Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_pT_G23
         (508 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride...    21   5.6  
DQ435333-1|ABD92648.1|  135|Apis mellifera OBP16 protein.              21   7.3  
DQ435334-1|ABD92649.1|  135|Apis mellifera OBP17 protein.              21   9.7  

>DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride
           channel variant 1 protein.
          Length = 509

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -1

Query: 415 RRLTPPVADSDRHC 374
           +RL PPV D+D  C
Sbjct: 76  KRLLPPVQDADFCC 89


>DQ435333-1|ABD92648.1|  135|Apis mellifera OBP16 protein.
          Length = 135

 Score = 21.0 bits (42), Expect = 7.3
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -2

Query: 270 YIKCNLKKKNVYSNN 226
           Y++C +KK NV   N
Sbjct: 62  YVECMMKKFNVVDEN 76


>DQ435334-1|ABD92649.1|  135|Apis mellifera OBP17 protein.
          Length = 135

 Score = 20.6 bits (41), Expect = 9.7
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -2

Query: 270 YIKCNLKKKNVYSNN 226
           +I+C +KK NV   N
Sbjct: 62  FIECTMKKFNVVDEN 76


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 113,126
Number of Sequences: 438
Number of extensions: 2066
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 13986774
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)