BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P17_pT_F13
(575 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE014134-274|AAF51354.3| 230|Drosophila melanogaster CG7361-PB,... 262 3e-70
AE014134-273|AAF51353.1| 260|Drosophila melanogaster CG7361-PA,... 142 3e-34
BT010222-1|AAQ23540.1| 260|Drosophila melanogaster RH01528p pro... 140 2e-33
AY052116-1|AAK93540.1| 593|Drosophila melanogaster SD06560p pro... 29 6.0
AL031765-10|CAA21128.1| 665|Drosophila melanogaster EG:22E5.5 p... 29 6.0
AE014298-325|AAF45715.1| 552|Drosophila melanogaster CG4199-PA,... 29 6.0
AE014298-324|AAF45716.2| 593|Drosophila melanogaster CG4199-PD,... 29 6.0
AE014298-323|AAF45717.2| 593|Drosophila melanogaster CG4199-PC,... 29 6.0
AE014298-322|AAF45714.2| 593|Drosophila melanogaster CG4199-PB,... 29 6.0
AE014298-321|AAN09070.2| 665|Drosophila melanogaster CG4199-PF,... 29 6.0
AE014298-320|AAN09069.1| 647|Drosophila melanogaster CG4199-PE,... 29 6.0
BT010230-1|AAQ23548.1| 1186|Drosophila melanogaster RE61780p pro... 28 7.9
AE014297-1377|AAF54698.1| 1354|Drosophila melanogaster CG17360-P... 28 7.9
>AE014134-274|AAF51354.3| 230|Drosophila melanogaster CG7361-PB,
isoform B protein.
Length = 230
Score = 262 bits (641), Expect = 3e-70
Identities = 122/190 (64%), Positives = 147/190 (77%)
Frame = -2
Query: 574 DISYPDXSAYRRKETQDPTSKANETIDERQSFTYLIXXXXXXXXXXXXXXXVTHFVSSMS 395
D+ PD SAYRR+ +D + + N+T +ER++F+YL+ V F+ SMS
Sbjct: 39 DLQVPDFSAYRRESVKD-SRRRNDTAEERKAFSYLMVGAGAVGGAYAAKGLVNTFIGSMS 97
Query: 394 AAADVLALAKIEIKLAEIPEGKSVTFKWRGKPLFIRHRTADEISTEKAVPVDTLRDPQHD 215
A+A+VLA+AKIEIKL++IPEGKSVTFKWRGKPLFIRHRTA EI TE+ VP TLRDP+ D
Sbjct: 98 ASAEVLAMAKIEIKLSDIPEGKSVTFKWRGKPLFIRHRTAAEIETERNVPTSTLRDPEAD 157
Query: 214 DQRTQNPKWLVVIGVCTHLGCVPVANAGEFGGYYCPCHGSHYDASGRIRKGPAPRNXEVP 35
DQR P+WLVVIGVCTHLGCVP+ANAG++GGYYCPCHGSHYDASGRIRKGPAP N EVP
Sbjct: 158 DQRVIKPEWLVVIGVCTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPLNLEVP 217
Query: 34 PQQRDMDEGL 5
+ +EGL
Sbjct: 218 THEFP-NEGL 226
>AE014134-273|AAF51353.1| 260|Drosophila melanogaster CG7361-PA,
isoform A protein.
Length = 260
Score = 142 bits (344), Expect = 3e-34
Identities = 70/124 (56%), Positives = 89/124 (71%)
Frame = -2
Query: 574 DISYPDXSAYRRKETQDPTSKANETIDERQSFTYLIXXXXXXXXXXXXXXXVTHFVSSMS 395
D+ PD SAYRR+ +D + + N+T +ER++F+YL+ V F+ SMS
Sbjct: 39 DLQVPDFSAYRRESVKD-SRRRNDTAEERKAFSYLMVGAGAVGGAYAAKGLVNTFIGSMS 97
Query: 394 AAADVLALAKIEIKLAEIPEGKSVTFKWRGKPLFIRHRTADEISTEKAVPVDTLRDPQHD 215
A+A+VLA+AKIEIKL++IPEGKSVTFKWRGKPLFIRHRTA EI TE+ VP TLRDP+ D
Sbjct: 98 ASAEVLAMAKIEIKLSDIPEGKSVTFKWRGKPLFIRHRTAAEIETERNVPTSTLRDPEAD 157
Query: 214 DQRT 203
D T
Sbjct: 158 DVGT 161
>BT010222-1|AAQ23540.1| 260|Drosophila melanogaster RH01528p
protein.
Length = 260
Score = 140 bits (338), Expect = 2e-33
Identities = 69/124 (55%), Positives = 88/124 (70%)
Frame = -2
Query: 574 DISYPDXSAYRRKETQDPTSKANETIDERQSFTYLIXXXXXXXXXXXXXXXVTHFVSSMS 395
D+ PD SAYRR+ +D + + N+T +ER++F+YL+ V F+ SMS
Sbjct: 39 DLQVPDFSAYRRESVKD-SRRRNDTAEERKAFSYLMVGAGAVGGAYAAKGLVNTFIGSMS 97
Query: 394 AAADVLALAKIEIKLAEIPEGKSVTFKWRGKPLFIRHRTADEISTEKAVPVDTLRDPQHD 215
A+A+VLA+AKIEIKL++IPEGKSVTFKWRGKPLFIRH TA EI TE+ VP TLRDP+ D
Sbjct: 98 ASAEVLAMAKIEIKLSDIPEGKSVTFKWRGKPLFIRHSTAAEIETERNVPTSTLRDPEAD 157
Query: 214 DQRT 203
D T
Sbjct: 158 DVGT 161
>AY052116-1|AAK93540.1| 593|Drosophila melanogaster SD06560p
protein.
Length = 593
Score = 28.7 bits (61), Expect = 6.0
Identities = 14/39 (35%), Positives = 18/39 (46%)
Frame = -2
Query: 202 QNPKWLVVIGVCTHLGCVPVANAGEFGGYYCPCHGSHYD 86
QN + L V CTH G A G CP HG+ ++
Sbjct: 87 QNDRLLAVGAKCTHYGAPLQTGALGLGRVRCPWHGACFN 125
>AL031765-10|CAA21128.1| 665|Drosophila melanogaster EG:22E5.5
protein.
Length = 665
Score = 28.7 bits (61), Expect = 6.0
Identities = 14/39 (35%), Positives = 18/39 (46%)
Frame = -2
Query: 202 QNPKWLVVIGVCTHLGCVPVANAGEFGGYYCPCHGSHYD 86
QN + L V CTH G A G CP HG+ ++
Sbjct: 159 QNDRLLAVGAKCTHYGAPLQTGALGLGRVRCPWHGACFN 197
>AE014298-325|AAF45715.1| 552|Drosophila melanogaster CG4199-PA,
isoform A protein.
Length = 552
Score = 28.7 bits (61), Expect = 6.0
Identities = 14/39 (35%), Positives = 18/39 (46%)
Frame = -2
Query: 202 QNPKWLVVIGVCTHLGCVPVANAGEFGGYYCPCHGSHYD 86
QN + L V CTH G A G CP HG+ ++
Sbjct: 46 QNDRLLAVGAKCTHYGAPLQTGALGLGRVRCPWHGACFN 84
>AE014298-324|AAF45716.2| 593|Drosophila melanogaster CG4199-PD,
isoform D protein.
Length = 593
Score = 28.7 bits (61), Expect = 6.0
Identities = 14/39 (35%), Positives = 18/39 (46%)
Frame = -2
Query: 202 QNPKWLVVIGVCTHLGCVPVANAGEFGGYYCPCHGSHYD 86
QN + L V CTH G A G CP HG+ ++
Sbjct: 87 QNDRLLAVGAKCTHYGAPLQTGALGLGRVRCPWHGACFN 125
>AE014298-323|AAF45717.2| 593|Drosophila melanogaster CG4199-PC,
isoform C protein.
Length = 593
Score = 28.7 bits (61), Expect = 6.0
Identities = 14/39 (35%), Positives = 18/39 (46%)
Frame = -2
Query: 202 QNPKWLVVIGVCTHLGCVPVANAGEFGGYYCPCHGSHYD 86
QN + L V CTH G A G CP HG+ ++
Sbjct: 87 QNDRLLAVGAKCTHYGAPLQTGALGLGRVRCPWHGACFN 125
>AE014298-322|AAF45714.2| 593|Drosophila melanogaster CG4199-PB,
isoform B protein.
Length = 593
Score = 28.7 bits (61), Expect = 6.0
Identities = 14/39 (35%), Positives = 18/39 (46%)
Frame = -2
Query: 202 QNPKWLVVIGVCTHLGCVPVANAGEFGGYYCPCHGSHYD 86
QN + L V CTH G A G CP HG+ ++
Sbjct: 87 QNDRLLAVGAKCTHYGAPLQTGALGLGRVRCPWHGACFN 125
>AE014298-321|AAN09070.2| 665|Drosophila melanogaster CG4199-PF,
isoform F protein.
Length = 665
Score = 28.7 bits (61), Expect = 6.0
Identities = 14/39 (35%), Positives = 18/39 (46%)
Frame = -2
Query: 202 QNPKWLVVIGVCTHLGCVPVANAGEFGGYYCPCHGSHYD 86
QN + L V CTH G A G CP HG+ ++
Sbjct: 159 QNDRLLAVGAKCTHYGAPLQTGALGLGRVRCPWHGACFN 197
>AE014298-320|AAN09069.1| 647|Drosophila melanogaster CG4199-PE,
isoform E protein.
Length = 647
Score = 28.7 bits (61), Expect = 6.0
Identities = 14/39 (35%), Positives = 18/39 (46%)
Frame = -2
Query: 202 QNPKWLVVIGVCTHLGCVPVANAGEFGGYYCPCHGSHYD 86
QN + L V CTH G A G CP HG+ ++
Sbjct: 141 QNDRLLAVGAKCTHYGAPLQTGALGLGRVRCPWHGACFN 179
>BT010230-1|AAQ23548.1| 1186|Drosophila melanogaster RE61780p
protein.
Length = 1186
Score = 28.3 bits (60), Expect = 7.9
Identities = 12/24 (50%), Positives = 13/24 (54%)
Frame = -2
Query: 100 GSHYDASGRIRKGPAPRNXEVPPQ 29
G HYD SG GPA + E PQ
Sbjct: 222 GLHYDTSGVFEYGPATQKQEEQPQ 245
>AE014297-1377|AAF54698.1| 1354|Drosophila melanogaster CG17360-PA
protein.
Length = 1354
Score = 28.3 bits (60), Expect = 7.9
Identities = 12/24 (50%), Positives = 13/24 (54%)
Frame = -2
Query: 100 GSHYDASGRIRKGPAPRNXEVPPQ 29
G HYD SG GPA + E PQ
Sbjct: 222 GLHYDTSGVFEYGPATQKQEEQPQ 245
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,944,698
Number of Sequences: 53049
Number of extensions: 487014
Number of successful extensions: 1538
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1434
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1532
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2276053890
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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