Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_pT_G07
         (440 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U15956-1|AAA67444.1|  129|Apis mellifera hymenoptaecin precursor...    27   0.12 
L10430-1|AAA27731.1|  150|Apis mellifera transposase protein.          25   0.37 
AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase pr...    25   0.37 
U70841-1|AAC47455.1|  377|Apis mellifera ultraviolet sensitive o...    22   2.6  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    22   2.6  
AF004168-1|AAC13417.1|  377|Apis mellifera blue-sensitive opsin ...    22   2.6  
DQ026034-1|AAY87893.1|  569|Apis mellifera nicotinic acetylcholi...    21   6.0  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                21   7.9  

>U15956-1|AAA67444.1|  129|Apis mellifera hymenoptaecin precursor
           protein.
          Length = 129

 Score = 26.6 bits (56), Expect = 0.12
 Identities = 11/20 (55%), Positives = 15/20 (75%)
 Frame = -3

Query: 354 MKFTVMIVLMALAYVSAHKE 295
           MKF V+++  A+AYVSA  E
Sbjct: 1   MKFIVLVLFCAVAYVSAQAE 20


>L10430-1|AAA27731.1|  150|Apis mellifera transposase protein.
          Length = 150

 Score = 25.0 bits (52), Expect = 0.37
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = +3

Query: 30 WLIFNNISRVRRW 68
          W+++NNI R R W
Sbjct: 35 WVVYNNIKRKRSW 47


>AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase
           protein.
          Length = 342

 Score = 25.0 bits (52), Expect = 0.37
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = +3

Query: 30  WLIFNNISRVRRW 68
           W+++NNI R R W
Sbjct: 156 WVVYNNIKRKRSW 168


>U70841-1|AAC47455.1|  377|Apis mellifera ultraviolet sensitive
           opsin protein.
          Length = 377

 Score = 22.2 bits (45), Expect = 2.6
 Identities = 8/21 (38%), Positives = 10/21 (47%)
 Frame = -3

Query: 123 WTRYKRQGIVNECCFKPCTTD 61
           W RY  +G +  C F   T D
Sbjct: 194 WGRYTTEGFLTTCSFDFLTDD 214


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
            protein.
          Length = 1370

 Score = 22.2 bits (45), Expect = 2.6
 Identities = 10/41 (24%), Positives = 19/41 (46%)
 Frame = -3

Query: 306  AHKEAVTLCGRNLANARVAVCYGAEYVDKRTSGNTLFDDFE 184
            A+++AVT+ G NL      V  G+    +R     ++   +
Sbjct: 1299 AYRDAVTVPGNNLIATNTTVSSGSSEDHRRPLSEHIYSSID 1339


>AF004168-1|AAC13417.1|  377|Apis mellifera blue-sensitive opsin
           protein.
          Length = 377

 Score = 22.2 bits (45), Expect = 2.6
 Identities = 8/21 (38%), Positives = 10/21 (47%)
 Frame = -3

Query: 123 WTRYKRQGIVNECCFKPCTTD 61
           W RY  +G +  C F   T D
Sbjct: 194 WGRYTTEGFLTTCSFDFLTDD 214


>DQ026034-1|AAY87893.1|  569|Apis mellifera nicotinic acetylcholine
           receptor alpha4subunit protein.
          Length = 569

 Score = 21.0 bits (42), Expect = 6.0
 Identities = 10/43 (23%), Positives = 20/43 (46%)
 Frame = -3

Query: 435 EFGRPMITHL*SSHCSTSEIIIQEIFNMKFTVMIVLMALAYVS 307
           E+G   + H+ S H    +I++    +  + V ++  A  Y S
Sbjct: 96  EYGGVKMLHVPSDHIWRPDIVLYNNADGNYEVTLMTKATVYYS 138


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 6/16 (37%), Positives = 11/16 (68%)
 Frame = +1

Query: 325 HQHYHHREFHVKNLLY 372
           H H+HH+   +++L Y
Sbjct: 351 HHHHHHQTQSLQHLHY 366


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 120,725
Number of Sequences: 438
Number of extensions: 2360
Number of successful extensions: 14
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 11450997
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)