Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_pT_F15
         (708 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    23   1.8  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    23   1.8  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    23   1.8  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    23   1.8  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          21   9.8  
AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    21   9.8  
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    21   9.8  

>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 9/20 (45%), Positives = 16/20 (80%)
 Frame = +3

Query: 453  HLLTIPKMFLTLMSFTYISL 512
            +LL+IP M+L L+ ++ I+L
Sbjct: 1035 YLLSIPSMYLLLILYSIINL 1054


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 9/20 (45%), Positives = 16/20 (80%)
 Frame = +3

Query: 453  HLLTIPKMFLTLMSFTYISL 512
            +LL+IP M+L L+ ++ I+L
Sbjct: 1035 YLLSIPSMYLLLILYSIINL 1054


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 9/20 (45%), Positives = 16/20 (80%)
 Frame = +3

Query: 453  HLLTIPKMFLTLMSFTYISL 512
            +LL+IP M+L L+ ++ I+L
Sbjct: 1035 YLLSIPSMYLLLILYSIINL 1054


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 9/20 (45%), Positives = 16/20 (80%)
 Frame = +3

Query: 453  HLLTIPKMFLTLMSFTYISL 512
            +LL+IP M+L L+ ++ I+L
Sbjct: 1035 YLLSIPSMYLLLILYSIINL 1054


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +1

Query: 142 DGMSVKITTQISLQPQYILDKI 207
           D +   I T + L PQ+ILD I
Sbjct: 495 DPLITLIETWMPLLPQWILDNI 516


>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = -3

Query: 484 VKNILGIVSKWYYKVSSLT 428
           V NIL  V+ W   V+SLT
Sbjct: 136 VLNILSDVTLWLSNVNSLT 154


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = -3

Query: 484 VKNILGIVSKWYYKVSSLT 428
           V NIL  V+ W   V+SLT
Sbjct: 62  VLNILSDVTLWLSNVNSLT 80


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 147,467
Number of Sequences: 336
Number of extensions: 3023
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18738900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)