Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_pT_F08
         (622 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              26   0.26 
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    22   5.5  
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          21   9.7  
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          21   9.7  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      21   9.7  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    21   9.7  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    21   9.7  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    21   9.7  

>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 26.2 bits (55), Expect = 0.26
 Identities = 15/49 (30%), Positives = 26/49 (53%)
 Frame = -3

Query: 281  QITERILWIEELQVKIQGVHMCVVQSIFEHSTIYNLMKLTXHGGMNSRQ 135
            Q+ E  L+I+E+     G + C V++ F H T+ +  +L  H   +S Q
Sbjct: 1325 QLPEGSLFIKEVDRTDAGEYSCYVENTFGHDTVTH--QLIVHAPPHSPQ 1371


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 7/22 (31%), Positives = 14/22 (63%)
 Frame = +3

Query: 552 QNVYQCLYLRQCRMRRTLFKSH 617
           +  YQCL  ++   ++ L++SH
Sbjct: 59  EKTYQCLLCQKAFDQKNLYQSH 80


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 10/32 (31%), Positives = 16/32 (50%)
 Frame = -1

Query: 391 FKANSENVSVLEQSQTYSTSTPDLLFHHFYNE 296
           F   ++N  +    Q+YSTS  D  F+  Y +
Sbjct: 395 FDFQNKNNLIPSALQSYSTSMRDPAFYMLYQK 426


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 8/20 (40%), Positives = 9/20 (45%)
 Frame = -2

Query: 369 YQYWNNRKHTAPQHLTCYFT 310
           Y  W   KH  P+    YFT
Sbjct: 204 YTGWYLTKHNVPEQRLNYFT 223


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 8/20 (40%), Positives = 9/20 (45%)
 Frame = -2

Query: 369 YQYWNNRKHTAPQHLTCYFT 310
           Y  W   KH  P+    YFT
Sbjct: 204 YTGWYLTKHNVPEQRLNYFT 223


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +1

Query: 328 VLRCCMFAIVPILIHFPSWL 387
           VLRC + + V  L+   SWL
Sbjct: 149 VLRCVVPSFVKDLVRVVSWL 168


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 11/49 (22%), Positives = 18/49 (36%)
 Frame = +3

Query: 93  LHLLIPPTVHPSCRLSTIHSPMXCKFH*VIYGTVFKNALDDTHMNTLNL 239
           LHL  PP   PS +      P         + T+ ++ ++   M    L
Sbjct: 673 LHLTSPPARSPSSQAQASQCPQTASLLSSTHSTLARSLMEGPRMTAEQL 721


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +1

Query: 328 VLRCCMFAIVPILIHFPSWL 387
           VLRC + + V  L+   SWL
Sbjct: 149 VLRCVVPSFVKDLVRVVSWL 168


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 167,785
Number of Sequences: 438
Number of extensions: 3499
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18460203
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)