Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P17_pT_F10
(847 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_0411 + 29151647-29151790,29152974-29153039,29153398-291535... 210 1e-54
04_04_1432 - 33558895-33559023,33559215-33559286,33559405-335594... 174 6e-44
05_06_0265 - 26759960-26760088,26760315-26760386,26760457-267605... 151 5e-37
04_04_1431 - 33551127-33551300,33551362-33551433,33551508-335515... 116 2e-26
01_06_0363 - 28745581-28745709,28746043-28746114,28746373-287464... 112 4e-25
07_03_1039 - 23454130-23454552,23454859-23455536 35 0.071
05_07_0261 + 28764571-28764733,28766039-28766153,28766241-287663... 31 1.2
09_04_0692 + 19502878-19502920,19505011-19505104,19505196-195052... 30 2.0
08_02_0370 - 16333471-16333526,16333821-16333912,16334553-163346... 29 6.2
12_01_0979 - 9914779-9915327,9915409-9915536,9915947-9916050,991... 28 8.1
>01_06_0411 +
29151647-29151790,29152974-29153039,29153398-29153538,
29153638-29153724,29153968-29154084,29154177-29154265,
29154510-29154561,29154667-29154762,29154835-29154879,
29155002-29155091,29155164-29155235,29155490-29155618
Length = 375
Score = 210 bits (513), Expect = 1e-54
Identities = 103/267 (38%), Positives = 161/267 (60%), Gaps = 2/267 (0%)
Frame = -1
Query: 847 LGWCVEMFQAYCIVXDDIMDGSSVRRGMPCWYRRPEVGITCAFNDSLLIHSSLFEFLKTN 668
LGWC+E QAY +V DDIMD S RRG PCW+R P+VG+ A ND +++ + + L+ +
Sbjct: 111 LGWCIEWLQAYFLVLDDIMDNSQTRRGQPCWFRVPQVGLI-AVNDGIILRNHISRILQRH 169
Query: 667 FRTNPNYMKMFELFNETLWRTSMGQHLDHVTGNR-KTDYSSFTLDRXXXXXXXXXXXXXY 491
F+ Y+ + +LFNE ++T+ GQ LD +T + + D + + L +
Sbjct: 170 FKGKLYYVDLIDLFNEVEFKTASGQLLDLITTHEGEKDLTKYNLTVHRRIVQYKTAYYSF 229
Query: 490 NLPVSLGLLLA-ENVDEKIYKSAQDICLEIGTMFQIQDDFIDCFGDEIKTGKVGTDIQER 314
LPV+ LLL+ EN+D + ++I +E+GT FQ+QDD++DC+GD GK+GTDI++
Sbjct: 230 YLPVACALLLSGENLDN--FGDVKNILVEMGTYFQVQDDYLDCYGDPEFIGKIGTDIEDY 287
Query: 313 KCTWLAVQALQRCTEAQRTVFKACYGSSEPAHVERIKRLYEDLHLPQIYKHQEKAMYDNI 134
KC+WL VQAL+R E Q+ + YG +P V ++K LY++L+L ++ E+ Y+ +
Sbjct: 288 KCSWLVVQALERADENQKHILFENYGKPDPECVAKVKDLYKELNLEAVFHEYERESYNKL 347
Query: 133 IRQIENIPIEAARVLFKKLLDITYNRQ 53
I IE P +A + + K L Y RQ
Sbjct: 348 IADIEAHPNKAVQNVLKSFLHKIYKRQ 374
>04_04_1432 -
33558895-33559023,33559215-33559286,33559405-33559494,
33559574-33559618,33559693-33559788,33559905-33559956,
33560044-33560132,33560226-33560342,33560448-33560534,
33560646-33560761,33560854-33560878,33561816-33562121
Length = 407
Score = 174 bits (424), Expect = 6e-44
Identities = 93/266 (34%), Positives = 142/266 (53%), Gaps = 1/266 (0%)
Frame = -1
Query: 847 LGWCVEMFQAYCIVXDDIMDGSSVRRGMPCWYRRPEVGITCAFNDSLLIHSSLFEFLKTN 668
LGWCVE QA +V DDI D + RR CWY+ P VG++ A ND +L+ + +K
Sbjct: 143 LGWCVEWLQASALVLDDITDNAYTRRDNLCWYKLPTVGMS-AINDGVLLKCHVQAIIKRY 201
Query: 667 FRTNPNYMKMFELFNETLWRTSMGQHLDHVTGNRKT-DYSSFTLDRXXXXXXXXXXXXXY 491
F+ ++ + EL+NE +T+MGQ LD +T + D + + + +
Sbjct: 202 FKEKFYFLDLMELWNEIGLQTAMGQMLDLITTHTGAKDLARYRIQGYRRIVKYKTSYYSF 261
Query: 490 NLPVSLGLLLAENVDEKIYKSAQDICLEIGTMFQIQDDFIDCFGDEIKTGKVGTDIQERK 311
LPV+ LLL Y +++ +E+G FQIQDD++DCFGD GKVGTDI++ K
Sbjct: 262 YLPVACALLL-NGARLSDYVELKNVLIEMGVYFQIQDDYLDCFGDPEVIGKVGTDIEDYK 320
Query: 310 CTWLAVQALQRCTEAQRTVFKACYGSSEPAHVERIKRLYEDLHLPQIYKHQEKAMYDNII 131
C+WL VQA++ E + + YG S+P V +K +Y +L L I+ E +Y +++
Sbjct: 321 CSWLIVQAMELANENEMKILYENYGKSDPKCVAEVKSVYRELDLQDIFLEYESRVYKHLV 380
Query: 130 RQIENIPIEAARVLFKKLLDITYNRQ 53
I+ A R + K L Y R+
Sbjct: 381 STIDAETDRAIRDILKSFLKKIYRRK 406
>05_06_0265 -
26759960-26760088,26760315-26760386,26760457-26760546,
26760649-26760693,26760785-26760880,26760980-26761031,
26761209-26761297,26761388-26761504,26761680-26761737,
26761834-26761936,26762027-26762051,26762677-26762826
Length = 341
Score = 151 bits (367), Expect = 5e-37
Identities = 78/225 (34%), Positives = 126/225 (56%), Gaps = 1/225 (0%)
Frame = -1
Query: 724 AFNDSLLIHSSLFEFLKTNFRTNPNYMKMFELFNETLWRTSMGQHLDHVTGNR-KTDYSS 548
A ND +++ + + L+ +FR Y + +LFNE ++T+ GQ LD +T + + D +
Sbjct: 117 AINDGIILRNHITRMLRLHFRGKLYYADLLDLFNEVEFKTASGQLLDLITTHEGEKDLNK 176
Query: 547 FTLDRXXXXXXXXXXXXXYNLPVSLGLLLAENVDEKIYKSAQDICLEIGTMFQIQDDFID 368
+ + + LPV+ LLL+ D Y + +DI +++G FQ+QDD++D
Sbjct: 177 YNIGVHRRIVQYKTSYYSFYLPVACALLLSGE-DLTKYGAVEDILVKMGIYFQVQDDYLD 235
Query: 367 CFGDEIKTGKVGTDIQERKCTWLAVQALQRCTEAQRTVFKACYGSSEPAHVERIKRLYED 188
C+GD GK+GTDI++ KC+WL VQAL+R E+Q++V YG +PA V ++K LY +
Sbjct: 236 CYGDPKFIGKIGTDIEDYKCSWLVVQALERADESQKSVLFENYGKKDPACVAKVKSLYRE 295
Query: 187 LHLPQIYKHQEKAMYDNIIRQIENIPIEAARVLFKKLLDITYNRQ 53
L+L ++ E Y +I IE P A + + K L Y RQ
Sbjct: 296 LNLEAVFLDYENESYKKLIADIEAQPSIAVQNVLKSFLHKIYKRQ 340
>04_04_1431 -
33551127-33551300,33551362-33551433,33551508-33551597,
33551671-33551715,33551785-33551880,33552245-33552296,
33552412-33552500,33552590-33552887,33553007-33553109,
33553328-33553352,33553503-33553763
Length = 434
Score = 116 bits (280), Expect = 2e-26
Identities = 75/246 (30%), Positives = 121/246 (49%), Gaps = 16/246 (6%)
Frame = -1
Query: 742 EVGITCAFNDSLLIHSSLFEFLKTNFRTNPNYMKMFELFNETLWRTSMGQHLDHV-TGNR 566
+VG+ ND +++ + +K FR P ++ + E+++E +TS+GQ LD + T
Sbjct: 190 QVGLR-GINDGIILKCHILIMIKKYFREKPYFLDILEIWSEIALQTSLGQMLDLISTHTG 248
Query: 565 KTDYSSFTLDRXXXXXXXXXXXXXYNLPVSLGLLLAENVDEKIYKSAQDICLEIGTMFQI 386
D + ++++ + LPV+ LLL+ E + +DI +E+G FQI
Sbjct: 249 ADDLAKYSIEGYRRIVKYKTAYYSFYLPVANALLLSGAKLED-FSGLKDILIEMGIYFQI 307
Query: 385 QDDFIDCFGDEIKTGKVGTDIQERKCTWLAVQALQRCTEAQRTVFKACYGSSEPAHVERI 206
QDD++DCF D GK+GTDI++ KC+WL VQAL Q V YG + + V +
Sbjct: 308 QDDYLDCFADPNTIGKIGTDIEDHKCSWLIVQALGHADNNQIEVLHRNYGKKDSSSVSEV 367
Query: 205 KRLYEDLHL--------------PQ-IYKHQEKAMYDNIIRQIENIPIEAARVLFKKLLD 71
KR Y L L PQ I+ E+ Y++++ IE AAR + L
Sbjct: 368 KRTYAALDLKIWAIDLADCEFCPPQDIFSEFERRCYNHLVTSIEAQKDHAAREILISFLK 427
Query: 70 ITYNRQ 53
+ R+
Sbjct: 428 KIHQRK 433
>01_06_0363 -
28745581-28745709,28746043-28746114,28746373-28746417,
28746523-28746618,28747029-28747080,28747232-28747305,
28747386-28747502,28747844-28747930,28748186-28748281,
28748508-28748654
Length = 304
Score = 112 bits (269), Expect = 4e-25
Identities = 65/170 (38%), Positives = 92/170 (54%), Gaps = 1/170 (0%)
Frame = -1
Query: 844 GWCVEMFQAYCIVXDDIMDGSSVRRGMPCWYRRPEVGITCAFNDSLLIHSSLFEFLKTNF 665
GW QAY +V DDIMD S RRG PCW+R P+VG+ A ND L++ S + + F
Sbjct: 79 GW---QLQAYFLVLDDIMDNSQTRRGKPCWFRLPKVGL-IAINDGLVLRSQISRIFRRYF 134
Query: 664 RTNPNYMKMFELFNETLWRTSMGQHLDHVTGNRKTDYSSFTLDRXXXXXXXXXXXXXYNL 485
R Y+ + +LFNE +T+ GQ LD +T T+ L++ + L
Sbjct: 135 RGKSYYVDLLDLFNEVEIQTTSGQLLDQIT----TNEGRKDLNKYRRIVEYKTAYYSFYL 190
Query: 484 PVSLGLLL-AENVDEKIYKSAQDICLEIGTMFQIQDDFIDCFGDEIKTGK 338
PV+ LLL E++D Y + I +E+G FQ QDD++DCFG+ GK
Sbjct: 191 PVACALLLFDESLDN--YAQVKHILVEMGVYFQSQDDYLDCFGEPEIIGK 238
Score = 57.2 bits (132), Expect = 2e-08
Identities = 27/74 (36%), Positives = 39/74 (52%)
Frame = -1
Query: 277 CTEAQRTVFKACYGSSEPAHVERIKRLYEDLHLPQIYKHQEKAMYDNIIRQIENIPIEAA 98
C + K YG S+PA V ++K LY +LHL +++ E+ Y+ +I IE P EA
Sbjct: 229 CFGEPEIIGKENYGKSDPACVAKVKDLYNELHLQRVFSEYERESYEKLISAIEAQPNEAV 288
Query: 97 RVLFKKLLDITYNR 56
R + K L Y R
Sbjct: 289 RAVLKSFLHKIYKR 302
>07_03_1039 - 23454130-23454552,23454859-23455536
Length = 366
Score = 35.1 bits (77), Expect = 0.071
Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Frame = -1
Query: 481 VSLGLLLAENVDEKIYKSAQDICLEIGTMFQIQDDFIDCFGDEIKTGK-VGTDIQERKCT 305
V +G +L DE+I +S + IG +FQ+ DD +D + GK G D+ K T
Sbjct: 260 VVIGAILGGGSDEQI-ESLRMYARSIGLLFQVVDDILDVTKSSEELGKTAGKDLASDKTT 318
Query: 304 WLAVQALQRCTE 269
+ + L++ E
Sbjct: 319 YPKLLGLEKSRE 330
>05_07_0261 +
28764571-28764733,28766039-28766153,28766241-28766344,
28766571-28766698,28766765-28767328
Length = 357
Score = 31.1 bits (67), Expect = 1.2
Identities = 38/188 (20%), Positives = 70/188 (37%), Gaps = 3/188 (1%)
Frame = -1
Query: 835 VEMFQAYCIVXDDIMDGSSVRRGMPCWYRRPEVGITCAFNDSLLIHSSLFEFLKTNFRTN 656
+EM ++ DD++D S +RRG ++ + D + SS F N
Sbjct: 106 IEMIHTASLIHDDVIDDSGMRRGKETIHQLYGTRVAVLAGDFMFAQSSW-------FLAN 158
Query: 655 PNYMKMFELFNETLWRTSMGQHLDHVTGNRKTDYSSFTLDRXXXXXXXXXXXXXYNLPVS 476
+++ +L ++ + + D +G K + F D +L S
Sbjct: 159 LENIEVIKLISQMMCSQVI---KDFASGEIKQASTLFDCDVTLDDYLLKSYYKTASLLAS 215
Query: 475 --LGLLLAENVDEKIYKSAQDICLEIGTMFQIQDDFIDCFGDEIKTGK-VGTDIQERKCT 305
+ V I + + +G FQ+ DD +D + GK G+D+ + T
Sbjct: 216 STRSAAIFSGVSTTICEQMYEYGRNLGLSFQVVDDILDFTQSAEQLGKPAGSDLAKGNLT 275
Query: 304 WLAVQALQ 281
+ ALQ
Sbjct: 276 APVIFALQ 283
>09_04_0692 +
19502878-19502920,19505011-19505104,19505196-19505227,
19505833-19506074,19506758-19506994,19508283-19508396
Length = 253
Score = 30.3 bits (65), Expect = 2.0
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = +2
Query: 83 FKENAGGLYWYIFNLSYNIVVH 148
F++ GG+YWY F YN+V+H
Sbjct: 231 FRDFTGGMYWYAF--IYNVVLH 250
>08_02_0370 -
16333471-16333526,16333821-16333912,16334553-16334671,
16335152-16335226,16335328-16335393,16335507-16335563,
16335640-16335689,16335774-16335944,16337057-16337183,
16337658-16338017
Length = 390
Score = 28.7 bits (61), Expect = 6.2
Identities = 16/70 (22%), Positives = 35/70 (50%)
Frame = -1
Query: 475 LGLLLAENVDEKIYKSAQDICLEIGTMFQIQDDFIDCFGDEIKTGKVGTDIQERKCTWLA 296
L +++ E + + +++ + T++Q+ + ID G E+K ++ IQE C L
Sbjct: 215 LPIIVLEMPSVLLMAAIRNVHIARPTIYQVVKEMIDKMGYEVKLVRINKRIQEAYCAELF 274
Query: 295 VQALQRCTEA 266
+ + TE+
Sbjct: 275 LTKVGDHTES 284
>12_01_0979 -
9914779-9915327,9915409-9915536,9915947-9916050,
9919832-9919946,9921036-9921528
Length = 462
Score = 28.3 bits (60), Expect = 8.1
Identities = 13/50 (26%), Positives = 23/50 (46%)
Frame = -1
Query: 835 VEMFQAYCIVXDDIMDGSSVRRGMPCWYRRPEVGITCAFNDSLLIHSSLF 686
+EM ++ DD++D S +RRG ++ + D + SS F
Sbjct: 216 IEMIHTASLIHDDVIDDSGMRRGKETIHQLYGTRVAVLAGDFMFAQSSWF 265
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,327,446
Number of Sequences: 37544
Number of extensions: 446033
Number of successful extensions: 944
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 912
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 935
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2350456800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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