Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_pT_G10
         (749 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_07_0124 - 13085820-13085997,13086235-13086362,13086475-130865...    31   1.3  
01_06_1452 - 37457529-37458743                                         31   1.3  
08_02_1616 + 28260204-28262555                                         29   5.2  
02_02_0740 - 13581399-13581416,13581690-13581750,13582878-135829...    29   5.2  
02_05_0385 - 28506326-28506891,28506993-28507405,28507496-285077...    28   9.1  

>10_07_0124 -
           13085820-13085997,13086235-13086362,13086475-13086550,
           13086726-13086803,13086985-13087064,13087411-13087480,
           13087730-13087887,13088225-13088315,13088379-13088455,
           13088612-13088686,13088798-13089071,13089911-13090041,
           13090154-13090323,13090413-13090971,13091077-13091127
          Length = 731

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 13/44 (29%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
 Frame = -2

Query: 739 IESWYSEGETYDSKFTTLGSAXEECRXEAVGLYLSLVPE-ILKI 611
           + SWYS  E YD     +    E+C  + +G  + ++ E ++KI
Sbjct: 267 LASWYSAAENYDQPIVVVIDDLEQCSGDVLGELVMMLSEWVIKI 310


>01_06_1452 - 37457529-37458743
          Length = 404

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 5/57 (8%)
 Frame = -2

Query: 724 SEGETYD--SKFTTLGSAXEECRXEAVGLYLSL-VP--EILKIFGYEGQEAEDVTYV 569
           S+G  +D  S+  T GSA    R EAVG+  SL +P  E++ +    G  AE +T V
Sbjct: 136 SQGGVFDVLSRVVTSGSACSTAREEAVGVLASLRIPEQELIGVSTRHGNLAESLTAV 192


>08_02_1616 + 28260204-28262555
          Length = 783

 Score = 28.7 bits (61), Expect = 5.2
 Identities = 27/104 (25%), Positives = 41/104 (39%), Gaps = 6/104 (5%)
 Frame = +2

Query: 362 GSETILL*RQQEILPGLG--LLDGEQAAPLQLQQTHDHETCAGVRLQPSLSGGLVH---- 523
           G  ++L   Q+   P  G  LLDG       L+        A V  +P L    +H    
Sbjct: 563 GKSSVLALVQRFYEPNSGRVLLDGRDLRKFNLRSLR--RAMALVPQEPFLFAATIHDNIA 620

Query: 524 FGRLSGSVPQQAEPVNVCDVFGFLSFVPENFKYLWYQREVQSDG 655
           +GR   +  +  E     +   F+S +PE +  L  +R VQ  G
Sbjct: 621 YGREGATEAEVVEAATAANAHKFISALPEGYGTLVGERGVQLSG 664


>02_02_0740 -
           13581399-13581416,13581690-13581750,13582878-13582981,
           13583140-13583149,13583244-13583308
          Length = 85

 Score = 28.7 bits (61), Expect = 5.2
 Identities = 19/69 (27%), Positives = 29/69 (42%)
 Frame = +3

Query: 462 MITKRARACACNQVLVEGWYISVALAAPFHNKLSQLTYVTSSASCPSYPKILSISGTKER 641
           M+     A  C++ L++ W +S A A    N L  L +      CP +P I  +S     
Sbjct: 1   MVRATRHADTCSRKLLQ-WGLSGARAGEKFNPLPALPWSLRRCRCPYWPPIARVSTCVVV 59

Query: 642 YSPTASXRH 668
               A+ RH
Sbjct: 60  SESYATCRH 68


>02_05_0385 - 28506326-28506891,28506993-28507405,28507496-28507743,
            28507820-28508480,28508572-28509498,28509588-28509847,
            28509943-28510143,28515547-28515633,28516200-28516375,
            28516465-28516519,28516623-28516910
          Length = 1293

 Score = 27.9 bits (59), Expect = 9.1
 Identities = 22/104 (21%), Positives = 48/104 (46%), Gaps = 6/104 (5%)
 Frame = +2

Query: 362  GSETIL--L*RQQEILPGLGLLDGEQAAPLQLQQTHDHETCAGVRLQPSLSGGLVH---- 523
            G  T+L  + R  + + G  L+DG+    ++L+    H     V+ +P+L    ++    
Sbjct: 1083 GKSTVLSLILRFYDPIAGKVLIDGKDIRKVKLKSLRKH--IGLVQQEPALFATTIYDNIL 1140

Query: 524  FGRLSGSVPQQAEPVNVCDVFGFLSFVPENFKYLWYQREVQSDG 655
            +G+   +  +  +   + +   F+S +PE ++    +R VQ  G
Sbjct: 1141 YGKDGATEAEVVDAAKLANAHSFISALPEGYRTRVGERGVQLSG 1184


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,955,202
Number of Sequences: 37544
Number of extensions: 327210
Number of successful extensions: 1009
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 981
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1009
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1992480932
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)