Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P17_pT_E12
(736 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC3A12.14 |cam1||calmodulin Cam1 |Schizosaccharomyces pombe|ch... 60 2e-10
SPAC926.03 |rlc1||myosin II regulatory light chain |Schizosaccha... 46 4e-06
SPAP8A3.08 |cdc4||myosin II light chain|Schizosaccharomyces pomb... 36 0.008
SPCC1682.04 |cdc31||centrin|Schizosaccharomyces pombe|chr 3|||Ma... 33 0.042
SPAC29A4.05 |cam2||myosin I light chain Cam2|Schizosaccharomyces... 30 0.39
SPAC1687.14c |||EF hand family protein, unknown role|Schizosacch... 28 1.2
SPAP7G5.04c |lys1||aminoadipate-semialdehyde dehydrogenase |Schi... 28 1.2
>SPAC3A12.14 |cam1||calmodulin Cam1 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 150
Score = 60.5 bits (140), Expect = 2e-10
Identities = 35/100 (35%), Positives = 56/100 (56%), Gaps = 6/100 (6%)
Frame = -3
Query: 626 LGRLASEKELDEMVGEA----SGPINFTQLLTLFANRMSGGSDEDDVVINAFKTFDEEGK 459
LG+ + EL +M+ E +G I+FT+ LT+ A +M +D ++ V AFK FD++G
Sbjct: 41 LGQSPTAAELQDMINEVDADGNGTIDFTEFLTMMARKMKD-TDNEEEVREAFKVFDKDGN 99
Query: 458 --IDSERLRHALMTWGDKFSADEVDEAYDQMDIDDKGYID 345
I E L H L + G++ S +EV + + D D G I+
Sbjct: 100 GYITVEELTHVLTSLGERLSQEEVADMIREADTDGDGVIN 139
Score = 38.7 bits (86), Expect = 8e-04
Identities = 17/38 (44%), Positives = 24/38 (63%)
Frame = -2
Query: 729 SQKQVAEFKEAFQXMDHDKDGIIGKNDLRATFDSPGQA 616
+ +Q+AEF+EAF D D+DG I N+L S GQ+
Sbjct: 7 TDEQIAEFREAFSLFDRDQDGNITSNELGVVMRSLGQS 44
Score = 28.7 bits (61), Expect = 0.91
Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Frame = -3
Query: 473 DEEGKID-SERLRHALMTWGDKFSADEVDEAYDQMDIDDKGYIDTTKLIAMLTA 315
D G ID +E L D + +EV EA+ D D GYI +L +LT+
Sbjct: 60 DGNGTIDFTEFLTMMARKMKDTDNEEEVREAFKVFDKDGNGYITVEELTHVLTS 113
>SPAC926.03 |rlc1||myosin II regulatory light chain
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 184
Score = 46.4 bits (105), Expect = 4e-06
Identities = 28/83 (33%), Positives = 42/83 (50%), Gaps = 2/83 (2%)
Frame = -3
Query: 632 TPLGRLASEKELDEMVGEASGPINFTQLLTLFANRMSGGSDEDDVVINAFKTFD--EEGK 459
T L + ASE ++ M + PIN LT + + S +D ++ AF TFD + GK
Sbjct: 75 TSLNQDASEDSINHMFESINPPINLAAFLTAMGSMLCRISPRND-LLEAFSTFDDTQSGK 133
Query: 458 IDSERLRHALMTWGDKFSADEVD 390
I +R AL + GD+ EV+
Sbjct: 134 IPISTMRDALSSMGDRMDPQEVE 156
Score = 34.7 bits (76), Expect = 0.014
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = -2
Query: 729 SQKQVAEFKEAFQXMDHDKDGIIGKNDLRATFDSPGQ 619
+ Q+ E KEAF +D D DG IG+ D++ S Q
Sbjct: 43 TSSQIQELKEAFALLDKDGDGNIGREDVKTMLTSLNQ 79
>SPAP8A3.08 |cdc4||myosin II light chain|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 141
Score = 35.5 bits (78), Expect = 0.008
Identities = 25/101 (24%), Positives = 49/101 (48%), Gaps = 4/101 (3%)
Frame = -3
Query: 602 ELDEMVGEASGPINFTQLLTLFANRMSGGS--DEDDVVINAFKTFDEE--GKIDSERLRH 435
E+ E+ ++ Q L + NR +G + + + F+ FD++ G I LR+
Sbjct: 43 EITEIESTLPAEVDMEQFLQVL-NRPNGFDMPGDPEEFVKGFQVFDKDATGMIGVGELRY 101
Query: 434 ALMTWGDKFSADEVDEAYDQMDIDDKGYIDTTKLIAMLTAS 312
L + G+K S +E+DE + + D G ++ + M+ A+
Sbjct: 102 VLTSLGEKLSNEEMDELLKGVPVKD-GMVNYHDFVQMILAN 141
>SPCC1682.04 |cdc31||centrin|Schizosaccharomyces pombe|chr
3|||Manual
Length = 176
Score = 33.1 bits (72), Expect = 0.042
Identities = 17/66 (25%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Frame = -3
Query: 512 DEDDVVINAFKTFDEE--GKIDSERLRHALMTWGDKFSADEVDEAYDQMDIDDKGYIDTT 339
D + + AF+ FD++ GKI LR + E++ ++ D+D G I+
Sbjct: 107 DPLEEIKRAFELFDDDETGKISLRNLRRVAKELNENIDDQELEAMIEEFDLDQDGEINEQ 166
Query: 338 KLIAML 321
+ IA++
Sbjct: 167 EFIAIM 172
Score = 29.1 bits (62), Expect = 0.69
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = -2
Query: 729 SQKQVAEFKEAFQXMDHDKDGIIGKNDLRATFDSPG 622
+++Q + EAF+ D DKD I ++LRA + G
Sbjct: 32 TEEQRQDINEAFKLFDSDKDNAIDYHELRAAMRALG 67
>SPAC29A4.05 |cam2||myosin I light chain Cam2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 143
Score = 29.9 bits (64), Expect = 0.39
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = -2
Query: 729 SQKQVAEFKEAFQXMDHDKDGIIGKNDLRATFDSPG 622
S++Q E KEAF D DKDG+I + + + S G
Sbjct: 4 SKEQTDEMKEAFVLYDIDKDGLIPTSHVGSVLRSLG 39
>SPAC1687.14c |||EF hand family protein, unknown
role|Schizosaccharomyces pombe|chr 1|||Manual
Length = 76
Score = 28.3 bits (60), Expect = 1.2
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = -3
Query: 401 DEVDEAYDQMDIDDKGYID 345
+E +EA+D D+ KGYID
Sbjct: 12 EEAEEAFDLFDVTHKGYID 30
>SPAP7G5.04c |lys1||aminoadipate-semialdehyde dehydrogenase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1419
Score = 28.3 bits (60), Expect = 1.2
Identities = 11/26 (42%), Positives = 22/26 (84%)
Frame = +1
Query: 562 LMGPEASPTISSSSFSDASLPRGVEG 639
++GP+++PT+S +S S+ +P+GV+G
Sbjct: 453 VVGPDSTPTLSFTSGSE-GIPKGVKG 477
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,383,934
Number of Sequences: 5004
Number of extensions: 40142
Number of successful extensions: 164
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 153
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 163
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 347244562
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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