Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P17_pT_H07
(682 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY043293-2|AAK96034.1| 353|Tribolium castaneum homeodomain tran... 25 0.57
AF231104-1|AAF64149.1| 142|Tribolium castaneum labial protein p... 25 0.57
AF231103-1|AAF64148.1| 142|Tribolium castaneum labial protein p... 25 0.57
AF452568-1|AAL57830.1| 243|Tribolium castaneum homeodomain tran... 22 5.3
AF322227-1|AAK01654.1| 782|Tribolium castaneum cell surface pro... 22 5.3
AF321227-5|AAK16425.1| 292|Tribolium castaneum Zen2 protein. 22 5.3
AF260820-1|AAG02018.1| 139|Tribolium castaneum alpha-esterase l... 22 5.3
AF230313-1|AAF64147.1| 210|Tribolium castaneum labial protein p... 22 5.3
AF230312-1|AAF64146.1| 253|Tribolium castaneum labial protein p... 22 5.3
U09586-3|AAC47272.1| 470|Tribolium castaneum integrase protein. 21 7.1
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept... 21 7.1
AM292324-1|CAL23136.1| 398|Tribolium castaneum gustatory recept... 21 7.1
EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic acetyl... 21 9.3
EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic acetyl... 21 9.3
EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic acetyl... 21 9.3
EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic acetyl... 21 9.3
EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic acetyl... 21 9.3
>AY043293-2|AAK96034.1| 353|Tribolium castaneum homeodomain
transcription factor Labialprotein.
Length = 353
Score = 25.0 bits (52), Expect = 0.57
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +1
Query: 550 FDNRRLKYRYREKQGLI 600
F NRR+K + R K+GLI
Sbjct: 301 FQNRRMKQKKRMKEGLI 317
Score = 21.8 bits (44), Expect = 5.3
Identities = 8/18 (44%), Positives = 10/18 (55%)
Frame = +1
Query: 160 ILD*HVFHFLHNEKKKFE 213
+ D H HFLH K + E
Sbjct: 122 VADGHQHHFLHENKYQLE 139
>AF231104-1|AAF64149.1| 142|Tribolium castaneum labial protein
protein.
Length = 142
Score = 25.0 bits (52), Expect = 0.57
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +1
Query: 550 FDNRRLKYRYREKQGLI 600
F NRR+K + R K+GLI
Sbjct: 90 FQNRRMKQKKRMKEGLI 106
>AF231103-1|AAF64148.1| 142|Tribolium castaneum labial protein
protein.
Length = 142
Score = 25.0 bits (52), Expect = 0.57
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +1
Query: 550 FDNRRLKYRYREKQGLI 600
F NRR+K + R K+GLI
Sbjct: 90 FQNRRMKQKKRMKEGLI 106
>AF452568-1|AAL57830.1| 243|Tribolium castaneum homeodomain
transcription factor Zen2 protein.
Length = 243
Score = 21.8 bits (44), Expect = 5.3
Identities = 7/17 (41%), Positives = 12/17 (70%)
Frame = +1
Query: 550 FDNRRLKYRYREKQGLI 600
F NRR+K++ EK ++
Sbjct: 133 FQNRRMKFKKEEKNKVV 149
>AF322227-1|AAK01654.1| 782|Tribolium castaneum cell surface
protein chaoptin protein.
Length = 782
Score = 21.8 bits (44), Expect = 5.3
Identities = 12/41 (29%), Positives = 21/41 (51%)
Frame = +2
Query: 485 YSNQSVLTYQ*HFFFQMHRLPPLIIDDSNIGIEKNKG*LNL 607
+S SV Q H F + +L + +DD+ I + + +NL
Sbjct: 99 FSFNSVRNVQQHTFADLIQLEQIHLDDNRIESLERRAFMNL 139
>AF321227-5|AAK16425.1| 292|Tribolium castaneum Zen2 protein.
Length = 292
Score = 21.8 bits (44), Expect = 5.3
Identities = 7/17 (41%), Positives = 12/17 (70%)
Frame = +1
Query: 550 FDNRRLKYRYREKQGLI 600
F NRR+K++ EK ++
Sbjct: 153 FQNRRMKFKKEEKNKVV 169
>AF260820-1|AAG02018.1| 139|Tribolium castaneum alpha-esterase like
protein E1 protein.
Length = 139
Score = 21.8 bits (44), Expect = 5.3
Identities = 7/23 (30%), Positives = 15/23 (65%)
Frame = +3
Query: 123 YVLNVNIIIKFLNFRLACFPFSS 191
Y+++ N+++ +N+RL F S
Sbjct: 99 YLMSENVVLVTINYRLGMLGFLS 121
>AF230313-1|AAF64147.1| 210|Tribolium castaneum labial protein
protein.
Length = 210
Score = 21.8 bits (44), Expect = 5.3
Identities = 8/18 (44%), Positives = 10/18 (55%)
Frame = +1
Query: 160 ILD*HVFHFLHNEKKKFE 213
+ D H HFLH K + E
Sbjct: 122 VADGHQHHFLHENKYQLE 139
>AF230312-1|AAF64146.1| 253|Tribolium castaneum labial protein
protein.
Length = 253
Score = 21.8 bits (44), Expect = 5.3
Identities = 8/18 (44%), Positives = 10/18 (55%)
Frame = +1
Query: 160 ILD*HVFHFLHNEKKKFE 213
+ D H HFLH K + E
Sbjct: 122 VADGHQHHFLHENKYQLE 139
>U09586-3|AAC47272.1| 470|Tribolium castaneum integrase protein.
Length = 470
Score = 21.4 bits (43), Expect = 7.1
Identities = 7/16 (43%), Positives = 10/16 (62%)
Frame = +1
Query: 424 VNY*PLFNAGFEPYSL 471
+NY P + GF PY +
Sbjct: 330 LNYVPHISTGFSPYEI 345
>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
candidate 46 protein.
Length = 1451
Score = 21.4 bits (43), Expect = 7.1
Identities = 18/59 (30%), Positives = 27/59 (45%)
Frame = +3
Query: 6 IICXQKFRFNLGLLKAQFIXLXCHXRXNSI*HLSSRFQMYVLNVNIIIKFLNFRLACFP 182
I+ Q++ F+ GLL F + + L SRF + +N I+FLN L P
Sbjct: 156 IVSEQEWSFSTGLLVMIFNSALSYKASEIVVMLRSRFAI----LNKQIRFLNQYLRLKP 210
>AM292324-1|CAL23136.1| 398|Tribolium castaneum gustatory receptor
candidate 3 protein.
Length = 398
Score = 21.4 bits (43), Expect = 7.1
Identities = 18/59 (30%), Positives = 27/59 (45%)
Frame = +3
Query: 6 IICXQKFRFNLGLLKAQFIXLXCHXRXNSI*HLSSRFQMYVLNVNIIIKFLNFRLACFP 182
I+ Q++ F+ GLL F + + L SRF + +N I+FLN L P
Sbjct: 174 IVSEQEWSFSTGLLVMIFNSALSYKASEIVVMLRSRFAI----LNKQIRFLNQYLRLKP 228
>EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
5 protein.
Length = 311
Score = 21.0 bits (42), Expect = 9.3
Identities = 9/26 (34%), Positives = 11/26 (42%)
Frame = -3
Query: 665 PNVFAKFNVSFLIRNCLIYINLISPC 588
P V F + R + NLI PC
Sbjct: 197 PYVDVTFTIKIRRRTLYYFFNLIVPC 222
>EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
4 protein.
Length = 311
Score = 21.0 bits (42), Expect = 9.3
Identities = 9/26 (34%), Positives = 11/26 (42%)
Frame = -3
Query: 665 PNVFAKFNVSFLIRNCLIYINLISPC 588
P V F + R + NLI PC
Sbjct: 197 PYVDVTFTIKIRRRTLYYFFNLIVPC 222
>EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
3 protein.
Length = 311
Score = 21.0 bits (42), Expect = 9.3
Identities = 9/26 (34%), Positives = 11/26 (42%)
Frame = -3
Query: 665 PNVFAKFNVSFLIRNCLIYINLISPC 588
P V F + R + NLI PC
Sbjct: 197 PYVDVTFTIKIRRRTLYYFFNLIVPC 222
>EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
2 protein.
Length = 311
Score = 21.0 bits (42), Expect = 9.3
Identities = 9/26 (34%), Positives = 11/26 (42%)
Frame = -3
Query: 665 PNVFAKFNVSFLIRNCLIYINLISPC 588
P V F + R + NLI PC
Sbjct: 197 PYVDVTFTIKIRRRTLYYFFNLIVPC 222
>EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
1 protein.
Length = 311
Score = 21.0 bits (42), Expect = 9.3
Identities = 9/26 (34%), Positives = 11/26 (42%)
Frame = -3
Query: 665 PNVFAKFNVSFLIRNCLIYINLISPC 588
P V F + R + NLI PC
Sbjct: 197 PYVDVTFTIKIRRRTLYYFFNLIVPC 222
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 131,090
Number of Sequences: 336
Number of extensions: 2444
Number of successful extensions: 18
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17801955
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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