Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_pT_F14
         (565 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q6C493 Cluster: Similar to wi|NCU07890.1 Neurospora cra...    32   8.1  

>UniRef50_Q6C493 Cluster: Similar to wi|NCU07890.1 Neurospora crassa
           NCU07890.1; n=1; Yarrowia lipolytica|Rep: Similar to
           wi|NCU07890.1 Neurospora crassa NCU07890.1 - Yarrowia
           lipolytica (Candida lipolytica)
          Length = 321

 Score = 32.3 bits (70), Expect = 8.1
 Identities = 16/52 (30%), Positives = 25/52 (48%)
 Frame = -3

Query: 410 WNSAHSGKRWQTFQLHTNLS*LLRYREC*ITRTKHTEPHFDMEQMLLIPWLK 255
           W +  +  R +T   + +   L RYR   I R K T P+FD+  +  + W K
Sbjct: 187 WPNWKTSMREETENCYFSAFHLRRYRNYYIARAKETSPYFDLSCVTSLSWWK 238


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 478,343,340
Number of Sequences: 1657284
Number of extensions: 8497992
Number of successful extensions: 16196
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 15854
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16196
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 37904934977
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)