Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_pT_F03
         (765 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT004850-1|AAO45206.1|  252|Drosophila melanogaster RE68138p pro...    69   5e-12
AE014134-829|AAF52190.2|  252|Drosophila melanogaster CG3792-PA ...    69   5e-12

>BT004850-1|AAO45206.1|  252|Drosophila melanogaster RE68138p
           protein.
          Length = 252

 Score = 69.3 bits (162), Expect = 5e-12
 Identities = 32/52 (61%), Positives = 39/52 (75%)
 Frame = -2

Query: 764 LSFITCFXLFGGSVARIFTSIQETGDSIIILTYCVSTIANGAIVLQMLWYWN 609
           LS  T   +F GSVARIFTSIQETGD +IILT+  ST AN  I+ Q+++YWN
Sbjct: 180 LSAATVIMMFAGSVARIFTSIQETGDFMIILTFIASTFANSVILGQLIYYWN 231


>AE014134-829|AAF52190.2|  252|Drosophila melanogaster CG3792-PA
           protein.
          Length = 252

 Score = 69.3 bits (162), Expect = 5e-12
 Identities = 32/52 (61%), Positives = 39/52 (75%)
 Frame = -2

Query: 764 LSFITCFXLFGGSVARIFTSIQETGDSIIILTYCVSTIANGAIVLQMLWYWN 609
           LS  T   +F GSVARIFTSIQETGD +IILT+  ST AN  I+ Q+++YWN
Sbjct: 180 LSAATVIMMFAGSVARIFTSIQETGDFMIILTFIASTFANSVILGQLIYYWN 231


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,939,797
Number of Sequences: 53049
Number of extensions: 601577
Number of successful extensions: 1261
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1229
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1258
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3520086471
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)