Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_pT_G04
         (687 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_02_1547 + 27795664-27795674,27795743-27795892,27796182-277979...    28   8.0  

>08_02_1547 +
           27795664-27795674,27795743-27795892,27796182-27797906,
           27799447-27799546,27799657-27800268,27800399-27800521,
           27800905-27801039,27801108-27801209,27801716-27801778,
           27801854-27802045,27802121-27802258,27802632-27802694,
           27803068-27803466
          Length = 1270

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 9/25 (36%), Positives = 16/25 (64%)
 Frame = +3

Query: 366 YFPCALKRLLCSCKQMKCKRIQTIH 440
           Y   +LK + C+CK+M+C+ +   H
Sbjct: 446 YVESSLKNMSCTCKKMECESLPCQH 470


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,504,372
Number of Sequences: 37544
Number of extensions: 253082
Number of successful extensions: 349
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 347
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 349
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1744894544
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)