Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_pT_F20
         (700 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF457551-1|AAL68781.1|  406|Anopheles gambiae calreticulin protein.   112   9e-27
AJ459962-1|CAD31061.1|  685|Anopheles gambiae prophenoloxidase 9...    25   1.7  
AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.    25   3.0  

>AF457551-1|AAL68781.1|  406|Anopheles gambiae calreticulin protein.
          Length = 406

 Score =  112 bits (270), Expect = 9e-27
 Identities = 48/76 (63%), Positives = 60/76 (78%)
 Frame = -2

Query: 699 DNPAYKGPWVHPXIDNPEYTPDSNLYKRDEICAVXLDLWQVKSGTIXDDFLITDDPXAAK 520
           DNPAYKG WVHP IDNPEY  D +LY R+E+CAV +D+WQVKSGTI D+F+IT+D   AK
Sbjct: 278 DNPAYKGVWVHPEIDNPEYEEDKSLYLREEVCAVGIDVWQVKSGTIFDNFMITNDLEEAK 337

Query: 519 ERGEVIKKRQEGEKKM 472
           +    +K+ QEGEKK+
Sbjct: 338 KVAASVKETQEGEKKV 353


>AJ459962-1|CAD31061.1|  685|Anopheles gambiae prophenoloxidase 9
           protein.
          Length = 685

 Score = 25.4 bits (53), Expect = 1.7
 Identities = 12/33 (36%), Positives = 19/33 (57%)
 Frame = +3

Query: 21  LSIHVPAHGASPITKH*IITYINSERNPHLXGH 119
           LS++VP +G      H +I +I+   N +L GH
Sbjct: 354 LSVNVPYYGNYHSLGHVLIGFIHDPDNLYLEGH 386


>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
          Length = 1133

 Score = 24.6 bits (51), Expect = 3.0
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = +2

Query: 581 CHKSRXTAQISSRLXRFESGVYSGLSIXG 667
           C K   T +I  +L +FES   S L++ G
Sbjct: 491 CAKQSETTRIEKQLEQFESAPRSKLAVYG 519


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 578,239
Number of Sequences: 2352
Number of extensions: 10075
Number of successful extensions: 65
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 63
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 65
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71086350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)