Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P17_pT_G10
(749 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81494-14|CAJ43905.2| 745|Caenorhabditis elegans Hypothetical p... 122 4e-28
Z81494-8|CAB54212.3| 707|Caenorhabditis elegans Hypothetical pr... 122 4e-28
Z81057-7|CAJ43903.2| 745|Caenorhabditis elegans Hypothetical pr... 122 4e-28
AF003140-5|AAD47120.1| 814|Caenorhabditis elegans Hypothetical ... 30 2.0
AF003140-4|AAD47119.1| 2712|Caenorhabditis elegans Hypothetical ... 30 2.0
AF003140-3|AAM15563.1| 2710|Caenorhabditis elegans Hypothetical ... 30 2.0
U58750-3|AAB00643.2| 350|Caenorhabditis elegans Hypothetical pr... 29 2.7
AF078784-1|AAK18967.1| 458|Caenorhabditis elegans Hypothetical ... 29 4.7
AC024214-11|AAF36073.2| 117|Caenorhabditis elegans Hypothetical... 28 6.2
>Z81494-14|CAJ43905.2| 745|Caenorhabditis elegans Hypothetical
protein F02E9.9b protein.
Length = 745
Score = 122 bits (293), Expect = 4e-28
Identities = 69/161 (42%), Positives = 89/161 (55%), Gaps = 3/161 (1%)
Frame = -2
Query: 739 IESWYSEGETYDSKFTTLGSAXEECRXEAVGLYLSLVPEILKIFGYEGQEAEDVTYVNWL 560
I +WY GET+ SKF L SA EECR EAVG L +IL+IFGY G A++V YVNWL
Sbjct: 511 IATWYEPGETWSSKFGPLASAYEECRAEAVGYVLCCDADILEIFGYTGDLAQEVKYVNWL 570
Query: 559 SLLWNGAAKATEMYQPSTKTWLQAHARARFVIMR--XXXXXXXXXXXXXXXEPGK-NLLL 389
S + G A E YQ K W QAH AR+V+ + E GK +L
Sbjct: 571 SEIRAGLL-ALEFYQAEQKKWGQAHCYARYVLTKVVLEAGQGFVKIEETKGEDGKPDLHF 629
Query: 388 TLQKDRLATDGKKIIGDFLVKLQTIKATGDFSAGEKLFNKY 266
L ++ + + G+ + FL KLQ K+TGDF G++LF Y
Sbjct: 630 KLDRNLIDSVGRPAVNTFLAKLQAYKSTGDFEGGKRLFESY 670
Score = 58.0 bits (134), Expect = 7e-09
Identities = 25/67 (37%), Positives = 41/67 (61%)
Frame = -3
Query: 237 WRDIVLMHKQPRNIFVQPNTFHKGDAVELKRYPATAEGMVASWVDRFPNTKVDDILEKLA 58
WRDI + ++PR +FVQPNT K + L Y + G++ S+V+R+ + V+D L
Sbjct: 680 WRDICIARRKPRRLFVQPNTVEKNGEISLVTYSSDVSGVIQSFVERYEKSAVED-LYACW 738
Query: 57 KENSKYF 37
K++ K+F
Sbjct: 739 KDDQKWF 745
>Z81494-8|CAB54212.3| 707|Caenorhabditis elegans Hypothetical
protein F02E9.9a protein.
Length = 707
Score = 122 bits (293), Expect = 4e-28
Identities = 69/161 (42%), Positives = 89/161 (55%), Gaps = 3/161 (1%)
Frame = -2
Query: 739 IESWYSEGETYDSKFTTLGSAXEECRXEAVGLYLSLVPEILKIFGYEGQEAEDVTYVNWL 560
I +WY GET+ SKF L SA EECR EAVG L +IL+IFGY G A++V YVNWL
Sbjct: 473 IATWYEPGETWSSKFGPLASAYEECRAEAVGYVLCCDADILEIFGYTGDLAQEVKYVNWL 532
Query: 559 SLLWNGAAKATEMYQPSTKTWLQAHARARFVIMR--XXXXXXXXXXXXXXXEPGK-NLLL 389
S + G A E YQ K W QAH AR+V+ + E GK +L
Sbjct: 533 SEIRAGLL-ALEFYQAEQKKWGQAHCYARYVLTKVVLEAGQGFVKIEETKGEDGKPDLHF 591
Query: 388 TLQKDRLATDGKKIIGDFLVKLQTIKATGDFSAGEKLFNKY 266
L ++ + + G+ + FL KLQ K+TGDF G++LF Y
Sbjct: 592 KLDRNLIDSVGRPAVNTFLAKLQAYKSTGDFEGGKRLFESY 632
Score = 58.0 bits (134), Expect = 7e-09
Identities = 25/67 (37%), Positives = 41/67 (61%)
Frame = -3
Query: 237 WRDIVLMHKQPRNIFVQPNTFHKGDAVELKRYPATAEGMVASWVDRFPNTKVDDILEKLA 58
WRDI + ++PR +FVQPNT K + L Y + G++ S+V+R+ + V+D L
Sbjct: 642 WRDICIARRKPRRLFVQPNTVEKNGEISLVTYSSDVSGVIQSFVERYEKSAVED-LYACW 700
Query: 57 KENSKYF 37
K++ K+F
Sbjct: 701 KDDQKWF 707
>Z81057-7|CAJ43903.2| 745|Caenorhabditis elegans Hypothetical
protein F02E9.9b protein.
Length = 745
Score = 122 bits (293), Expect = 4e-28
Identities = 69/161 (42%), Positives = 89/161 (55%), Gaps = 3/161 (1%)
Frame = -2
Query: 739 IESWYSEGETYDSKFTTLGSAXEECRXEAVGLYLSLVPEILKIFGYEGQEAEDVTYVNWL 560
I +WY GET+ SKF L SA EECR EAVG L +IL+IFGY G A++V YVNWL
Sbjct: 511 IATWYEPGETWSSKFGPLASAYEECRAEAVGYVLCCDADILEIFGYTGDLAQEVKYVNWL 570
Query: 559 SLLWNGAAKATEMYQPSTKTWLQAHARARFVIMR--XXXXXXXXXXXXXXXEPGK-NLLL 389
S + G A E YQ K W QAH AR+V+ + E GK +L
Sbjct: 571 SEIRAGLL-ALEFYQAEQKKWGQAHCYARYVLTKVVLEAGQGFVKIEETKGEDGKPDLHF 629
Query: 388 TLQKDRLATDGKKIIGDFLVKLQTIKATGDFSAGEKLFNKY 266
L ++ + + G+ + FL KLQ K+TGDF G++LF Y
Sbjct: 630 KLDRNLIDSVGRPAVNTFLAKLQAYKSTGDFEGGKRLFESY 670
Score = 58.0 bits (134), Expect = 7e-09
Identities = 25/67 (37%), Positives = 41/67 (61%)
Frame = -3
Query: 237 WRDIVLMHKQPRNIFVQPNTFHKGDAVELKRYPATAEGMVASWVDRFPNTKVDDILEKLA 58
WRDI + ++PR +FVQPNT K + L Y + G++ S+V+R+ + V+D L
Sbjct: 680 WRDICIARRKPRRLFVQPNTVEKNGEISLVTYSSDVSGVIQSFVERYEKSAVED-LYACW 738
Query: 57 KENSKYF 37
K++ K+F
Sbjct: 739 KDDQKWF 745
>AF003140-5|AAD47120.1| 814|Caenorhabditis elegans Hypothetical
protein C44E4.1b protein.
Length = 814
Score = 29.9 bits (64), Expect = 2.0
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = -2
Query: 337 FLVKLQTIKATGDFSAGEKLFNKYSSLDEPLGPLER 230
FL++++ A DF G N Y+S D +GPL R
Sbjct: 14 FLIQIEKDIAQEDFLQGRMTHNPYNSSDPGMGPLMR 49
>AF003140-4|AAD47119.1| 2712|Caenorhabditis elegans Hypothetical
protein C44E4.1a protein.
Length = 2712
Score = 29.9 bits (64), Expect = 2.0
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = -2
Query: 337 FLVKLQTIKATGDFSAGEKLFNKYSSLDEPLGPLER 230
FL++++ A DF G N Y+S D +GPL R
Sbjct: 1912 FLIQIEKDIAQEDFLQGRMTHNPYNSSDPGMGPLMR 1947
>AF003140-3|AAM15563.1| 2710|Caenorhabditis elegans Hypothetical
protein C44E4.1c protein.
Length = 2710
Score = 29.9 bits (64), Expect = 2.0
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = -2
Query: 337 FLVKLQTIKATGDFSAGEKLFNKYSSLDEPLGPLER 230
FL++++ A DF G N Y+S D +GPL R
Sbjct: 1912 FLIQIEKDIAQEDFLQGRMTHNPYNSSDPGMGPLMR 1947
>U58750-3|AAB00643.2| 350|Caenorhabditis elegans Hypothetical
protein F55G1.6 protein.
Length = 350
Score = 29.5 bits (63), Expect = 2.7
Identities = 17/45 (37%), Positives = 23/45 (51%)
Frame = +2
Query: 482 GVRLQPSLSGGLVHFGRLSGSVPQQAEPVNVCDVFGFLSFVPENF 616
G +L+P L HFG L + +QA + C V F +F P NF
Sbjct: 134 GYKLKPCFCRKLFHFGCLRSLIEEQAS-CSECSVI-FSAFKPANF 176
>AF078784-1|AAK18967.1| 458|Caenorhabditis elegans Hypothetical
protein H34I24.2 protein.
Length = 458
Score = 28.7 bits (61), Expect = 4.7
Identities = 13/32 (40%), Positives = 15/32 (46%)
Frame = -3
Query: 603 TKDKKPKTSHTLTGSACCGTEPLRRPKCTNPP 508
T P + TGS C + L RP CTN P
Sbjct: 263 TTTPNPCLAFNCTGSGPCQLDSLNRPYCTNCP 294
>AC024214-11|AAF36073.2| 117|Caenorhabditis elegans Hypothetical
protein Y77E11A.3 protein.
Length = 117
Score = 28.3 bits (60), Expect = 6.2
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = -1
Query: 398 SPVDATKGSSRYRRQEDHWRFLGETSNDKGN 306
S ++ K R+ R+E W FLG+ + GN
Sbjct: 16 SEKNSEKAHKRFSREEHEWSFLGQQQFNAGN 46
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,053,033
Number of Sequences: 27780
Number of extensions: 266941
Number of successful extensions: 877
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 796
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 868
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1777507862
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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