Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_pT_G02
         (468 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF283275-1|AAG15376.1|  133|Anopheles gambiae small heat shock p...   100   3e-23
AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript...    24   2.3  
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript...    23   4.0  
AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript...    23   5.3  
AF487536-1|AAL93297.1|  504|Anopheles gambiae cytochrome P450 CY...    23   7.0  
M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ...    22   9.3  
AJ441131-2|CAD29631.1|  208|Anopheles gambiae hypothetical prote...    22   9.3  
AJ439398-1|CAD28124.1|  208|Anopheles gambiae hypothetical prote...    22   9.3  
AJ439061-1|CAD27770.1|   89|Anopheles gambiae hypothetical prote...    22   9.3  

>AF283275-1|AAG15376.1|  133|Anopheles gambiae small heat shock
           protein protein.
          Length = 133

 Score =  100 bits (239), Expect = 3e-23
 Identities = 46/104 (44%), Positives = 71/104 (68%), Gaps = 3/104 (2%)
 Frame = -3

Query: 400 HD-GNIVKTQKDRLEINLLVKDFAAEQIQVKVADDFIVIEAKHEEKKDEQGFISRHFVRK 224
           HD G+ V   KD+ +INL V+ F+ E+I VK  D+ +++E KHEEK+D+ G++SRHFVR+
Sbjct: 2   HDSGSAVNISKDKFQINLDVQQFSPEEISVKYVDNCVLVEGKHEEKQDDHGYVSRHFVRR 61

Query: 223 YKLPQGSQPNKITSTLSADGVLKIVVPKETAVLK--DTAIPVAY 98
           Y LP+G     I S+LS+DG+L I  P++    K  + +IP+ +
Sbjct: 62  YMLPKGHNEADIVSSLSSDGILTITCPRKEIEQKNEERSIPITH 105


>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 24.2 bits (50), Expect = 2.3
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = -3

Query: 217 LPQGSQPNKITSTLSADGVLKIVVPKETAVL 125
           +PQGS        +  DGVL+I +P E  V+
Sbjct: 645 VPQGSILGPTLWNVMYDGVLRIPLPDEAKVI 675


>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1154

 Score = 23.4 bits (48), Expect = 4.0
 Identities = 9/21 (42%), Positives = 15/21 (71%)
 Frame = +3

Query: 294  IKSSATFT*ICSAAKSLTSKL 356
            ++S   ++ +C AAK +TSKL
Sbjct: 997  LQSPTNWSNVCEAAKRITSKL 1017


>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1222

 Score = 23.0 bits (47), Expect = 5.3
 Identities = 10/31 (32%), Positives = 18/31 (58%)
 Frame = -3

Query: 217 LPQGSQPNKITSTLSADGVLKIVVPKETAVL 125
           +PQGS        +  DGVL++ +P+  +V+
Sbjct: 632 VPQGSILGPTLWNIMYDGVLRVELPEGASVI 662


>AF487536-1|AAL93297.1|  504|Anopheles gambiae cytochrome P450
           CYP6Y1 protein.
          Length = 504

 Score = 22.6 bits (46), Expect = 7.0
 Identities = 7/26 (26%), Positives = 14/26 (53%)
 Frame = +1

Query: 97  RMPQVSQYLSKQPFLLAPLFSTHHQP 174
           R+P     L +   ++ P+++ HH P
Sbjct: 385 RLPDSGLLLRRGQKIMIPIYAMHHDP 410


>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
           gambiae RT2 retroposon. ).
          Length = 1222

 Score = 22.2 bits (45), Expect = 9.3
 Identities = 13/44 (29%), Positives = 21/44 (47%)
 Frame = -3

Query: 256 QGFISRHFVRKYKLPQGSQPNKITSTLSADGVLKIVVPKETAVL 125
           +G + RH      +PQGS        +  DGVL + +P +  V+
Sbjct: 675 EGPVVRHVTAG--VPQGSILGPTLWNIMYDGVLDVPLPPDVEVI 716


>AJ441131-2|CAD29631.1|  208|Anopheles gambiae hypothetical protein
           protein.
          Length = 208

 Score = 22.2 bits (45), Expect = 9.3
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = -3

Query: 301 DFIVIEAKHEEKKDEQGFISR 239
           D + + A+H E   E GF+ R
Sbjct: 16  DVLPVPAEHREHLHESGFVRR 36


>AJ439398-1|CAD28124.1|  208|Anopheles gambiae hypothetical protein
           protein.
          Length = 208

 Score = 22.2 bits (45), Expect = 9.3
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = -3

Query: 301 DFIVIEAKHEEKKDEQGFISR 239
           D + + A+H E   E GF+ R
Sbjct: 16  DVLPVPAEHREHLHESGFVRR 36


>AJ439061-1|CAD27770.1|   89|Anopheles gambiae hypothetical protein
           protein.
          Length = 89

 Score = 22.2 bits (45), Expect = 9.3
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = -3

Query: 301 DFIVIEAKHEEKKDEQGFISR 239
           D + + A+H E   E GF+ R
Sbjct: 16  DVLPVPAEHREHLHESGFVRR 36


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 461,717
Number of Sequences: 2352
Number of extensions: 7597
Number of successful extensions: 23
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 40820256
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)