Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_pT_F13
         (575 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L32977-1|AAC41754.1|  274|Homo sapiens Rieske Fe-S protein protein.   256   5e-68
BC067832-1|AAH67832.1|  274|Homo sapiens ubiquinol-cytochrome c ...   256   5e-68
BC010035-1|AAH10035.1|  274|Homo sapiens ubiquinol-cytochrome c ...   256   5e-68
BC000649-1|AAH00649.1|  274|Homo sapiens ubiquinol-cytochrome c ...   256   5e-68
AC007786-1|AAD38242.1|  274|Homo sapiens UCRI_HUMAN protein.          256   5e-68
Z82206-1|CAI42711.1|  272|Homo sapiens ubiquinol-cytochrome c re...   252   5e-67

>L32977-1|AAC41754.1|  274|Homo sapiens Rieske Fe-S protein protein.
          Length = 274

 Score =  256 bits (626), Expect = 5e-68
 Identities = 115/188 (61%), Positives = 137/188 (72%)
 Frame = -2

Query: 574 DISYPDXSAYRRKETQDPTSKANETIDERQSFTYLIXXXXXXXXXXXXXXXVTHFVSSMS 395
           DI  PD S YRR E  D T  + E+ + R+ F+YL+               VT FVSSMS
Sbjct: 82  DIKVPDFSEYRRLEVLDSTKSSRESSEARKGFSYLVTGVTTVGVAYAAKNAVTQFVSSMS 141

Query: 394 AAADVLALAKIEIKLAEIPEGKSVTFKWRGKPLFIRHRTADEISTEKAVPVDTLRDPQHD 215
           A+ADVLALAKIEIKL++IPEGK++ FKWRGKPLF+RHRT  EI  E AV +  LRDPQHD
Sbjct: 142 ASADVLALAKIEIKLSDIPEGKNMAFKWRGKPLFVRHRTQKEIEQEAAVELSQLRDPQHD 201

Query: 214 DQRTQNPKWLVVIGVCTHLGCVPVANAGEFGGYYCPCHGSHYDASGRIRKGPAPRNXEVP 35
             R + P+W+++IGVCTHLGCVP+ANAG+FGGYYCPCHGSHYDASGRIR GPAP N EVP
Sbjct: 202 LDRVKKPEWVILIGVCTHLGCVPIANAGDFGGYYCPCHGSHYDASGRIRLGPAPLNLEVP 261

Query: 34  PQQRDMDE 11
             +   D+
Sbjct: 262 TYEFTSDD 269


>BC067832-1|AAH67832.1|  274|Homo sapiens ubiquinol-cytochrome c
           reductase, Rieske iron-sulfur polypeptide 1 protein.
          Length = 274

 Score =  256 bits (626), Expect = 5e-68
 Identities = 115/188 (61%), Positives = 137/188 (72%)
 Frame = -2

Query: 574 DISYPDXSAYRRKETQDPTSKANETIDERQSFTYLIXXXXXXXXXXXXXXXVTHFVSSMS 395
           DI  PD S YRR E  D T  + E+ + R+ F+YL+               VT FVSSMS
Sbjct: 82  DIKVPDFSEYRRLEVLDSTKSSRESSEARKGFSYLVTGVTTVGVAYAAKNAVTQFVSSMS 141

Query: 394 AAADVLALAKIEIKLAEIPEGKSVTFKWRGKPLFIRHRTADEISTEKAVPVDTLRDPQHD 215
           A+ADVLALAKIEIKL++IPEGK++ FKWRGKPLF+RHRT  EI  E AV +  LRDPQHD
Sbjct: 142 ASADVLALAKIEIKLSDIPEGKNMAFKWRGKPLFVRHRTQKEIEQEAAVELSQLRDPQHD 201

Query: 214 DQRTQNPKWLVVIGVCTHLGCVPVANAGEFGGYYCPCHGSHYDASGRIRKGPAPRNXEVP 35
             R + P+W+++IGVCTHLGCVP+ANAG+FGGYYCPCHGSHYDASGRIR GPAP N EVP
Sbjct: 202 LDRVKKPEWVILIGVCTHLGCVPIANAGDFGGYYCPCHGSHYDASGRIRLGPAPLNLEVP 261

Query: 34  PQQRDMDE 11
             +   D+
Sbjct: 262 TYEFTSDD 269


>BC010035-1|AAH10035.1|  274|Homo sapiens ubiquinol-cytochrome c
           reductase, Rieske iron-sulfur polypeptide 1 protein.
          Length = 274

 Score =  256 bits (626), Expect = 5e-68
 Identities = 115/188 (61%), Positives = 137/188 (72%)
 Frame = -2

Query: 574 DISYPDXSAYRRKETQDPTSKANETIDERQSFTYLIXXXXXXXXXXXXXXXVTHFVSSMS 395
           DI  PD S YRR E  D T  + E+ + R+ F+YL+               VT FVSSMS
Sbjct: 82  DIKVPDFSEYRRLEVLDSTKSSRESSEARKGFSYLVTGVTTVGVAYAAKNAVTQFVSSMS 141

Query: 394 AAADVLALAKIEIKLAEIPEGKSVTFKWRGKPLFIRHRTADEISTEKAVPVDTLRDPQHD 215
           A+ADVLALAKIEIKL++IPEGK++ FKWRGKPLF+RHRT  EI  E AV +  LRDPQHD
Sbjct: 142 ASADVLALAKIEIKLSDIPEGKNMAFKWRGKPLFVRHRTQKEIEQEAAVELSQLRDPQHD 201

Query: 214 DQRTQNPKWLVVIGVCTHLGCVPVANAGEFGGYYCPCHGSHYDASGRIRKGPAPRNXEVP 35
             R + P+W+++IGVCTHLGCVP+ANAG+FGGYYCPCHGSHYDASGRIR GPAP N EVP
Sbjct: 202 LDRVKKPEWVILIGVCTHLGCVPIANAGDFGGYYCPCHGSHYDASGRIRLGPAPLNLEVP 261

Query: 34  PQQRDMDE 11
             +   D+
Sbjct: 262 TYEFTSDD 269


>BC000649-1|AAH00649.1|  274|Homo sapiens ubiquinol-cytochrome c
           reductase, Rieske iron-sulfur polypeptide 1 protein.
          Length = 274

 Score =  256 bits (626), Expect = 5e-68
 Identities = 115/188 (61%), Positives = 137/188 (72%)
 Frame = -2

Query: 574 DISYPDXSAYRRKETQDPTSKANETIDERQSFTYLIXXXXXXXXXXXXXXXVTHFVSSMS 395
           DI  PD S YRR E  D T  + E+ + R+ F+YL+               VT FVSSMS
Sbjct: 82  DIKVPDFSEYRRLEVLDSTKSSRESSEARKGFSYLVTGVTTVGVAYAAKNAVTQFVSSMS 141

Query: 394 AAADVLALAKIEIKLAEIPEGKSVTFKWRGKPLFIRHRTADEISTEKAVPVDTLRDPQHD 215
           A+ADVLALAKIEIKL++IPEGK++ FKWRGKPLF+RHRT  EI  E AV +  LRDPQHD
Sbjct: 142 ASADVLALAKIEIKLSDIPEGKNMAFKWRGKPLFVRHRTQKEIEQEAAVELSQLRDPQHD 201

Query: 214 DQRTQNPKWLVVIGVCTHLGCVPVANAGEFGGYYCPCHGSHYDASGRIRKGPAPRNXEVP 35
             R + P+W+++IGVCTHLGCVP+ANAG+FGGYYCPCHGSHYDASGRIR GPAP N EVP
Sbjct: 202 LDRVKKPEWVILIGVCTHLGCVPIANAGDFGGYYCPCHGSHYDASGRIRLGPAPLNLEVP 261

Query: 34  PQQRDMDE 11
             +   D+
Sbjct: 262 TYEFTSDD 269


>AC007786-1|AAD38242.1|  274|Homo sapiens UCRI_HUMAN protein.
          Length = 274

 Score =  256 bits (626), Expect = 5e-68
 Identities = 115/188 (61%), Positives = 137/188 (72%)
 Frame = -2

Query: 574 DISYPDXSAYRRKETQDPTSKANETIDERQSFTYLIXXXXXXXXXXXXXXXVTHFVSSMS 395
           DI  PD S YRR E  D T  + E+ + R+ F+YL+               VT FVSSMS
Sbjct: 82  DIKVPDFSEYRRLEVLDSTKSSRESSEARKGFSYLVTGVTTVGVAYAAKNAVTQFVSSMS 141

Query: 394 AAADVLALAKIEIKLAEIPEGKSVTFKWRGKPLFIRHRTADEISTEKAVPVDTLRDPQHD 215
           A+ADVLALAKIEIKL++IPEGK++ FKWRGKPLF+RHRT  EI  E AV +  LRDPQHD
Sbjct: 142 ASADVLALAKIEIKLSDIPEGKNMAFKWRGKPLFVRHRTQKEIEQEAAVELSQLRDPQHD 201

Query: 214 DQRTQNPKWLVVIGVCTHLGCVPVANAGEFGGYYCPCHGSHYDASGRIRKGPAPRNXEVP 35
             R + P+W+++IGVCTHLGCVP+ANAG+FGGYYCPCHGSHYDASGRIR GPAP N EVP
Sbjct: 202 LDRVKKPEWVILIGVCTHLGCVPIANAGDFGGYYCPCHGSHYDASGRIRLGPAPLNLEVP 261

Query: 34  PQQRDMDE 11
             +   D+
Sbjct: 262 TYEFTSDD 269


>Z82206-1|CAI42711.1|  272|Homo sapiens ubiquinol-cytochrome c
           reductase, Rieske iron-sulfur polypeptide-like 1
           protein.
          Length = 272

 Score =  252 bits (618), Expect = 5e-67
 Identities = 113/188 (60%), Positives = 136/188 (72%)
 Frame = -2

Query: 574 DISYPDXSAYRRKETQDPTSKANETIDERQSFTYLIXXXXXXXXXXXXXXXVTHFVSSMS 395
           D+  PD S YRR E  D T  + E+ + R+ F+YL+               VT FVSSMS
Sbjct: 80  DVKVPDFSEYRRLEVLDSTKSSRESTEARKGFSYLVTGVTTVGVAYAAKNAVTQFVSSMS 139

Query: 394 AAADVLALAKIEIKLAEIPEGKSVTFKWRGKPLFIRHRTADEISTEKAVPVDTLRDPQHD 215
           A+ADVLALAKIEIKL++IPEGK++ FKWRGKPLF+RHRT  EI  E AV +  LRDPQHD
Sbjct: 140 ASADVLALAKIEIKLSDIPEGKNMAFKWRGKPLFVRHRTQKEIKQEAAVELSQLRDPQHD 199

Query: 214 DQRTQNPKWLVVIGVCTHLGCVPVANAGEFGGYYCPCHGSHYDASGRIRKGPAPRNXEVP 35
             R + P+W+++IGVCTHLGCVP+ANAG+FGGYYCPCHGSHYDASGRIR GPA  N EVP
Sbjct: 200 LDRVKKPEWVILIGVCTHLGCVPIANAGDFGGYYCPCHGSHYDASGRIRLGPATLNLEVP 259

Query: 34  PQQRDMDE 11
             +   D+
Sbjct: 260 TYEFTSDD 267


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 78,690,940
Number of Sequences: 237096
Number of extensions: 1689994
Number of successful extensions: 7705
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7575
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7705
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5929224630
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)