Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P17_pT_F23
(661 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl cis-... 31 0.15
SPBC3D6.09 |dpb4||DNA polymerase epsilon subunit Dpb4 |Schizosac... 30 0.34
SPAC144.09c |sfc2||RNA polymerase III transcription factor TFIII... 29 0.59
SPCC4G3.09c |gyp3||GTPase activating protein Gyp3|Schizosaccharo... 29 0.78
SPCC1840.12 ||SPCC965.02|OPT oligopeptide transporter family|Sch... 28 1.0
SPBC1198.04c |zas1||zinc finger protein Zas1|Schizosaccharomyces... 27 2.4
SPBC2D10.17 |clr1||cryptic loci regulator Clr1|Schizosaccharomyc... 27 2.4
SPCC1620.14c |snf22|SPCC830.01c|ATP-dependent DNA helicase Snf22... 26 4.2
SPAC27D7.14c |tpr1|SPAC637.02c|RNA polymerase II associated Paf1... 26 4.2
SPAC22E12.04 |ccs1|pccs, pccs|metallochaperone Ccs1 |Schizosacch... 26 4.2
SPAC27F1.06c |||FKBP-type peptidyl-prolyl cis-trans isomerase |S... 25 7.3
SPBC18H10.07 |||WW domain-binding protein 4 |Schizosaccharomyces... 25 7.3
SPAC4G8.12c |||alpha-1,2-mannosyltransferase |Schizosaccharomyce... 25 9.7
SPCC4E9.02 |cig1|SPCC645.01|cyclin Cig1|Schizosaccharomyces pomb... 25 9.7
SPAP27G11.14c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 25 9.7
SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch... 25 9.7
SPCC550.13 |dfp1|rad35, him1|Hsk1-Dfp1 kinase complex regulatory... 25 9.7
SPAC11D3.18c |||nicotinic acid plasma membrane transporter |Schi... 25 9.7
SPBC725.08 |||transcription factor |Schizosaccharomyces pombe|ch... 25 9.7
SPBC4C3.06 |||actin cytoskeletal protein Syp1|Schizosaccharomyce... 25 9.7
>SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl
cis-trans isomerase Cyp7|Schizosaccharomyces pombe|chr
2|||Manual
Length = 463
Score = 31.1 bits (67), Expect = 0.15
Identities = 15/31 (48%), Positives = 17/31 (54%), Gaps = 3/31 (9%)
Frame = -1
Query: 601 DVDDGNYNSKFKQTPCS---IPGCKHIADTL 518
DV D Y SK + TPCS +PGC D L
Sbjct: 377 DVMDSQYGSKIEDTPCSLHNVPGCFSCFDRL 407
>SPBC3D6.09 |dpb4||DNA polymerase epsilon subunit Dpb4
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 210
Score = 29.9 bits (64), Expect = 0.34
Identities = 22/89 (24%), Positives = 42/89 (47%), Gaps = 3/89 (3%)
Frame = -1
Query: 331 NTADRLDHCVREHRIPKDFR-FERQKKDKN-KMPNAMDVDEAKSNKFHLNNSKQKTFSKN 158
N D +++ + K +E K+K K+PN DVD K K +++ K+
Sbjct: 78 NALDEIEYPEFSKTLKKHLEAYELALKEKRLKLPNVSDVDNRKKAKIDAHDTTPLDEEKD 137
Query: 157 KYAGKKFTSD-KKSRDETNMDCSMEDLKD 74
+ ++ D ++ E N+D +EDL++
Sbjct: 138 ELEEERIAEDIAQNEVEQNID-DVEDLEE 165
>SPAC144.09c |sfc2||RNA polymerase III transcription factor
TFIIIA|Schizosaccharomyces pombe|chr 1|||Manual
Length = 374
Score = 29.1 bits (62), Expect = 0.59
Identities = 16/67 (23%), Positives = 30/67 (44%)
Frame = -1
Query: 508 ENHYNATHRYSCAQCKKVLPSPHFLDLHIQENHDSYFAVMAEKKPSYCCYIEECKQKFNN 329
+NH H SC+ C + + L H+ + + E++ +Y C +E CK+ F
Sbjct: 195 QNHIREAHVPSCSICGRQFKTAAHLRHHVVLHQTTL-----EERKTYHCPMEGCKKSFTR 249
Query: 328 TADRLDH 308
++ H
Sbjct: 250 SSALKKH 256
Score = 25.0 bits (52), Expect = 9.7
Identities = 10/35 (28%), Positives = 16/35 (45%)
Frame = -1
Query: 589 GNYNSKFKQTPCSIPGCKHIADTLLDYENHYNATH 485
G+ + ++ CS P C + L D H N+ H
Sbjct: 340 GHGYKEAREYSCSFPECNYRFKRLYDMHRHLNSHH 374
>SPCC4G3.09c |gyp3||GTPase activating protein
Gyp3|Schizosaccharomyces pombe|chr 3|||Manual
Length = 635
Score = 28.7 bits (61), Expect = 0.78
Identities = 17/55 (30%), Positives = 28/55 (50%)
Frame = -1
Query: 283 KDFRFERQKKDKNKMPNAMDVDEAKSNKFHLNNSKQKTFSKNKYAGKKFTSDKKS 119
KD R+K K + +A ++ + S+K HL+ S + FSK+ + KKS
Sbjct: 581 KDIERRREKVAKKRNSSASKLEMSDSSKHHLSRSSSR-FSKSHIISQLHNHLKKS 634
>SPCC1840.12 ||SPCC965.02|OPT oligopeptide transporter
family|Schizosaccharomyces pombe|chr 3|||Manual
Length = 791
Score = 28.3 bits (60), Expect = 1.0
Identities = 15/62 (24%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Frame = -1
Query: 289 IPKDFRFERQKKDKNKMPNAMDVDEAKSNKFHLNNSKQKTFSKNKYAG-KKFTSDKKSRD 113
+ + F+ K +N + ++ ++KFH + ++K+F YAG +KF D R+
Sbjct: 10 VTRGFKGLESKSVENNKDHIVENSSPIASKFHEFDEQKKSFEIINYAGHEKFVDDITERE 69
Query: 112 ET 107
+
Sbjct: 70 SS 71
>SPBC1198.04c |zas1||zinc finger protein Zas1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 897
Score = 27.1 bits (57), Expect = 2.4
Identities = 15/74 (20%), Positives = 31/74 (41%), Gaps = 4/74 (5%)
Frame = -1
Query: 556 CSIPGCKHIADTLLDYENHYNATHR----YSCAQCKKVLPSPHFLDLHIQENHDSYFAVM 389
C+ P C + T ++ + TH +SC+ C + L+ H+Q+ H +
Sbjct: 28 CTYPDCPK-SFTRKEHLRRHERTHENVKAFSCSFCNRAFARSDVLNRHVQQMHLQKQNLS 86
Query: 388 AEKKPSYCCYIEEC 347
+ + C++ C
Sbjct: 87 ERRMLNASCFLGFC 100
>SPBC2D10.17 |clr1||cryptic loci regulator Clr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1238
Score = 27.1 bits (57), Expect = 2.4
Identities = 29/112 (25%), Positives = 44/112 (39%), Gaps = 8/112 (7%)
Frame = -1
Query: 556 CSIPGCKHIADTLLDYENHYNATHR-YSC-------AQCKKVLPSPHFLDLHIQENHDSY 401
C GC +L ++ H H SC A C VLPS F ++H++ + ++
Sbjct: 1002 CQWEGCLANLHSLENFIKHVLLLHHPKSCSVVKCLWASCDMVLPSEEF-EMHLRGHLNNI 1060
Query: 400 FAVMAEKKPSYCCYIEECKQKFNNTADRLDHCVREHRIPKDFRFERQKKDKN 245
C + CK+ F+N D H H +P F E K +N
Sbjct: 1061 ---------RLNCEVSNCKKCFSNYEDMFKHLQHSH-LPFKFTPESFIKIRN 1102
>SPCC1620.14c |snf22|SPCC830.01c|ATP-dependent DNA helicase
Snf22|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1680
Score = 26.2 bits (55), Expect = 4.2
Identities = 18/63 (28%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Frame = -1
Query: 301 REHRIPKDFRFERQKKDKNK-MPNAMDVDEAKSNKFHLNNSKQKTFSKNKYAGKKFTSDK 125
R H++ + F F R KKD K +P+ ++ K K L+ + K + + K G F +
Sbjct: 1084 RLHKVLRPFLFRRLKKDVEKELPDKVE----KVIKCPLSGLQLKLYQQMKKHGMLFVDGE 1139
Query: 124 KSR 116
K +
Sbjct: 1140 KGK 1142
>SPAC27D7.14c |tpr1|SPAC637.02c|RNA polymerase II associated Paf1
complex subunit Tpr1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1039
Score = 26.2 bits (55), Expect = 4.2
Identities = 17/92 (18%), Positives = 37/92 (40%)
Frame = -1
Query: 358 IEECKQKFNNTADRLDHCVREHRIPKDFRFERQKKDKNKMPNAMDVDEAKSNKFHLNNSK 179
I+ K+K A+ + + + ERQK + + +A + L++ +
Sbjct: 876 IQREKEKARRLAEEEALLKEKQERERQLQEERQKMQEEVLEWRKSQQKASEDDMSLSDDE 935
Query: 178 QKTFSKNKYAGKKFTSDKKSRDETNMDCSMED 83
+K K K +K K ++ ++ S +D
Sbjct: 936 EKQSGKKKKKDRKKRKSKSKQESSDSGVSEDD 967
>SPAC22E12.04 |ccs1|pccs, pccs|metallochaperone Ccs1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 297
Score = 26.2 bits (55), Expect = 4.2
Identities = 13/51 (25%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Frame = +1
Query: 349 ILLCSSNTKVSFRPSQQNTNRGSPVCAGLRNAAKAEPSCI--ERTSTCASR 495
I C+ + + ++ N GS C+ ++ +PSC E+ S C+S+
Sbjct: 201 ICACTGKSLWTEHAELKSVNEGSSCCSKKDSSPSEKPSCCSQEKKSCCSSK 251
>SPAC27F1.06c |||FKBP-type peptidyl-prolyl cis-trans isomerase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 362
Score = 25.4 bits (53), Expect = 7.3
Identities = 18/70 (25%), Positives = 34/70 (48%)
Frame = -1
Query: 325 ADRLDHCVREHRIPKDFRFERQKKDKNKMPNAMDVDEAKSNKFHLNNSKQKTFSKNKYAG 146
A++ + + E +PKD E+ KDK K ++ K +++S K + AG
Sbjct: 182 AEQAEEEILEKPVPKDEVAEKHSKDKLKKE-----EKEKKTAVDVSDSVNGKKRKTEPAG 236
Query: 145 KKFTSDKKSR 116
+ ++KKS+
Sbjct: 237 EGEQTEKKSK 246
>SPBC18H10.07 |||WW domain-binding protein 4 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 224
Score = 25.4 bits (53), Expect = 7.3
Identities = 27/113 (23%), Positives = 47/113 (41%), Gaps = 7/113 (6%)
Frame = -1
Query: 424 IQENHDSYFAVMAEKKPSYCCYIEECKQKFNNTADRLDHC-VREHR--IPKD----FRFE 266
I H SY + K+ EE K+ N + L ++ +R I K+ F F
Sbjct: 116 ISTTHTSYIPTLLAKQEEN----EETKETTTNKNESLPGTSLKRNREIIEKEERSSFHFR 171
Query: 265 RQKKDKNKMPNAMDVDEAKSNKFHLNNSKQKTFSKNKYAGKKFTSDKKSRDET 107
+ K+ +K+P + + KS + +N + F K K + S K D++
Sbjct: 172 VKPKNLDKVPKLAENEGNKSLESKESNENKVVFKKKKSGKLRTKSSLKEYDQS 224
>SPAC4G8.12c |||alpha-1,2-mannosyltransferase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 533
Score = 25.0 bits (52), Expect = 9.7
Identities = 26/121 (21%), Positives = 50/121 (41%), Gaps = 2/121 (1%)
Frame = +3
Query: 3 MILLNCKXNAIIFFYERIIH--FGKLSFKSSIEQSIFVSSLDFLSLVNFFPAYXXXXXXX 176
++ LN + +A++ + + F +F +SIE F ++ FLS +N P
Sbjct: 113 IVPLNARWSALLLYSSSFMATTFQTHTFTNSIETIFFFLTILFLSKLNSVPLNKKISYLY 172
Query: 177 XXXXXKWNLLDLASSTSIALGILFLSFFCLSKRKSLGILCSRTQWSNLSAVLLNFCLHSS 356
LL + S I FL+ F ++ + C + +N + L+ C+ S
Sbjct: 173 TF------LLAIVSVLGFFTRITFLA-FVIAPYIYFSVRCFKKNVNNPKDIFLHLCIFVS 225
Query: 357 M 359
+
Sbjct: 226 V 226
>SPCC4E9.02 |cig1|SPCC645.01|cyclin Cig1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 415
Score = 25.0 bits (52), Expect = 9.7
Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = -1
Query: 559 PCSIPGCKHIADTLLDYENHYNATHR-YSCAQCKKVLPSPH 440
PC+I I + L+D NH+NA +R YS + K+V H
Sbjct: 372 PCAII----IMECLVDAPNHHNAIYRKYSENRMKRVSAFAH 408
>SPAP27G11.14c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 689
Score = 25.0 bits (52), Expect = 9.7
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +1
Query: 337 ISVYILLCSSNTKVSFRPSQQNTN 408
I + +L ++N KVSF+ S NTN
Sbjct: 169 IRIASILSNANDKVSFKESSINTN 192
>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
Y|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1002
Score = 25.0 bits (52), Expect = 9.7
Identities = 21/75 (28%), Positives = 29/75 (38%), Gaps = 5/75 (6%)
Frame = -1
Query: 295 HRIPKDFRFERQKKDK--NKMPNAMDVDEAKSNKFHLNNSKQKTFSKNKYAGKKFTSDKK 122
H+ PKD + KDK +K P + + +K H K K K + K+
Sbjct: 365 HKGPKDKEHHKGPKDKEHHKGPKDKEHHKGPKDKEHHKGPKDKEHHKGPKDKEHHQGPKE 424
Query: 121 ---SRDETNMDCSME 86
R E NM S E
Sbjct: 425 KHNERPEQNMQSSHE 439
>SPCC550.13 |dfp1|rad35, him1|Hsk1-Dfp1 kinase complex regulatory
subunit Dfp1 |Schizosaccharomyces pombe|chr 3|||Manual
Length = 545
Score = 25.0 bits (52), Expect = 9.7
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = -1
Query: 394 VMAEKKPSYCCYIEECKQKFNN 329
+ + KP YC E C++KF+N
Sbjct: 490 IRVDAKPGYC---ENCREKFDN 508
>SPAC11D3.18c |||nicotinic acid plasma membrane transporter
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 498
Score = 25.0 bits (52), Expect = 9.7
Identities = 15/52 (28%), Positives = 29/52 (55%)
Frame = +2
Query: 125 LVACEFLSCIFIFAKRLLFAIVQMEFIGLSLVYVHSVRHFVFILFLSFKTKI 280
+V F S + + K L F +Q ++ + VY+ V F+F+ +LS +T++
Sbjct: 301 MVLYGFSSFLPVIIKGLGFVGLQTNYMTIP-VYIAGVISFLFVAWLSDRTQL 351
>SPBC725.08 |||transcription factor |Schizosaccharomyces pombe|chr
2|||Manual
Length = 609
Score = 25.0 bits (52), Expect = 9.7
Identities = 13/44 (29%), Positives = 20/44 (45%), Gaps = 2/44 (4%)
Frame = -1
Query: 484 RYSC--AQCKKVLPSPHFLDLHIQENHDSYFAVMAEKKPSYCCY 359
+Y C C K+ P F+ HI + H + + KK + C Y
Sbjct: 473 KYRCHVGTCAKLFLGPEFVRKHINKKHKDWLDHI--KKVAICLY 514
>SPBC4C3.06 |||actin cytoskeletal protein Syp1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 818
Score = 25.0 bits (52), Expect = 9.7
Identities = 13/36 (36%), Positives = 21/36 (58%), Gaps = 3/36 (8%)
Frame = -1
Query: 241 MPNAMDVDEAKSNKFHLNNSK---QKTFSKNKYAGK 143
M +A +KS+ FH+NN K +K+ +N+ GK
Sbjct: 239 MSSASANKPSKSSGFHINNGKSKEEKSHGENESGGK 274
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,839,114
Number of Sequences: 5004
Number of extensions: 62853
Number of successful extensions: 210
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 200
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 207
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 299817502
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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