Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_pT_G18
         (739 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_1755 - 29235650-29235754,29236432-29236525,29236710-292368...    28   8.9  
04_04_1547 - 34306836-34308713,34308938-34309048,34310056-34310202     28   8.9  

>07_03_1755 -
           29235650-29235754,29236432-29236525,29236710-29236837,
           29237077-29237181,29237706-29237773,29237926-29238037
          Length = 203

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 15/36 (41%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
 Frame = +3

Query: 90  LHMLIPPTVHPSCRL--STIYSPMXCLSYISWYCVI 191
           L  LIPPTV PS  +  S ++ P+      SWYC++
Sbjct: 20  LLFLIPPTV-PSIDVDASDVHVPIGLKKNTSWYCLV 54


>04_04_1547 - 34306836-34308713,34308938-34309048,34310056-34310202
          Length = 711

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = -2

Query: 699 GLMLLECYY*CRGDCIYGKGCAHRYRG 619
           G  L+ CYY  +G+C+ G  CA  Y G
Sbjct: 112 GKQLVPCYYFKKGNCLKGDRCAF-YHG 137


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,646,451
Number of Sequences: 37544
Number of extensions: 334592
Number of successful extensions: 623
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 606
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 623
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1945321620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)