Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_pT_G09
         (609 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory recept...    22   4.6  
AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory recept...    22   4.6  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    22   4.6  
L01616-1|AAA30096.1|   74|Tribolium castaneum zinc finger protei...    21   8.1  
AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate neu...    21   8.1  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    21   8.1  

>AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory receptor
           candidate 62 protein.
          Length = 320

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 13/40 (32%), Positives = 19/40 (47%)
 Frame = -3

Query: 553 SLLQNIXH*YLNVIFNLLR*RPIVRAILFYLYFQVSQFIV 434
           ++L  + H Y  V+F LL     V+   F      SQFI+
Sbjct: 107 NVLFQLIHVYYTVVFTLLLGVDFVKEYAFEYIQLYSQFIL 146


>AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory receptor
           candidate 37 protein.
          Length = 331

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 13/40 (32%), Positives = 19/40 (47%)
 Frame = -3

Query: 553 SLLQNIXH*YLNVIFNLLR*RPIVRAILFYLYFQVSQFIV 434
           ++L  + H Y  V+F LL     V+   F      SQFI+
Sbjct: 107 NVLFQLIHVYYTVVFTLLLGVDFVKEYAFEYIQLYSQFIL 146


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 13/40 (32%), Positives = 19/40 (47%)
 Frame = -3

Query: 553 SLLQNIXH*YLNVIFNLLR*RPIVRAILFYLYFQVSQFIV 434
           ++L  + H Y  V+F LL     V+   F      SQFI+
Sbjct: 427 NVLFQLIHVYYTVVFTLLLGVDFVKEYAFEYIQLYSQFIL 466


>L01616-1|AAA30096.1|   74|Tribolium castaneum zinc finger protein
          protein.
          Length = 74

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = +2

Query: 26 HNRISQNNYLFTHKSKHT 79
          H R +++++L TH   HT
Sbjct: 16 HKRFTRDHHLKTHMRLHT 33


>AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate
          neuroblasts defectiveprotein protein.
          Length = 224

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = +2

Query: 35 ISQNNYLFTH 64
          ++QNN LFTH
Sbjct: 52 LAQNNQLFTH 61


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = +2

Query: 26  HNRISQNNYLFTHKSKHT 79
           H R +++++L TH   HT
Sbjct: 169 HKRFTRDHHLKTHMRLHT 186


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 136,757
Number of Sequences: 336
Number of extensions: 2991
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15457268
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)