSLMKFATRSAEEMFS 569
Query: 113 LFLRVLF 93
LF+ + F
Sbjct: 570 LFIAIAF 576
>U97015-9|AAB52349.1| 343|Caenorhabditis elegans Hypothetical
protein F48C1.8 protein.
Length = 343
Score = 27.9 bits (59), Expect = 8.6
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = -2
Query: 515 ESHGDFSHHAGFGRNGEHAHNGKSRNG 435
E+HG HH G G G H H G G
Sbjct: 170 EAHGG-GHHGGGGGGGSHHHGGGGGGG 195
>AL117195-28|CAB55014.1| 458|Caenorhabditis elegans Hypothetical
protein Y57A10A.11 protein.
Length = 458
Score = 27.9 bits (59), Expect = 8.6
Identities = 14/40 (35%), Positives = 18/40 (45%)
Frame = -3
Query: 550 TVSMATTTATIRSRMATSRITLASDATANTPTMGNPATDT 431
T + TTT T + TS T + T T T P+T T
Sbjct: 129 TTTKKTTTTTTTTTTTTSTTTTEAPTTTKTTTTRRPSTTT 168
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,152,836
Number of Sequences: 27780
Number of extensions: 293080
Number of successful extensions: 924
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 846
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 923
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1882685842
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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