Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_pT_G16
         (745 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_04_0141 + 23079516-23079925,23080006-23080084,23080204-230803...   215   2e-56
02_04_0360 + 22353057-22353691,22354716-22355144,22355233-223553...   215   2e-56
08_02_0753 - 20805672-20805731,20805825-20805941,20806394-208065...   215   3e-56
11_06_0036 + 19474848-19475188,19475696-19475774,19475880-194760...   214   7e-56
03_05_0881 + 28461857-28462263,28462357-28462435,28462798-284629...   212   2e-55
08_02_1026 + 23743186-23743686,23743793-23743915,23744734-237448...   208   3e-54
01_01_0767 + 5931031-5931281,5931414-5931594,5932020-5932129,593...   129   6e-35
11_06_0360 - 22699524-22699529,22699865-22699899,22700650-227007...   110   1e-24
08_01_0533 + 4625376-4625709,4625799-4625966,4627428-4627689,462...    29   2.9  
04_04_1588 - 34633057-34633824                                         28   6.8  
04_04_1354 - 32841778-32841983,32842079-32843093,32843184-328435...    28   6.8  
06_03_1237 + 28602250-28604196                                         28   9.0  
02_02_0106 + 6814391-6817007,6817086-6817462                           28   9.0  

>04_04_0141 +
           23079516-23079925,23080006-23080084,23080204-23080326,
           23081655-23081771,23081886-23081945
          Length = 262

 Score =  215 bits (526), Expect = 2e-56
 Identities = 101/142 (71%), Positives = 118/142 (83%)
 Frame = -3

Query: 725 VLGLLDKHLIPKASNPESKVFYLKMKGDYYRYLAEVATGETRHSVVEDSQKAYQDAFEIS 546
           +L LL+ HL+P ++ PESKVFYLKMKGDYYRYLAE  TG  R    E++  AY+ A +I+
Sbjct: 107 ILKLLESHLVPSSTAPESKVFYLKMKGDYYRYLAEFKTGAERKDAAENTMVAYKAAQDIA 166

Query: 545 KAKMQPTHPIRLGLALNFSVFYYEILNSPDKACQLAKQAFDDAIAELDTLNEDSYKDSTL 366
            A++ PTHPIRLGLALNFSVFYYEILNSPD+AC LAKQAFD+AI+ELDTL+E+SYKDSTL
Sbjct: 167 LAELPPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLSEESYKDSTL 226

Query: 365 IMQLLRDNLTLWTSDTQGDGDE 300
           IMQLLRDNLTLWTSD   D  E
Sbjct: 227 IMQLLRDNLTLWTSDISEDTAE 248


>02_04_0360 +
           22353057-22353691,22354716-22355144,22355233-22355311,
           22355472-22355594,22356256-22356372,22356636-22356833
          Length = 526

 Score =  215 bits (526), Expect = 2e-56
 Identities = 100/135 (74%), Positives = 116/135 (85%)
 Frame = -3

Query: 725 VLGLLDKHLIPKASNPESKVFYLKMKGDYYRYLAEVATGETRHSVVEDSQKAYQDAFEIS 546
           +L LLD HL+P ++ PESKVFYLKMKGDYYRYLAE  TG  R    E++  AY+ A +I+
Sbjct: 325 ILKLLDSHLVPSSTAPESKVFYLKMKGDYYRYLAEFKTGAERKDAAENTMVAYKAAQDIA 384

Query: 545 KAKMQPTHPIRLGLALNFSVFYYEILNSPDKACQLAKQAFDDAIAELDTLNEDSYKDSTL 366
            A++ PTHPIRLGLALNFSVFYYEILNSPD+AC LAKQAFD+AI+ELDTL+E+SYKDSTL
Sbjct: 385 LAELPPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLSEESYKDSTL 444

Query: 365 IMQLLRDNLTLWTSD 321
           IMQLLRDNLTLWTSD
Sbjct: 445 IMQLLRDNLTLWTSD 459


>08_02_0753 -
           20805672-20805731,20805825-20805941,20806394-20806516,
           20806700-20806778,20806867-20807258
          Length = 256

 Score =  215 bits (525), Expect = 3e-56
 Identities = 104/146 (71%), Positives = 118/146 (80%), Gaps = 1/146 (0%)
 Frame = -3

Query: 725 VLGLLDKHLIPKASNPESKVFYLKMKGDYYRYLAEVATGETRHSVVEDSQKAYQDAFEIS 546
           +L LLD HL+P ++  ESKVFYLKMKGDY+RYLAE  TG  R    E +  AY+ A +I+
Sbjct: 101 ILKLLDSHLVPSSTAAESKVFYLKMKGDYHRYLAEFKTGAERKEAAESTMVAYKAAQDIA 160

Query: 545 KAKMQPTHPIRLGLALNFSVFYYEILNSPDKACQLAKQAFDDAIAELDTLNEDSYKDSTL 366
            A + PTHPIRLGLALNFSVFYYEILNSPDKAC LAKQAFD+AI+ELDTL E+SYKDSTL
Sbjct: 161 LADLAPTHPIRLGLALNFSVFYYEILNSPDKACNLAKQAFDEAISELDTLGEESYKDSTL 220

Query: 365 IMQLLRDNLTLWTSD-TQGDGDEPAE 291
           IMQLLRDNLTLWTSD T+  GDE  E
Sbjct: 221 IMQLLRDNLTLWTSDLTEDGGDEVKE 246


>11_06_0036 +
           19474848-19475188,19475696-19475774,19475880-19476002,
           19476970-19477086,19477169-19477228
          Length = 239

 Score =  214 bits (522), Expect = 7e-56
 Identities = 99/142 (69%), Positives = 115/142 (80%)
 Frame = -3

Query: 725 VLGLLDKHLIPKASNPESKVFYLKMKGDYYRYLAEVATGETRHSVVEDSQKAYQDAFEIS 546
           +L LLD HL+P A   ESKVFYLKMKGDY+RYLAE  +G+ R    E +  AY+ A +I+
Sbjct: 84  ILALLDSHLVPSAGAAESKVFYLKMKGDYHRYLAEFKSGDERKQAAESTMNAYKAAQDIA 143

Query: 545 KAKMQPTHPIRLGLALNFSVFYYEILNSPDKACQLAKQAFDDAIAELDTLNEDSYKDSTL 366
            A + PTHPIRLGLALNFSVFYYEILNSPD+AC LAKQAFD+AI+ELD+L E+SYKDSTL
Sbjct: 144 LADLAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDSLGEESYKDSTL 203

Query: 365 IMQLLRDNLTLWTSDTQGDGDE 300
           IMQLLRDNLTLWTSD   DG +
Sbjct: 204 IMQLLRDNLTLWTSDANDDGGD 225


>03_05_0881 +
           28461857-28462263,28462357-28462435,28462798-28462920,
           28463632-28463748,28463861-28463917
          Length = 260

 Score =  212 bits (518), Expect = 2e-55
 Identities = 101/142 (71%), Positives = 115/142 (80%)
 Frame = -3

Query: 725 VLGLLDKHLIPKASNPESKVFYLKMKGDYYRYLAEVATGETRHSVVEDSQKAYQDAFEIS 546
           +L LLD HL+P A+  ESKVFYLKMKGDY+RYLAE  +G  R    E++  AY+ A +I+
Sbjct: 106 ILKLLDSHLVPSATAAESKVFYLKMKGDYHRYLAEFKSGAERKEAAENTLVAYKSAQDIA 165

Query: 545 KAKMQPTHPIRLGLALNFSVFYYEILNSPDKACQLAKQAFDDAIAELDTLNEDSYKDSTL 366
            A +  THPIRLGLALNFSVFYYEILNSPD+AC LAKQAFDDAIAELDTL E+SYKDSTL
Sbjct: 166 LADLPTTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDDAIAELDTLGEESYKDSTL 225

Query: 365 IMQLLRDNLTLWTSDTQGDGDE 300
           IMQLLRDNLTLWTSD   DG +
Sbjct: 226 IMQLLRDNLTLWTSDNAEDGGD 247


>08_02_1026 +
           23743186-23743686,23743793-23743915,23744734-23744850,
           23744948-23745001
          Length = 264

 Score =  208 bits (509), Expect = 3e-54
 Identities = 98/142 (69%), Positives = 116/142 (81%)
 Frame = -3

Query: 725 VLGLLDKHLIPKASNPESKVFYLKMKGDYYRYLAEVATGETRHSVVEDSQKAYQDAFEIS 546
           +L LLD+ L+P A+  ++KVFYLKMKGDY+RYLAE  TG  R    + +  AYQ A +I+
Sbjct: 111 ILRLLDERLVPAAAAVDAKVFYLKMKGDYHRYLAEFKTGAERKDAADATLAAYQAAQDIA 170

Query: 545 KAKMQPTHPIRLGLALNFSVFYYEILNSPDKACQLAKQAFDDAIAELDTLNEDSYKDSTL 366
             ++ PTHPIRLGLALNFSVFYYEILNSPD+AC LAKQAFD+AI+ELDTL E+SYKDSTL
Sbjct: 171 MKELSPTHPIRLGLALNFSVFYYEILNSPDRACTLAKQAFDEAISELDTLGEESYKDSTL 230

Query: 365 IMQLLRDNLTLWTSDTQGDGDE 300
           IMQLLRDNLTLWTSD Q DG +
Sbjct: 231 IMQLLRDNLTLWTSDMQDDGGD 252


>01_01_0767 +
           5931031-5931281,5931414-5931594,5932020-5932129,
           5932212-5932360,5932686-5932738,5933168-5933260
          Length = 278

 Score =  129 bits (312), Expect(2) = 6e-35
 Identities = 61/93 (65%), Positives = 73/93 (78%)
 Frame = -3

Query: 560 AFEISKAKMQPTHPIRLGLALNFSVFYYEILNSPDKACQLAKQAFDDAIAELDTLNEDSY 381
           A + ++  + PT PIRLGLALN SVFY EI+NSPDKACQLAK AFD+A+AEL +L+E++Y
Sbjct: 146 ASKTAQTDLTPTDPIRLGLALNISVFYCEIMNSPDKACQLAKNAFDEAVAELPSLSEENY 205

Query: 380 KDSTLIMQLLRDNLTLWTSDTQGDGDEPAEGGD 282
           KDSTLIMQLLRDNL LW SD   D D+  E  D
Sbjct: 206 KDSTLIMQLLRDNLALWNSDMADDADDIRERTD 238



 Score = 36.3 bits (80), Expect(2) = 6e-35
 Identities = 17/29 (58%), Positives = 19/29 (65%)
 Frame = -3

Query: 650 KGDYYRYLAEVATGETRHSVVEDSQKAYQ 564
           KGDYYRYLAE  TG  +  V E S  AY+
Sbjct: 85  KGDYYRYLAEFKTGTEKIEVSELSLNAYE 113


>11_06_0360 -
           22699524-22699529,22699865-22699899,22700650-22700792,
           22701165-22701220,22701367-22701454,22702737-22703037,
           22704365-22704428
          Length = 230

 Score =  110 bits (265), Expect = 1e-24
 Identities = 61/144 (42%), Positives = 91/144 (63%)
 Frame = -3

Query: 743 REIXYDVLGLLDKHLIPKASNPESKVFYLKMKGDYYRYLAEVATGETRHSVVEDSQKAYQ 564
           R +  +VL ++  H +P A++ E+ VF+ KMKGDYYRYLAE +TG  + +  + S  AYQ
Sbjct: 92  RAVCNEVLSIIAIHCLPLANSGENVVFFYKMKGDYYRYLAEFSTGTEKKAATDQSLMAYQ 151

Query: 563 DAFEISKAKMQPTHPIRLGLALNFSVFYYEILNSPDKACQLAKQAFDDAIAELDTLNEDS 384
            A+  ++                FS+   EI+NSP++A Q+AKQA D+A AE+++   + 
Sbjct: 152 -AWPCAQL---------------FSLL--EIMNSPERASQVAKQALDEATAEINSAGVEG 193

Query: 383 YKDSTLIMQLLRDNLTLWTSDTQG 312
           YKDS L+MQLL++NL LWTS+  G
Sbjct: 194 YKDSMLMMQLLKENLALWTSELTG 217


>08_01_0533 +
           4625376-4625709,4625799-4625966,4627428-4627689,
           4627787-4627934,4628453-4628496,4628812-4628859,
           4629245-4630509,4630741-4630839,4630916-4631097,
           4631186-4631246,4631488-4631725,4631818-4631971,
           4632042-4632335
          Length = 1098

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 20/78 (25%), Positives = 37/78 (47%), Gaps = 2/78 (2%)
 Frame = -3

Query: 491 SVFYYEILNSPDKACQLAKQAFDDAIAEL-DTLNEDSYKDSTLIMQLLRD-NLTLWTSDT 318
           S   Y  +  PD    + K++FD+ + E     +  +Y  S +   ++ D    LWT + 
Sbjct: 676 SFLTYPSMKVPDNFIYIHKRSFDECMVECRSNCSCVAYAYSNISSGIIDDTRCLLWTGEL 735

Query: 317 QGDGDEPAEGGDN*YLAA 264
             D ++  +GG+N Y+ A
Sbjct: 736 I-DMEKVTQGGENLYIRA 752


>04_04_1588 - 34633057-34633824
          Length = 255

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = +3

Query: 243 KCVCWGECGEILVVAALGRLVAIALSV*RPK 335
           +CVCW     +++  ALG    I  +V +PK
Sbjct: 68  RCVCWTLLAVLVLAVALGATAGILYAVFKPK 98


>04_04_1354 -
           32841778-32841983,32842079-32843093,32843184-32843518,
           32843590-32844019,32844155-32844214,32844531-32844651,
           32845321-32846132
          Length = 992

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 19/83 (22%), Positives = 35/83 (42%), Gaps = 3/83 (3%)
 Frame = +3

Query: 24  LHQVSSLSAIQCQSSNPKPSKLPQHLILXGTGRSAANDF*HFYKRRLASASVMIPRQTTF 203
           L   + LS I+C +S+ KP++   H I    G S   D    +   +   +   P +   
Sbjct: 78  LSGTTELSGIRCTTSSCKPNETILHTISTNNGTSNCQDTTQSFSLLMECTNHTTPSKPMH 137

Query: 204 SNVTRFLINT---DENKCVCWGE 263
            ++T  L++T     N C  + +
Sbjct: 138 PHITFQLMHTKIESSNSCAKYAD 160


>06_03_1237 + 28602250-28604196
          Length = 648

 Score = 27.9 bits (59), Expect = 9.0
 Identities = 17/72 (23%), Positives = 36/72 (50%)
 Frame = -3

Query: 719 GLLDKHLIPKASNPESKVFYLKMKGDYYRYLAEVATGETRHSVVEDSQKAYQDAFEISKA 540
           GL+D +      +  SKVFY   + + Y Y + +A G   H    ++   +++   +++A
Sbjct: 314 GLVDMYAKCGLIDEASKVFYGMQEKNVYTYSSMIA-GLASHGRASEAIALFKEM--VNRA 370

Query: 539 KMQPTHPIRLGL 504
            ++P H   +G+
Sbjct: 371 NVEPNHVTFIGV 382


>02_02_0106 + 6814391-6817007,6817086-6817462
          Length = 997

 Score = 27.9 bits (59), Expect = 9.0
 Identities = 19/54 (35%), Positives = 24/54 (44%), Gaps = 1/54 (1%)
 Frame = -2

Query: 231 CL*ENE*HSRTSSGAVSSPKPTRAVACKNVKSRSQRTFPFRXKL-NVVAALTVL 73
           CL +N  H   S   +SSP PT    C N+K        F  KL N + +L  L
Sbjct: 93  CLLKNLTHLDVSYNNISSPFPTMLYNCSNLKYLDLSNNAFAGKLPNDINSLPAL 146


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,795,052
Number of Sequences: 37544
Number of extensions: 378306
Number of successful extensions: 1054
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1030
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1054
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1968901276
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)