Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P17_pT_G18
(739 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL589653-1|CAI40809.1| 1560|Homo sapiens proprotein convertase s... 31 3.3
AL391868-1|CAI40675.1| 1560|Homo sapiens proprotein convertase s... 31 3.3
AL353607-3|CAI41234.1| 1560|Homo sapiens proprotein convertase s... 31 3.3
BC002764-1|AAH02764.2| 528|Homo sapiens Wolf-Hirschhorn syndrom... 31 5.7
AL132868-2|CAM15219.1| 539|Homo sapiens Wolf-Hirschhorn syndrom... 31 5.7
AK222853-1|BAD96573.1| 528|Homo sapiens Wolf-Hirschhorn syndrom... 31 5.7
AF101434-1|AAC72982.1| 525|Homo sapiens Wolf-Hirschhorn syndrom... 31 5.7
AB044549-1|BAB18651.1| 549|Homo sapiens Wolf-Hirshhorn syndrome... 31 5.7
AF328787-1|AAK00959.1| 2146|Homo sapiens ABC transporter member ... 30 7.5
AF311102-1|AAN04657.1| 2146|Homo sapiens ABC transporter ABCA7 p... 30 7.5
AF250238-1|AAF85794.1| 2146|Homo sapiens macrophage ABC transpor... 30 7.5
>AL589653-1|CAI40809.1| 1560|Homo sapiens proprotein convertase
subtilisin/kexin type 5 protein.
Length = 1560
Score = 31.5 bits (68), Expect = 3.3
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +3
Query: 555 NGVCSL*PT*CQFSQYSGTACHPCTGVHTLYH 650
+G+C + C+ + + T CH C G H L+H
Sbjct: 974 DGICERCSSPCRTCEGNATNCHSCEGGHVLHH 1005
>AL391868-1|CAI40675.1| 1560|Homo sapiens proprotein convertase
subtilisin/kexin type 5 protein.
Length = 1560
Score = 31.5 bits (68), Expect = 3.3
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +3
Query: 555 NGVCSL*PT*CQFSQYSGTACHPCTGVHTLYH 650
+G+C + C+ + + T CH C G H L+H
Sbjct: 974 DGICERCSSPCRTCEGNATNCHSCEGGHVLHH 1005
>AL353607-3|CAI41234.1| 1560|Homo sapiens proprotein convertase
subtilisin/kexin type 5 protein.
Length = 1560
Score = 31.5 bits (68), Expect = 3.3
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +3
Query: 555 NGVCSL*PT*CQFSQYSGTACHPCTGVHTLYH 650
+G+C + C+ + + T CH C G H L+H
Sbjct: 974 DGICERCSSPCRTCEGNATNCHSCEGGHVLHH 1005
>BC002764-1|AAH02764.2| 528|Homo sapiens Wolf-Hirschhorn syndrome
candidate 2 protein.
Length = 528
Score = 30.7 bits (66), Expect = 5.7
Identities = 15/49 (30%), Positives = 27/49 (55%)
Frame = -1
Query: 496 QIENTNPHYQNIVRRIHCQLGKCISIGTIPNILQHCIKNHLFCSHPPLT 350
++E NP+ Q+I+ + ++G+C + +P Q+ KN L PLT
Sbjct: 109 ELEEQNPNVQDILGELREKVGECEASAMLPLECQYLNKNALTTLAGPLT 157
>AL132868-2|CAM15219.1| 539|Homo sapiens Wolf-Hirschhorn syndrome
candidate 2 protein.
Length = 539
Score = 30.7 bits (66), Expect = 5.7
Identities = 15/49 (30%), Positives = 27/49 (55%)
Frame = -1
Query: 496 QIENTNPHYQNIVRRIHCQLGKCISIGTIPNILQHCIKNHLFCSHPPLT 350
++E NP+ Q+I+ + ++G+C + +P Q+ KN L PLT
Sbjct: 120 ELEEQNPNVQDILGELREKVGECEASAMLPLECQYLNKNALTTLAGPLT 168
>AK222853-1|BAD96573.1| 528|Homo sapiens Wolf-Hirschhorn syndrome
candidate 2 protein variant protein.
Length = 528
Score = 30.7 bits (66), Expect = 5.7
Identities = 15/49 (30%), Positives = 27/49 (55%)
Frame = -1
Query: 496 QIENTNPHYQNIVRRIHCQLGKCISIGTIPNILQHCIKNHLFCSHPPLT 350
++E NP+ Q+I+ + ++G+C + +P Q+ KN L PLT
Sbjct: 109 ELEEQNPNVQDILGELREKVGECEASAMLPLECQYLNKNALTTLAGPLT 157
>AF101434-1|AAC72982.1| 525|Homo sapiens Wolf-Hirschhorn syndrome
candidate 2 protein protein.
Length = 525
Score = 30.7 bits (66), Expect = 5.7
Identities = 15/49 (30%), Positives = 27/49 (55%)
Frame = -1
Query: 496 QIENTNPHYQNIVRRIHCQLGKCISIGTIPNILQHCIKNHLFCSHPPLT 350
++E NP+ Q+I+ + ++G+C + +P Q+ KN L PLT
Sbjct: 106 ELEEQNPNVQDILGELREKVGECEASAMLPLECQYLNKNALTTLAGPLT 154
>AB044549-1|BAB18651.1| 549|Homo sapiens Wolf-Hirshhorn syndrome
candidate 2 protein protein.
Length = 549
Score = 30.7 bits (66), Expect = 5.7
Identities = 15/49 (30%), Positives = 27/49 (55%)
Frame = -1
Query: 496 QIENTNPHYQNIVRRIHCQLGKCISIGTIPNILQHCIKNHLFCSHPPLT 350
++E NP+ Q+I+ + ++G+C + +P Q+ KN L PLT
Sbjct: 130 ELEEQNPNVQDILGELREKVGECEASAMLPLECQYLNKNALTTLAGPLT 178
>AF328787-1|AAK00959.1| 2146|Homo sapiens ABC transporter member 7
protein.
Length = 2146
Score = 30.3 bits (65), Expect = 7.5
Identities = 20/74 (27%), Positives = 31/74 (41%), Gaps = 4/74 (5%)
Frame = +3
Query: 105 PPTVHPSCRLSTIYSPMXCLSYISWYCVICCNLSTLCF-SLKSGEIAGQVLRC*Q---SN 272
PP H C P+ + W + CN++ CF L GE G++ S
Sbjct: 47 PPLEHHECHFPN--KPLPSAGTVPWLQGLICNVNNTCFPQLTPGEEPGRLSNFNDSLVSR 104
Query: 273 LLTNMRPTVAGATS 314
LL + R + GA++
Sbjct: 105 LLADARTVLGGASA 118
>AF311102-1|AAN04657.1| 2146|Homo sapiens ABC transporter ABCA7
protein.
Length = 2146
Score = 30.3 bits (65), Expect = 7.5
Identities = 20/74 (27%), Positives = 31/74 (41%), Gaps = 4/74 (5%)
Frame = +3
Query: 105 PPTVHPSCRLSTIYSPMXCLSYISWYCVICCNLSTLCF-SLKSGEIAGQVLRC*Q---SN 272
PP H C P+ + W + CN++ CF L GE G++ S
Sbjct: 47 PPLEHHECHFPN--KPLPSAGTVPWLQGLICNVNNTCFPQLTPGEEPGRLSNFNDSLVSR 104
Query: 273 LLTNMRPTVAGATS 314
LL + R + GA++
Sbjct: 105 LLADARTVLGGASA 118
>AF250238-1|AAF85794.1| 2146|Homo sapiens macrophage ABC transporter
protein.
Length = 2146
Score = 30.3 bits (65), Expect = 7.5
Identities = 20/74 (27%), Positives = 31/74 (41%), Gaps = 4/74 (5%)
Frame = +3
Query: 105 PPTVHPSCRLSTIYSPMXCLSYISWYCVICCNLSTLCF-SLKSGEIAGQVLRC*Q---SN 272
PP H C P+ + W + CN++ CF L GE G++ S
Sbjct: 47 PPLEHHECHFPN--KPLPSAGTVPWLQGLICNVNNTCFPQLTPGEEPGRLSNFNDSLVSR 104
Query: 273 LLTNMRPTVAGATS 314
LL + R + GA++
Sbjct: 105 LLADARTVLGGASA 118
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,019,876
Number of Sequences: 237096
Number of extensions: 2048667
Number of successful extensions: 3643
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 3495
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3636
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8791154398
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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