Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_pT_G06
         (744 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.     23   3.0  
AF393495-1|AAL60420.1|  136|Apis mellifera odorant binding prote...    22   7.0  
AF393492-1|AAL60417.1|  136|Apis mellifera odorant binding prote...    22   7.0  
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    21   9.2  

>AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.
          Length = 388

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = -3

Query: 250 FPEKLRLSSKLASCGELKTRWSVN 179
           FP++     K +  G L+TRWS++
Sbjct: 147 FPQEFFPECKWSRKGFLRTRWSIS 170


>AF393495-1|AAL60420.1|  136|Apis mellifera odorant binding protein
           ASP4 protein.
          Length = 136

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 8/25 (32%), Positives = 16/25 (64%)
 Frame = -3

Query: 511 DNCQLSREEPDCPL*KAEYILNTLD 437
           D C ++R+  DC L K +++ + L+
Sbjct: 107 DECMVARKYIDCALEKMKFLDDELE 131


>AF393492-1|AAL60417.1|  136|Apis mellifera odorant binding protein
           ASP4 protein.
          Length = 136

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 8/25 (32%), Positives = 16/25 (64%)
 Frame = -3

Query: 511 DNCQLSREEPDCPL*KAEYILNTLD 437
           D C ++R+  DC L K +++ + L+
Sbjct: 107 DECMVARKYIDCALEKMKFLDDELE 131


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = -3

Query: 253 IFPEKLRLSSKLASCGELKTR 191
           IF EKLRL +K     + KT+
Sbjct: 502 IFAEKLRLETKELFSSQQKTK 522


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 193,925
Number of Sequences: 438
Number of extensions: 3786
Number of successful extensions: 11
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23266665
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)