Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_pT_F03
         (765 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    24   1.2  
AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein p...    23   2.0  
AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein p...    23   2.0  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          23   3.5  
AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory recept...    23   3.5  
AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    22   6.2  
AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory recept...    21   8.2  
AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory recept...    21   8.2  

>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = +1

Query: 112 YNYNCNLCGQQHSLYGVYSGLITL 183
           +N  CNLC   +S+YG  + L  L
Sbjct: 218 HNELCNLCQVANSIYGFQNFLFVL 241


>AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein
           protein.
          Length = 287

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = -2

Query: 320 QMVEVEQ*HQPLLPENHSHIPPLHSKY 240
           QM   +Q  +P +  +HSH+PP HS +
Sbjct: 37  QMGPEQQMWEPQMWHHHSHMPP-HSVF 62


>AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein
           protein.
          Length = 249

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = -2

Query: 320 QMVEVEQ*HQPLLPENHSHIPPLHSKY 240
           QM   +Q  +P +  +HSH+PP HS +
Sbjct: 37  QMGPEQQMWEPQMWHHHSHMPP-HSVF 62


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = -3

Query: 559 NTMGISPYNSLI 524
           N MGI PY+SL+
Sbjct: 463 NNMGIQPYDSLL 474


>AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory receptor
           candidate 35 protein.
          Length = 251

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = -2

Query: 725 VARIFTSIQETGDSIIILTYCVSTIAN 645
           +  I+T ++E+G    + TY VS   N
Sbjct: 22  IYHIYTVVEESGFENFVKTYLVSDFEN 48


>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = +3

Query: 546 IPIVLSTLWFFLAFYFN 596
           I +V+S L  F+A++FN
Sbjct: 54  IKLVVSVLMDFIAYFFN 70


>AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory receptor
           candidate 18 protein.
          Length = 387

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -3

Query: 664 VFQPLPMVLLFYKCC 620
           V++PLP+VL   K C
Sbjct: 269 VYKPLPIVLSIVKNC 283


>AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory receptor
           candidate 17 protein.
          Length = 372

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -3

Query: 664 VFQPLPMVLLFYKCC 620
           V++PLP+VL   K C
Sbjct: 269 VYKPLPIVLSIVKNC 283


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 174,678
Number of Sequences: 336
Number of extensions: 3626
Number of successful extensions: 12
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20546262
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)