Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_pT_F15
         (708 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF067943-9|AAC17667.1|  348|Caenorhabditis elegans Seven tm rece...    29   4.3  
Z81510-4|CAB04164.1|  839|Caenorhabditis elegans Hypothetical pr...    28   7.5  
Z37140-5|CAA85499.1|  312|Caenorhabditis elegans Hypothetical pr...    27   9.9  
Z37140-4|CAA85498.1|  308|Caenorhabditis elegans Hypothetical pr...    27   9.9  
AF040661-17|AAG24227.2|  336|Caenorhabditis elegans Serpentine r...    27   9.9  

>AF067943-9|AAC17667.1|  348|Caenorhabditis elegans Seven tm
           receptor protein 114 protein.
          Length = 348

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = -2

Query: 233 FQYGDLYNIILSNIYCGCKDICVVIF 156
           FQ+ D    IL+  YCGC  +C V+F
Sbjct: 83  FQFSDSTARILTVSYCGCFAMCFVMF 108


>Z81510-4|CAB04164.1|  839|Caenorhabditis elegans Hypothetical
           protein F21D9.5 protein.
          Length = 839

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 11/26 (42%), Positives = 18/26 (69%)
 Frame = +2

Query: 548 KERSVFLKLWLLNSLQCNLDLVKVLS 625
           K+ +VFLKLW++     NL L+++ S
Sbjct: 100 KDINVFLKLWIIGCANINLKLLEINS 125


>Z37140-5|CAA85499.1|  312|Caenorhabditis elegans Hypothetical
           protein ZK899.6 protein.
          Length = 312

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 12/30 (40%), Positives = 15/30 (50%)
 Frame = -2

Query: 368 RATNYIGNWSVFFHPQYFLFGKRSNSYDSI 279
           + TNY   +S F      LFG    SYDS+
Sbjct: 112 QCTNYKSEYSTFIQNSKALFGNMLTSYDSL 141


>Z37140-4|CAA85498.1|  308|Caenorhabditis elegans Hypothetical
           protein ZK899.5 protein.
          Length = 308

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 12/30 (40%), Positives = 15/30 (50%)
 Frame = -2

Query: 368 RATNYIGNWSVFFHPQYFLFGKRSNSYDSI 279
           + TNY   +S F      LFG    SYDS+
Sbjct: 112 QCTNYKSEYSTFIQNSKALFGNMLTSYDSL 141


>AF040661-17|AAG24227.2|  336|Caenorhabditis elegans Serpentine
           receptor, class h protein59 protein.
          Length = 336

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 17/52 (32%), Positives = 30/52 (57%)
 Frame = +3

Query: 390 DVTSKKN*HSFDSVNELTL*YHLLTIPKMFLTLMSFTYISLTKSLSESDNLQ 545
           + T ++N   FDS + L   YH+  I  + L++++F YI L K+LS    ++
Sbjct: 8   NTTCRENYTYFDSSDYLRNAYHVTAIFTVPLSILAF-YIILKKTLSRMKTMK 58


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,773,747
Number of Sequences: 27780
Number of extensions: 265186
Number of successful extensions: 647
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 638
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 647
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1645110168
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)