Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_pT_H08
         (661 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M15353-1|AAC13647.1|  217|Homo sapiens cap-binding protein protein.    50   7e-06
BC107715-1|AAI07716.1|  217|Homo sapiens eukaryotic translation ...    50   7e-06
BC043226-1|AAH43226.1|  217|Homo sapiens eukaryotic translation ...    50   7e-06
BC035166-1|AAH35166.1|  217|Homo sapiens eukaryotic translation ...    50   7e-06
BC012611-1|AAH12611.1|  217|Homo sapiens eukaryotic translation ...    50   7e-06

>M15353-1|AAC13647.1|  217|Homo sapiens cap-binding protein protein.
          Length = 217

 Score = 50.0 bits (114), Expect = 7e-06
 Identities = 25/55 (45%), Positives = 32/55 (58%), Gaps = 2/55 (3%)
 Frame = -2

Query: 660 IAIWTADAMKQHATIEIGKKLKEQLGIHGK--IGFQVHRDTMVKHSSATKNLYTV 502
           IAIWT +   + A   IG+  KE+LG+  K  IG+Q H DT  K  S TKN + V
Sbjct: 163 IAIWTTECENREAVTHIGRVYKERLGLPPKIVIGYQSHADTATKSGSTTKNRFVV 217


>BC107715-1|AAI07716.1|  217|Homo sapiens eukaryotic translation
           initiation factor 4E protein.
          Length = 217

 Score = 50.0 bits (114), Expect = 7e-06
 Identities = 25/55 (45%), Positives = 32/55 (58%), Gaps = 2/55 (3%)
 Frame = -2

Query: 660 IAIWTADAMKQHATIEIGKKLKEQLGIHGK--IGFQVHRDTMVKHSSATKNLYTV 502
           IAIWT +   + A   IG+  KE+LG+  K  IG+Q H DT  K  S TKN + V
Sbjct: 163 IAIWTTECENREAVTHIGRVYKERLGLPPKIVIGYQSHADTATKSGSTTKNRFVV 217


>BC043226-1|AAH43226.1|  217|Homo sapiens eukaryotic translation
           initiation factor 4E protein.
          Length = 217

 Score = 50.0 bits (114), Expect = 7e-06
 Identities = 25/55 (45%), Positives = 32/55 (58%), Gaps = 2/55 (3%)
 Frame = -2

Query: 660 IAIWTADAMKQHATIEIGKKLKEQLGIHGK--IGFQVHRDTMVKHSSATKNLYTV 502
           IAIWT +   + A   IG+  KE+LG+  K  IG+Q H DT  K  S TKN + V
Sbjct: 163 IAIWTTECENREAVTHIGRVYKERLGLPPKIVIGYQSHADTATKSGSTTKNRFVV 217


>BC035166-1|AAH35166.1|  217|Homo sapiens eukaryotic translation
           initiation factor 4E protein.
          Length = 217

 Score = 50.0 bits (114), Expect = 7e-06
 Identities = 25/55 (45%), Positives = 32/55 (58%), Gaps = 2/55 (3%)
 Frame = -2

Query: 660 IAIWTADAMKQHATIEIGKKLKEQLGIHGK--IGFQVHRDTMVKHSSATKNLYTV 502
           IAIWT +   + A   IG+  KE+LG+  K  IG+Q H DT  K  S TKN + V
Sbjct: 163 IAIWTTECENREAVTHIGRVYKERLGLPPKIVIGYQSHADTATKSGSTTKNRFVV 217


>BC012611-1|AAH12611.1|  217|Homo sapiens eukaryotic translation
           initiation factor 4E protein.
          Length = 217

 Score = 50.0 bits (114), Expect = 7e-06
 Identities = 25/55 (45%), Positives = 32/55 (58%), Gaps = 2/55 (3%)
 Frame = -2

Query: 660 IAIWTADAMKQHATIEIGKKLKEQLGIHGK--IGFQVHRDTMVKHSSATKNLYTV 502
           IAIWT +   + A   IG+  KE+LG+  K  IG+Q H DT  K  S TKN + V
Sbjct: 163 IAIWTTECENREAVTHIGRVYKERLGLPPKIVIGYQSHADTATKSGSTTKNRFVV 217


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 77,479,439
Number of Sequences: 237096
Number of extensions: 1436569
Number of successful extensions: 1926
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1869
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1921
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7422585720
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)