Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P17_pT_E02
(794 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous t... 89 3e-18
AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous t... 89 3e-18
D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like prot... 74 1e-13
AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a... 74 1e-13
AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a... 74 1e-13
Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical pr... 73 3e-13
AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural RNA-bi... 73 3e-13
AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical ... 62 3e-10
AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical ... 62 3e-10
AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical ... 62 3e-10
AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a... 56 3e-08
AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a... 56 3e-08
AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical ... 50 3e-06
AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor pr... 50 3e-06
Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical pr... 48 8e-06
Z68297-5|CAC70081.1| 394|Caenorhabditis elegans Hypothetical pr... 47 1e-05
U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (dele... 47 1e-05
U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical pr... 47 1e-05
U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical pr... 47 1e-05
U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical pr... 47 1e-05
U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical pr... 47 1e-05
AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein. 47 1e-05
Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical pr... 47 2e-05
AJ297847-1|CAC16732.1| 619|Caenorhabditis elegans FOG-1 protein... 47 2e-05
AJ297846-1|CAC16731.1| 619|Caenorhabditis elegans FOG-1 protein... 47 2e-05
AC024810-13|AAK68518.1| 405|Caenorhabditis elegans Feminization... 47 2e-05
AC024810-12|AAK68519.1| 619|Caenorhabditis elegans Feminization... 47 2e-05
U24123-1|AAA65224.1| 646|Caenorhabditis elegans polyadenylate-b... 46 2e-05
AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical ... 46 2e-05
AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical ... 46 2e-05
Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical pr... 45 5e-05
Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical pr... 45 5e-05
Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical pr... 44 1e-04
Z77654-1|CAB01127.1| 114|Caenorhabditis elegans Hypothetical pr... 43 2e-04
U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical pr... 43 2e-04
Z50874-3|CAA90773.1| 409|Caenorhabditis elegans Hypothetical pr... 42 7e-04
Z50874-2|CAA90772.1| 357|Caenorhabditis elegans Hypothetical pr... 42 7e-04
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 42 7e-04
Z32683-11|CAA83626.1| 142|Caenorhabditis elegans Hypothetical p... 42 7e-04
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 42 7e-04
Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical pr... 41 9e-04
Z73102-13|CAA97405.1| 836|Caenorhabditis elegans Hypothetical p... 41 0.001
Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical pr... 40 0.002
AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical... 40 0.002
AC024818-2|AAF60781.1| 302|Caenorhabditis elegans Temporarily a... 40 0.002
Z49910-5|CAA90120.1| 411|Caenorhabditis elegans Hypothetical pr... 40 0.002
U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna b... 40 0.002
U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type ribon... 40 0.002
EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA... 40 0.002
EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA... 40 0.002
EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA... 40 0.002
EF523767-1|ABS18833.1| 193|Caenorhabditis elegans ELAV-type RNA... 40 0.002
EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA... 40 0.002
Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical pr... 40 0.003
Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical pr... 39 0.004
AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative RNA-... 39 0.004
Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical pr... 39 0.005
Z81037-3|CAB02750.1| 205|Caenorhabditis elegans Hypothetical pr... 38 0.006
Z78419-2|CAB01702.1| 154|Caenorhabditis elegans Hypothetical pr... 37 0.019
AC006833-6|AAF60950.1| 491|Caenorhabditis elegans Hypothetical ... 37 0.019
Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical pr... 36 0.025
Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical pr... 36 0.033
Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical pr... 36 0.033
Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical pr... 36 0.033
U23450-1|AAK31467.2| 422|Caenorhabditis elegans Cpeb polya bind... 36 0.033
U23172-15|AAN63408.1| 374|Caenorhabditis elegans Hypothetical p... 35 0.058
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 35 0.058
U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor... 35 0.077
AF067616-7|AAM98029.1| 423|Caenorhabditis elegans Hypothetical ... 35 0.077
AF067616-6|AAC19192.1| 520|Caenorhabditis elegans Hypothetical ... 35 0.077
AF067616-5|AAU05574.1| 497|Caenorhabditis elegans Hypothetical ... 35 0.077
AF003141-14|AAM48549.1| 362|Caenorhabditis elegans Hypothetical... 35 0.077
AF003141-13|AAK21490.1| 549|Caenorhabditis elegans Hypothetical... 35 0.077
AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing... 35 0.077
AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing... 35 0.077
AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing... 35 0.077
U41007-10|AAL32214.1| 118|Caenorhabditis elegans Sr protein (sp... 33 0.24
U41007-9|AAL32213.1| 153|Caenorhabditis elegans Sr protein (spl... 33 0.24
U41007-8|AAA82270.1| 179|Caenorhabditis elegans Sr protein (spl... 33 0.24
Z75552-9|CAA99945.2| 705|Caenorhabditis elegans Hypothetical pr... 33 0.31
Z75551-6|CAA99937.2| 705|Caenorhabditis elegans Hypothetical pr... 33 0.31
U23172-14|AAL02495.1| 165|Caenorhabditis elegans Hypothetical p... 33 0.31
AC024826-10|AAM97977.1| 435|Caenorhabditis elegans Hypothetical... 32 0.41
AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical ... 32 0.41
Z81120-1|CAB03342.1| 207|Caenorhabditis elegans Hypothetical pr... 31 0.72
Z66521-8|CAA91394.1| 281|Caenorhabditis elegans Hypothetical pr... 31 0.95
Z35663-4|CAA84724.1| 307|Caenorhabditis elegans Hypothetical pr... 30 1.7
U28944-8|AAK68193.1| 103|Caenorhabditis elegans Hypothetical pr... 30 1.7
Z19154-9|CAA79552.2| 559|Caenorhabditis elegans Hypothetical pr... 30 2.2
L07144-9|AAK21441.1| 737|Caenorhabditis elegans Hypothetical pr... 30 2.2
Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical pr... 29 2.9
AF003145-3|AAB57717.1| 751|Caenorhabditis elegans Cpeb polya bi... 29 2.9
AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical ... 29 3.8
AF003140-8|AAB54169.1| 396|Caenorhabditis elegans Hypothetical ... 29 5.1
>AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform a
protein.
Length = 305
Score = 89.0 bits (211), Expect = 3e-18
Identities = 41/98 (41%), Positives = 60/98 (61%), Gaps = 1/98 (1%)
Frame = -2
Query: 790 EHTINNKKVDPKKXKARHGK-IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQR 614
E TI K V+ K K+R K +FVGGL S+ S+ ++R+ F +FG + ++E PFDK R
Sbjct: 91 EQTIKGKSVEVKPAKSRENKKVFVGGLPSDYSEQDLRSHFEQFGKVDDIEWPFDKQTKAR 150
Query: 613 KGFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRATPK 500
+ F FI FE E+ + K+T G +E DVK+A P+
Sbjct: 151 RNFAFIVFEEEESADKASSQTKQTFGTRECDVKKAVPQ 188
Score = 63.3 bits (147), Expect = 2e-10
Identities = 25/75 (33%), Positives = 50/75 (66%)
Frame = -2
Query: 733 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 554
KIFVGG+S E++++++ + F+++G + + ++ +D+T + +GF F+ F + + L
Sbjct: 30 KIFVGGISPEVNNEDLSSHFTQYGEVAQAQVKYDRTNGRSRGFAFVEFTTGEGCKLALAA 89
Query: 553 PKRTIGGKEVDVKRA 509
++TI GK V+VK A
Sbjct: 90 REQTIKGKSVEVKPA 104
>AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform b
protein.
Length = 308
Score = 89.0 bits (211), Expect = 3e-18
Identities = 41/98 (41%), Positives = 60/98 (61%), Gaps = 1/98 (1%)
Frame = -2
Query: 790 EHTINNKKVDPKKXKARHGK-IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQR 614
E TI K V+ K K+R K +FVGGL S+ S+ ++R+ F +FG + ++E PFDK R
Sbjct: 91 EQTIKGKSVEVKPAKSRENKKVFVGGLPSDYSEQDLRSHFEQFGKVDDIEWPFDKQTKAR 150
Query: 613 KGFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRATPK 500
+ F FI FE E+ + K+T G +E DVK+A P+
Sbjct: 151 RNFAFIVFEEEESADKASSQTKQTFGTRECDVKKAVPQ 188
Score = 63.3 bits (147), Expect = 2e-10
Identities = 25/75 (33%), Positives = 50/75 (66%)
Frame = -2
Query: 733 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 554
KIFVGG+S E++++++ + F+++G + + ++ +D+T + +GF F+ F + + L
Sbjct: 30 KIFVGGISPEVNNEDLSSHFTQYGEVAQAQVKYDRTNGRSRGFAFVEFTTGEGCKLALAA 89
Query: 553 PKRTIGGKEVDVKRA 509
++TI GK V+VK A
Sbjct: 90 REQTIKGKSVEVKPA 104
>D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like protein
protein.
Length = 346
Score = 73.7 bits (173), Expect = 1e-13
Identities = 35/80 (43%), Positives = 50/80 (62%)
Frame = -2
Query: 733 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 554
KIFVGGL+S +DD +R F+S+FG I ++ + D T + +GF F+TF + V+ +K
Sbjct: 24 KIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQ 83
Query: 553 PKRTIGGKEVDVKRATPKPD 494
I GK VD KRA P+ D
Sbjct: 84 RPHIIDGKTVDPKRAVPRDD 103
Score = 56.0 bits (129), Expect = 3e-08
Identities = 28/109 (25%), Positives = 54/109 (49%), Gaps = 11/109 (10%)
Frame = -2
Query: 787 HTINNKKVDPKKXKARHGK-----------IFVGGLSSEISDDEIRNFFSEFGTILEVEM 641
H I+ K VDPK+ R K ++V G+ + ++D + +F+++GT+ + E+
Sbjct: 86 HIIDGKTVDPKRAVPRDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEI 145
Query: 640 PFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRATPKPD 494
DK + +GF F+TF+ V+ + + G DV++ K +
Sbjct: 146 ILDKATQKPRGFGFVTFDDHDSVDQCVLQKSHMVNGHRCDVRKGLSKDE 194
>AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform d protein.
Length = 347
Score = 73.7 bits (173), Expect = 1e-13
Identities = 35/80 (43%), Positives = 50/80 (62%)
Frame = -2
Query: 733 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 554
KIFVGGL+S +DD +R F+S+FG I ++ + D T + +GF F+TF + V+ +K
Sbjct: 24 KIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQ 83
Query: 553 PKRTIGGKEVDVKRATPKPD 494
I GK VD KRA P+ D
Sbjct: 84 RPHIIDGKTVDPKRAVPRDD 103
Score = 56.0 bits (129), Expect = 3e-08
Identities = 28/109 (25%), Positives = 54/109 (49%), Gaps = 11/109 (10%)
Frame = -2
Query: 787 HTINNKKVDPKKXKARHGK-----------IFVGGLSSEISDDEIRNFFSEFGTILEVEM 641
H I+ K VDPK+ R K ++V G+ + ++D + +F+++GT+ + E+
Sbjct: 86 HIIDGKTVDPKRAVPRDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEI 145
Query: 640 PFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRATPKPD 494
DK + +GF F+TF+ V+ + + G DV++ K +
Sbjct: 146 ILDKATQKPRGFGFVTFDDHDSVDQCVLQKSHMVNGHRCDVRKGLSKDE 194
>AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform a protein.
Length = 346
Score = 73.7 bits (173), Expect = 1e-13
Identities = 35/80 (43%), Positives = 50/80 (62%)
Frame = -2
Query: 733 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 554
KIFVGGL+S +DD +R F+S+FG I ++ + D T + +GF F+TF + V+ +K
Sbjct: 24 KIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQ 83
Query: 553 PKRTIGGKEVDVKRATPKPD 494
I GK VD KRA P+ D
Sbjct: 84 RPHIIDGKTVDPKRAVPRDD 103
Score = 56.0 bits (129), Expect = 3e-08
Identities = 28/109 (25%), Positives = 54/109 (49%), Gaps = 11/109 (10%)
Frame = -2
Query: 787 HTINNKKVDPKKXKARHGK-----------IFVGGLSSEISDDEIRNFFSEFGTILEVEM 641
H I+ K VDPK+ R K ++V G+ + ++D + +F+++GT+ + E+
Sbjct: 86 HIIDGKTVDPKRAVPRDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEI 145
Query: 640 PFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRATPKPD 494
DK + +GF F+TF+ V+ + + G DV++ K +
Sbjct: 146 ILDKATQKPRGFGFVTFDDHDSVDQCVLQKSHMVNGHRCDVRKGLSKDE 194
>Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical
protein R10E9.1 protein.
Length = 320
Score = 72.5 bits (170), Expect = 3e-13
Identities = 34/106 (32%), Positives = 62/106 (58%), Gaps = 9/106 (8%)
Frame = -2
Query: 790 EHTINNKKVDPK---------KXKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMP 638
EH ++ KK+DPK K + K+F+GGLS+ + ++++ +F +G + + +
Sbjct: 107 EHELDGKKIDPKVAFPKRTQAKLVTKTKKVFIGGLSATSTLEDMKQYFETYGKVEDAMLM 166
Query: 637 FDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRATPK 500
FDK + +GF F+TF+S++V + + + I GK V+ K+A PK
Sbjct: 167 FDKATQRHRGFGFVTFDSDEVADKVCEIHFHEINGKMVECKKAQPK 212
Score = 60.9 bits (141), Expect = 1e-09
Identities = 31/97 (31%), Positives = 50/97 (51%)
Frame = -2
Query: 790 EHTINNKKVDPKKXKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRK 611
E +N D GK+F+GGLS + + + +R++F FG + E + D + +
Sbjct: 27 EARLNADSDDGSHGSQDPGKMFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRAR 86
Query: 610 GFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRATPK 500
GF FITF V+ +L + + GK++D K A PK
Sbjct: 87 GFGFITFVDPSSVDKVLNNREHELDGKKIDPKVAFPK 123
>AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural
RNA-binding protein MSI-1 protein.
Length = 320
Score = 72.5 bits (170), Expect = 3e-13
Identities = 34/106 (32%), Positives = 62/106 (58%), Gaps = 9/106 (8%)
Frame = -2
Query: 790 EHTINNKKVDPK---------KXKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMP 638
EH ++ KK+DPK K + K+F+GGLS+ + ++++ +F +G + + +
Sbjct: 107 EHELDGKKIDPKVAFPKRTQAKLVTKTKKVFIGGLSATSTLEDMKQYFETYGKVEDAMLM 166
Query: 637 FDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRATPK 500
FDK + +GF F+TF+S++V + + + I GK V+ K+A PK
Sbjct: 167 FDKATQRHRGFGFVTFDSDEVADKVCEIHFHEINGKMVECKKAQPK 212
Score = 60.9 bits (141), Expect = 1e-09
Identities = 31/97 (31%), Positives = 50/97 (51%)
Frame = -2
Query: 790 EHTINNKKVDPKKXKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRK 611
E +N D GK+F+GGLS + + + +R++F FG + E + D + +
Sbjct: 27 EARLNADSDDGSHGSQDPGKMFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRAR 86
Query: 610 GFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRATPK 500
GF FITF V+ +L + + GK++D K A PK
Sbjct: 87 GFGFITFVDPSSVDKVLNNREHELDGKKIDPKVAFPK 123
>AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical
protein H28G03.1b protein.
Length = 315
Score = 62.5 bits (145), Expect = 3e-10
Identities = 27/78 (34%), Positives = 46/78 (58%)
Frame = -2
Query: 733 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 554
K+F+GGLS + +D+++ N+FS++G +++ + D +GF F+TF S +
Sbjct: 50 KLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMND 109
Query: 553 PKRTIGGKEVDVKRATPK 500
+GGK VD KRA P+
Sbjct: 110 RPHKLGGKTVDSKRAIPR 127
>AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical
protein H28G03.1c protein.
Length = 335
Score = 62.5 bits (145), Expect = 3e-10
Identities = 27/78 (34%), Positives = 46/78 (58%)
Frame = -2
Query: 733 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 554
K+F+GGLS + +D+++ N+FS++G +++ + D +GF F+TF S +
Sbjct: 70 KLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMND 129
Query: 553 PKRTIGGKEVDVKRATPK 500
+GGK VD KRA P+
Sbjct: 130 RPHKLGGKTVDSKRAIPR 147
>AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical
protein H28G03.1a protein.
Length = 336
Score = 62.5 bits (145), Expect = 3e-10
Identities = 27/78 (34%), Positives = 46/78 (58%)
Frame = -2
Query: 733 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 554
K+F+GGLS + +D+++ N+FS++G +++ + D +GF F+TF S +
Sbjct: 71 KLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMND 130
Query: 553 PKRTIGGKEVDVKRATPK 500
+GGK VD KRA P+
Sbjct: 131 RPHKLGGKTVDSKRAIPR 148
>AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform b protein.
Length = 309
Score = 56.0 bits (129), Expect = 3e-08
Identities = 28/109 (25%), Positives = 54/109 (49%), Gaps = 11/109 (10%)
Frame = -2
Query: 787 HTINNKKVDPKKXKARHGK-----------IFVGGLSSEISDDEIRNFFSEFGTILEVEM 641
H I+ K VDPK+ R K ++V G+ + ++D + +F+++GT+ + E+
Sbjct: 48 HIIDGKTVDPKRAVPRDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEI 107
Query: 640 PFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRATPKPD 494
DK + +GF F+TF+ V+ + + G DV++ K +
Sbjct: 108 ILDKATQKPRGFGFVTFDDHDSVDQCVLQKSHMVNGHRCDVRKGLSKDE 156
Score = 54.0 bits (124), Expect = 1e-07
Identities = 25/65 (38%), Positives = 38/65 (58%)
Frame = -2
Query: 688 IRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRA 509
+R F+S+FG I ++ + D T + +GF F+TF + V+ +K I GK VD KRA
Sbjct: 1 MREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRA 60
Query: 508 TPKPD 494
P+ D
Sbjct: 61 VPRDD 65
>AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform c protein.
Length = 308
Score = 56.0 bits (129), Expect = 3e-08
Identities = 28/109 (25%), Positives = 54/109 (49%), Gaps = 11/109 (10%)
Frame = -2
Query: 787 HTINNKKVDPKKXKARHGK-----------IFVGGLSSEISDDEIRNFFSEFGTILEVEM 641
H I+ K VDPK+ R K ++V G+ + ++D + +F+++GT+ + E+
Sbjct: 48 HIIDGKTVDPKRAVPRDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEI 107
Query: 640 PFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRATPKPD 494
DK + +GF F+TF+ V+ + + G DV++ K +
Sbjct: 108 ILDKATQKPRGFGFVTFDDHDSVDQCVLQKSHMVNGHRCDVRKGLSKDE 156
Score = 54.0 bits (124), Expect = 1e-07
Identities = 25/65 (38%), Positives = 38/65 (58%)
Frame = -2
Query: 688 IRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRA 509
+R F+S+FG I ++ + D T + +GF F+TF + V+ +K I GK VD KRA
Sbjct: 1 MREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRA 60
Query: 508 TPKPD 494
P+ D
Sbjct: 61 VPRDD 65
>AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical
protein Y46G5A.13 protein.
Length = 434
Score = 49.6 bits (113), Expect = 3e-06
Identities = 27/89 (30%), Positives = 45/89 (50%), Gaps = 1/89 (1%)
Frame = -2
Query: 757 KKXKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF-ESE 581
K +RH +FVG L SEI ++R F +FG + E ++ D N+ KG+ F+++ E
Sbjct: 125 KPETSRHFHVFVGDLCSEIDSTKLREAFVKFGEVSEAKIIRDNNTNKGKGYGFVSYPRRE 184
Query: 580 QVVNDLLKTPKRTIGGKEVDVKRATPKPD 494
+ + +G + + AT KPD
Sbjct: 185 DAERAIDEMNGAWLGRRTIRTNWATRKPD 213
Score = 32.7 bits (71), Expect = 0.31
Identities = 22/75 (29%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Frame = -2
Query: 745 ARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFES-EQVVN 569
A + ++VG +++ + +DEIR F FG I EV + +G+ F+ FE+ E
Sbjct: 253 ADNTSVYVGNIAN-LGEDEIRRAFDRFGPINEVR------TFKIQGYAFVKFETKESAAR 305
Query: 568 DLLKTPKRTIGGKEV 524
+++ IGG+ V
Sbjct: 306 AIVQMNNADIGGQIV 320
>AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor
protein 12 protein.
Length = 248
Score = 49.6 bits (113), Expect = 3e-06
Identities = 24/75 (32%), Positives = 37/75 (49%)
Frame = -2
Query: 733 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 554
KIFVGGL SD + +F +FG I E + D+ + +G+ F+T + K
Sbjct: 36 KIFVGGLPYHTSDKTLHEYFEQFGDIEEAVVITDRNTQKSRGYGFVTMKDRASAERACKD 95
Query: 553 PKRTIGGKEVDVKRA 509
P I G++ +V A
Sbjct: 96 PNPIIDGRKANVNLA 110
>Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical
protein F56A8.6 protein.
Length = 336
Score = 48.0 bits (109), Expect = 8e-06
Identities = 20/51 (39%), Positives = 33/51 (64%)
Frame = -2
Query: 730 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQ 578
+FVG +S ++S+D IR+ FS+ G +L ++M D+ + KG+ FI F Q
Sbjct: 20 VFVGNISYDVSEDTIRSIFSKAGNVLSIKMVHDRETGKPKGYGFIEFPDIQ 70
>Z68297-5|CAC70081.1| 394|Caenorhabditis elegans Hypothetical
protein F11A10.7 protein.
Length = 394
Score = 47.2 bits (107), Expect = 1e-05
Identities = 27/76 (35%), Positives = 41/76 (53%), Gaps = 2/76 (2%)
Frame = -2
Query: 790 EHTINNKKVDPKKXK-ARHGKIFVGGLSSEISDDEIRNFFS-EFGTILEVEMPFDKTKNQ 617
+H I KV KK + + IFVG L EI++D + FFS + G + V + DK +
Sbjct: 227 DHVIRVDKVGSKKKEFGKDMAIFVGNLPFEITEDALITFFSAQIGPVEAVRIVRDKDTGK 286
Query: 616 RKGFCFITFESEQVVN 569
KGF F+ F+ + V+
Sbjct: 287 GKGFAFVNFKQDSSVS 302
Score = 31.5 bits (68), Expect = 0.72
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = -2
Query: 730 IFVGGLSSEISDDEIRNFFSEFGTILEVEM 641
+FVG + +++ +R FS+FGTI V M
Sbjct: 145 VFVGNMPLTMNEKSVRRIFSDFGTISSVRM 174
>U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (deleted
in azoospermia)homolog protein 1 protein.
Length = 498
Score = 47.2 bits (107), Expect = 1e-05
Identities = 24/64 (37%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Frame = -2
Query: 733 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLK- 557
+IFVGG + ++ E+R F +F + +V+M Q KG+ FITFE+E ++ K
Sbjct: 67 RIFVGGFPTSTTETELREHFEKFFAVKDVKM-VKSLDGQSKGYGFITFETEDQAEEIRKL 125
Query: 556 TPKR 545
TPK+
Sbjct: 126 TPKQ 129
>U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical
protein C18A3.5f protein.
Length = 295
Score = 47.2 bits (107), Expect = 1e-05
Identities = 23/83 (27%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
Frame = -2
Query: 742 RHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF-ESEQVVND 566
RH +FVG LSSE+ + ++R F FG + + ++ D + KG+ F+++ + E+
Sbjct: 20 RHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERA 79
Query: 565 LLKTPKRTIGGKEVDVKRATPKP 497
+ + + +G + + AT KP
Sbjct: 80 IEQMNGQWLGRRTIRTNWATRKP 102
Score = 33.9 bits (74), Expect = 0.13
Identities = 19/70 (27%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
Frame = -2
Query: 730 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFES-EQVVNDLLKT 554
++VG ++S +++DEIR F+ FG I EV + + +G+ F+ F++ + +++
Sbjct: 130 VYVGNIAS-LTEDEIRQGFASFGRITEVRI------FKMQGYAFVKFDNKDAAAKAIVQM 182
Query: 553 PKRTIGGKEV 524
+ +GG+ V
Sbjct: 183 NNQDVGGQLV 192
>U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical
protein C18A3.5e protein.
Length = 305
Score = 47.2 bits (107), Expect = 1e-05
Identities = 23/83 (27%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
Frame = -2
Query: 742 RHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF-ESEQVVND 566
RH +FVG LSSE+ + ++R F FG + + ++ D + KG+ F+++ + E+
Sbjct: 30 RHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERA 89
Query: 565 LLKTPKRTIGGKEVDVKRATPKP 497
+ + + +G + + AT KP
Sbjct: 90 IEQMNGQWLGRRTIRTNWATRKP 112
Score = 33.9 bits (74), Expect = 0.13
Identities = 19/70 (27%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
Frame = -2
Query: 730 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFES-EQVVNDLLKT 554
++VG ++S +++DEIR F+ FG I EV + + +G+ F+ F++ + +++
Sbjct: 140 VYVGNIAS-LTEDEIRQGFASFGRITEVRI------FKMQGYAFVKFDNKDAAAKAIVQM 192
Query: 553 PKRTIGGKEV 524
+ +GG+ V
Sbjct: 193 NNQDVGGQLV 202
>U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical
protein C18A3.5a protein.
Length = 408
Score = 47.2 bits (107), Expect = 1e-05
Identities = 23/83 (27%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
Frame = -2
Query: 742 RHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF-ESEQVVND 566
RH +FVG LSSE+ + ++R F FG + + ++ D + KG+ F+++ + E+
Sbjct: 133 RHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERA 192
Query: 565 LLKTPKRTIGGKEVDVKRATPKP 497
+ + + +G + + AT KP
Sbjct: 193 IEQMNGQWLGRRTIRTNWATRKP 215
Score = 33.9 bits (74), Expect = 0.13
Identities = 19/70 (27%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
Frame = -2
Query: 730 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFES-EQVVNDLLKT 554
++VG ++S +++DEIR F+ FG I EV + + +G+ F+ F++ + +++
Sbjct: 243 VYVGNIAS-LTEDEIRQGFASFGRITEVRI------FKMQGYAFVKFDNKDAAAKAIVQM 295
Query: 553 PKRTIGGKEV 524
+ +GG+ V
Sbjct: 296 NNQDVGGQLV 305
>U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical
protein C18A3.5b protein.
Length = 376
Score = 47.2 bits (107), Expect = 1e-05
Identities = 23/83 (27%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
Frame = -2
Query: 742 RHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF-ESEQVVND 566
RH +FVG LSSE+ + ++R F FG + + ++ D + KG+ F+++ + E+
Sbjct: 101 RHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERA 160
Query: 565 LLKTPKRTIGGKEVDVKRATPKP 497
+ + + +G + + AT KP
Sbjct: 161 IEQMNGQWLGRRTIRTNWATRKP 183
Score = 33.9 bits (74), Expect = 0.13
Identities = 19/70 (27%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
Frame = -2
Query: 730 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFES-EQVVNDLLKT 554
++VG ++S +++DEIR F+ FG I EV + + +G+ F+ F++ + +++
Sbjct: 211 VYVGNIAS-LTEDEIRQGFASFGRITEVRI------FKMQGYAFVKFDNKDAAAKAIVQM 263
Query: 553 PKRTIGGKEV 524
+ +GG+ V
Sbjct: 264 NNQDVGGQLV 273
Score = 31.9 bits (69), Expect = 0.54
Identities = 11/36 (30%), Positives = 24/36 (66%)
Frame = -2
Query: 730 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTK 623
++VG L S +++D I F++ G++ + ++ FD+ K
Sbjct: 48 LYVGNLDSTVTEDFIATLFNQIGSVTKTKVIFDEMK 83
>AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein.
Length = 499
Score = 47.2 bits (107), Expect = 1e-05
Identities = 24/64 (37%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Frame = -2
Query: 733 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLK- 557
+IFVGG + ++ E+R F +F + +V+M Q KG+ FITFE+E ++ K
Sbjct: 68 RIFVGGFPTSTTETELREHFEKFFAVKDVKM-VKSLDGQSKGYGFITFETEDQAEEIRKL 126
Query: 556 TPKR 545
TPK+
Sbjct: 127 TPKQ 130
>Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical
protein C07A4.1 protein.
Length = 360
Score = 46.8 bits (106), Expect = 2e-05
Identities = 18/70 (25%), Positives = 44/70 (62%)
Frame = -2
Query: 787 HTINNKKVDPKKXKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKG 608
H+ + ++ + ++H +FVG LS ++S++ +++ F++FG + E ++ D + KG
Sbjct: 118 HSASEPPMEMRIDTSKHFHVFVGDLSKDVSNELLKSTFTKFGEVSEAKVIRDVQTQKSKG 177
Query: 607 FCFITFESEQ 578
+ F++F ++Q
Sbjct: 178 YGFVSFPNKQ 187
>AJ297847-1|CAC16732.1| 619|Caenorhabditis elegans FOG-1 protein
protein.
Length = 619
Score = 46.8 bits (106), Expect = 2e-05
Identities = 22/61 (36%), Positives = 33/61 (54%)
Frame = -2
Query: 739 HGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLL 560
H +F+GGL ++ +EI FSEFG +L V + D+ KG +TFE + N L
Sbjct: 318 HRTVFLGGLPRIVTAEEIAQMFSEFGVVLLVTIDIDQDYGYPKGAARVTFERDSAFNRAL 377
Query: 559 K 557
+
Sbjct: 378 E 378
Score = 37.5 bits (83), Expect = 0.011
Identities = 24/89 (26%), Positives = 39/89 (43%), Gaps = 8/89 (8%)
Frame = -2
Query: 787 HTINNKKVDPKKXKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQR-- 614
HT+ + + K+FVGG+S ++ I FF +FGT+ V+ P + N R
Sbjct: 188 HTVVKNHRNENNQRVVSNKVFVGGISHMMNRKIINKFFGQFGTVF-VDWPVKQKPNSRGK 246
Query: 613 ------KGFCFITFESEQVVNDLLKTPKR 545
+ F+ + EQ V L+ R
Sbjct: 247 SIAIGSYSYLFLVYSDEQSVIKLMSACHR 275
>AJ297846-1|CAC16731.1| 619|Caenorhabditis elegans FOG-1 protein
protein.
Length = 619
Score = 46.8 bits (106), Expect = 2e-05
Identities = 22/61 (36%), Positives = 33/61 (54%)
Frame = -2
Query: 739 HGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLL 560
H +F+GGL ++ +EI FSEFG +L V + D+ KG +TFE + N L
Sbjct: 318 HRTVFLGGLPRIVTAEEIAQMFSEFGVVLLVTIDIDQDYGYPKGAARVTFERDSAFNRAL 377
Query: 559 K 557
+
Sbjct: 378 E 378
Score = 37.5 bits (83), Expect = 0.011
Identities = 24/89 (26%), Positives = 39/89 (43%), Gaps = 8/89 (8%)
Frame = -2
Query: 787 HTINNKKVDPKKXKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQR-- 614
HT+ + + K+FVGG+S ++ I FF +FGT+ V+ P + N R
Sbjct: 188 HTVVKNHRNENNQRVVSNKVFVGGISHMMNRKIINKFFGQFGTVF-VDWPVKQKPNSRGK 246
Query: 613 ------KGFCFITFESEQVVNDLLKTPKR 545
+ F+ + EQ V L+ R
Sbjct: 247 SIAIGSYSYLFLVYSDEQSVIKLMSACHR 275
>AC024810-13|AAK68518.1| 405|Caenorhabditis elegans Feminization of
germline protein1, isoform a protein.
Length = 405
Score = 46.8 bits (106), Expect = 2e-05
Identities = 22/61 (36%), Positives = 33/61 (54%)
Frame = -2
Query: 739 HGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLL 560
H +F+GGL ++ +EI FSEFG +L V + D+ KG +TFE + N L
Sbjct: 104 HRTVFLGGLPRIVTAEEIAQMFSEFGVVLLVTIDIDQDYGYPKGAARVTFERDSAFNRAL 163
Query: 559 K 557
+
Sbjct: 164 E 164
>AC024810-12|AAK68519.1| 619|Caenorhabditis elegans Feminization of
germline protein1, isoform b protein.
Length = 619
Score = 46.8 bits (106), Expect = 2e-05
Identities = 22/61 (36%), Positives = 33/61 (54%)
Frame = -2
Query: 739 HGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLL 560
H +F+GGL ++ +EI FSEFG +L V + D+ KG +TFE + N L
Sbjct: 318 HRTVFLGGLPRIVTAEEIAQMFSEFGVVLLVTIDIDQDYGYPKGAARVTFERDSAFNRAL 377
Query: 559 K 557
+
Sbjct: 378 E 378
Score = 37.5 bits (83), Expect = 0.011
Identities = 24/89 (26%), Positives = 39/89 (43%), Gaps = 8/89 (8%)
Frame = -2
Query: 787 HTINNKKVDPKKXKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQR-- 614
HT+ + + K+FVGG+S ++ I FF +FGT+ V+ P + N R
Sbjct: 188 HTVVKNHRNENNQRVVSNKVFVGGISHMMNRKIINKFFGQFGTVF-VDWPVKQKPNSRGK 246
Query: 613 ------KGFCFITFESEQVVNDLLKTPKR 545
+ F+ + EQ V L+ R
Sbjct: 247 SIAIGSYSYLFLVYSDEQSVIKLMSACHR 275
>U24123-1|AAA65224.1| 646|Caenorhabditis elegans
polyadenylate-binding protein protein.
Length = 646
Score = 46.4 bits (105), Expect = 2e-05
Identities = 28/89 (31%), Positives = 45/89 (50%), Gaps = 1/89 (1%)
Frame = -2
Query: 763 DPKKXKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFES 584
DP ++ G IF+ L I + I + FS FG IL ++ D+ KG+ F+ FE+
Sbjct: 111 DPAMRRSGAGNIFIKNLDKVIDNKSIYDTFSLFGNILSCKVAIDE-DGFSKGYGFVHFET 169
Query: 583 EQVV-NDLLKTPKRTIGGKEVDVKRATPK 500
E+ N + K + GK+V V + P+
Sbjct: 170 EEAAQNAIQKVNGMLLAGKKVFVGKFQPR 198
>AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical
protein Y106G6H.2b protein.
Length = 583
Score = 46.4 bits (105), Expect = 2e-05
Identities = 28/89 (31%), Positives = 45/89 (50%), Gaps = 1/89 (1%)
Frame = -2
Query: 763 DPKKXKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFES 584
DP ++ G IF+ L I + I + FS FG IL ++ D+ KG+ F+ FE+
Sbjct: 48 DPAMRRSGAGNIFIKNLDKVIDNKSIYDTFSLFGNILSCKVAIDE-DGFSKGYGFVHFET 106
Query: 583 EQVV-NDLLKTPKRTIGGKEVDVKRATPK 500
E+ N + K + GK+V V + P+
Sbjct: 107 EEAAQNAIQKVNGMLLAGKKVFVGKFQPR 135
>AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical
protein Y106G6H.2a protein.
Length = 646
Score = 46.4 bits (105), Expect = 2e-05
Identities = 28/89 (31%), Positives = 45/89 (50%), Gaps = 1/89 (1%)
Frame = -2
Query: 763 DPKKXKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFES 584
DP ++ G IF+ L I + I + FS FG IL ++ D+ KG+ F+ FE+
Sbjct: 111 DPAMRRSGAGNIFIKNLDKVIDNKSIYDTFSLFGNILSCKVAIDE-DGFSKGYGFVHFET 169
Query: 583 EQVV-NDLLKTPKRTIGGKEVDVKRATPK 500
E+ N + K + GK+V V + P+
Sbjct: 170 EEAAQNAIQKVNGMLLAGKKVFVGKFQPR 198
>Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical
protein F18H3.3b protein.
Length = 566
Score = 45.2 bits (102), Expect = 5e-05
Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Frame = -2
Query: 730 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFES-EQVVNDLLKT 554
++V + +++DD +R+ FS FGTI ++ D+ + KGF F+ FE E+ +
Sbjct: 345 LYVKNIEEDLNDDGLRDHFSSFGTITSAKVMVDE-NGRSKGFGFVCFEKPEEATAAVTDM 403
Query: 553 PKRTIGGKEVDVKRATPKPD 494
+ IG K + V A K D
Sbjct: 404 NSKMIGAKPLYVALAQRKED 423
Score = 43.6 bits (98), Expect = 2e-04
Identities = 28/85 (32%), Positives = 43/85 (50%), Gaps = 7/85 (8%)
Frame = -2
Query: 763 DPKKXKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFES 584
DP +A +G IF+ L I + + + FS FG IL ++ D N KG+ F+ FE+
Sbjct: 136 DPAARRAGNGNIFIKNLDRVIDNKSVYDTFSLFGNILSCKVATDDEGNS-KGYGFVHFET 194
Query: 583 E-------QVVNDLLKTPKRTIGGK 530
E + VN +L + K+ GK
Sbjct: 195 EHSAQTAIEKVNGMLLSDKKVYVGK 219
Score = 29.5 bits (63), Expect = 2.9
Identities = 13/62 (20%), Positives = 28/62 (45%)
Frame = -2
Query: 742 RHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDL 563
++ +FV + +++ FS+FG I + D + + KGF F+ F +
Sbjct: 236 KYTNVFVKNFGEHLDQEKLSAMFSKFGEITSAVVMTD-AQGKPKGFGFVAFADQDAAGQA 294
Query: 562 LK 557
++
Sbjct: 295 VE 296
>Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical
protein F18H3.3a protein.
Length = 692
Score = 45.2 bits (102), Expect = 5e-05
Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Frame = -2
Query: 730 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFES-EQVVNDLLKT 554
++V + +++DD +R+ FS FGTI ++ D+ + KGF F+ FE E+ +
Sbjct: 345 LYVKNIEEDLNDDGLRDHFSSFGTITSAKVMVDE-NGRSKGFGFVCFEKPEEATAAVTDM 403
Query: 553 PKRTIGGKEVDVKRATPKPD 494
+ IG K + V A K D
Sbjct: 404 NSKMIGAKPLYVALAQRKED 423
Score = 43.6 bits (98), Expect = 2e-04
Identities = 28/85 (32%), Positives = 43/85 (50%), Gaps = 7/85 (8%)
Frame = -2
Query: 763 DPKKXKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFES 584
DP +A +G IF+ L I + + + FS FG IL ++ D N KG+ F+ FE+
Sbjct: 136 DPAARRAGNGNIFIKNLDRVIDNKSVYDTFSLFGNILSCKVATDDEGNS-KGYGFVHFET 194
Query: 583 E-------QVVNDLLKTPKRTIGGK 530
E + VN +L + K+ GK
Sbjct: 195 EHSAQTAIEKVNGMLLSDKKVYVGK 219
Score = 29.5 bits (63), Expect = 2.9
Identities = 13/62 (20%), Positives = 28/62 (45%)
Frame = -2
Query: 742 RHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDL 563
++ +FV + +++ FS+FG I + D + + KGF F+ F +
Sbjct: 236 KYTNVFVKNFGEHLDQEKLSAMFSKFGEITSAVVMTD-AQGKPKGFGFVAFADQDAAGQA 294
Query: 562 LK 557
++
Sbjct: 295 VE 296
>Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical
protein F22B5.2 protein.
Length = 256
Score = 44.0 bits (99), Expect = 1e-04
Identities = 18/47 (38%), Positives = 29/47 (61%)
Frame = -2
Query: 724 VGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFES 584
V L E+++DE+R+ F + G ++ + + DK KGF F+TFES
Sbjct: 180 VTNLPQEMNEDELRDLFGKIGRVIRIFIARDKVTGLPKGFAFVTFES 226
>Z77654-1|CAB01127.1| 114|Caenorhabditis elegans Hypothetical
protein C50B8.1 protein.
Length = 114
Score = 43.2 bits (97), Expect = 2e-04
Identities = 23/94 (24%), Positives = 42/94 (44%)
Frame = -2
Query: 784 TINNKKVDPKKXKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGF 605
T N K+ + K +++ + ++ ++F +G+I V M +D +GF
Sbjct: 9 TTNISKLIEARPKNTGQTVYLTHVKWVTGKSQLEHYFKRYGSIQSVNMFYDPDTGLHRGF 68
Query: 604 CFITFESEQVVNDLLKTPKRTIGGKEVDVKRATP 503
ITF+S+ N ++ I G VDV+ P
Sbjct: 69 ASITFDSKDGANKAIEQRPHVIDGDRVDVEPYIP 102
>U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical
protein C30B5.4 protein.
Length = 302
Score = 43.2 bits (97), Expect = 2e-04
Identities = 15/51 (29%), Positives = 33/51 (64%)
Frame = -2
Query: 730 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQ 578
I++GGLS +S+ ++ FS++G ++ + + DK + KGF F+ ++ ++
Sbjct: 40 IYIGGLSYALSEGDVIAVFSQYGEVMNINLIRDKDTGKSKGFAFLCYKDQR 90
>Z50874-3|CAA90773.1| 409|Caenorhabditis elegans Hypothetical
protein R10E4.2b protein.
Length = 409
Score = 41.5 bits (93), Expect = 7e-04
Identities = 18/51 (35%), Positives = 28/51 (54%)
Frame = -2
Query: 730 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQ 578
+++ GL +DD +R S++G I + DK N KG+ F+ FES Q
Sbjct: 109 LYIRGLMPNTNDDLLREMCSKYGNIASTKAIMDKATNNCKGYGFVDFESPQ 159
>Z50874-2|CAA90772.1| 357|Caenorhabditis elegans Hypothetical
protein R10E4.2a protein.
Length = 357
Score = 41.5 bits (93), Expect = 7e-04
Identities = 18/51 (35%), Positives = 28/51 (54%)
Frame = -2
Query: 730 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQ 578
+++ GL +DD +R S++G I + DK N KG+ F+ FES Q
Sbjct: 83 LYIRGLMPNTNDDLLREMCSKYGNIASTKAIMDKATNNCKGYGFVDFESPQ 133
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 41.5 bits (93), Expect = 7e-04
Identities = 21/76 (27%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Frame = -2
Query: 730 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTP 551
I+VGGL ++S+ + + G ++ V MP D+ +GF F+ F E+ + +K
Sbjct: 15 IYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDADYAIKIL 74
Query: 550 KR-TIGGKEVDVKRAT 506
+ GK + V +A+
Sbjct: 75 NMIKLYGKPIKVNKAS 90
Score = 39.5 bits (88), Expect = 0.003
Identities = 25/74 (33%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
Frame = -2
Query: 775 NKKVDPKKXKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEV-EMPFDKTKNQRKGFCF 599
NK +K IFVG L E+ + + + FS FG IL+V ++ D KGF F
Sbjct: 87 NKASAHEKNMDVGANIFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMRDVDSGTSKGFAF 146
Query: 598 ITFESEQVVNDLLK 557
I F S + + L+
Sbjct: 147 INFASFEASDTALE 160
>Z32683-11|CAA83626.1| 142|Caenorhabditis elegans Hypothetical
protein R07E5.14 protein.
Length = 142
Score = 41.5 bits (93), Expect = 7e-04
Identities = 18/72 (25%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Frame = -2
Query: 730 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTP 551
+FV + E ++D++ + FSE+G I + + D+ KG+ + +E+++ N+ +
Sbjct: 57 VFVTNIHEEATEDDVHDKFSEYGKIKNIHLNLDRRTGFLKGYALVEYETQKEANEAIDQS 116
Query: 550 KRT-IGGKEVDV 518
T + G+ V V
Sbjct: 117 NDTDLLGQNVKV 128
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 41.5 bits (93), Expect = 7e-04
Identities = 21/76 (27%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Frame = -2
Query: 730 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTP 551
I+VGGL ++S+ + + G ++ V MP D+ +GF F+ F E+ + +K
Sbjct: 25 IYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDADYAIKIL 84
Query: 550 KR-TIGGKEVDVKRAT 506
+ GK + V +A+
Sbjct: 85 NMIKLYGKPIKVNKAS 100
Score = 39.5 bits (88), Expect = 0.003
Identities = 25/74 (33%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
Frame = -2
Query: 775 NKKVDPKKXKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEV-EMPFDKTKNQRKGFCF 599
NK +K IFVG L E+ + + + FS FG IL+V ++ D KGF F
Sbjct: 97 NKASAHEKNMDVGANIFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMRDVDSGTSKGFAF 156
Query: 598 ITFESEQVVNDLLK 557
I F S + + L+
Sbjct: 157 INFASFEASDTALE 170
>Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical
protein F35H8.5 protein.
Length = 456
Score = 41.1 bits (92), Expect = 9e-04
Identities = 26/79 (32%), Positives = 43/79 (54%), Gaps = 3/79 (3%)
Frame = -2
Query: 730 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFES-EQVVNDLLKT 554
+FV LSS+ D + FS+FG I+ V++ D T+ Q KG+ F++ + + N +L
Sbjct: 376 LFVYNLSSDTDDTLLWQLFSQFGAIVNVKILRDLTQ-QCKGYAFVSMSNYTEAYNAMLSL 434
Query: 553 PKRTIGGKEVDV--KRATP 503
+ GK + V K +TP
Sbjct: 435 NGTNLAGKTLQVVFKSSTP 453
>Z73102-13|CAA97405.1| 836|Caenorhabditis elegans Hypothetical
protein B0035.12 protein.
Length = 836
Score = 40.7 bits (91), Expect = 0.001
Identities = 22/78 (28%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Frame = -2
Query: 733 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 554
K+FV + + +DDE++ FS+FGT+ V K + KG F+ F++E + +
Sbjct: 684 KVFVRNVHFQATDDELKALFSKFGTVTSVRRVTHK-DGKPKGIAFVDFDTEASAQKCVAS 742
Query: 553 -PKRTIGGKEVDVKRATP 503
K + +E++V + P
Sbjct: 743 GDKLMLRERELEVALSNP 760
>Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical
protein R09B3.2 protein.
Length = 83
Score = 40.3 bits (90), Expect = 0.002
Identities = 17/50 (34%), Positives = 28/50 (56%)
Frame = -2
Query: 730 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESE 581
++VG + +++E+ NFFS G I V + D+ + +GF FI F E
Sbjct: 7 VYVGNAPFQTTEEELGNFFSSIGQINNVRIVCDRETGRPRGFAFIEFAEE 56
>AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical
protein Y116A8C.34 protein.
Length = 331
Score = 40.3 bits (90), Expect = 0.002
Identities = 19/81 (23%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
Frame = -2
Query: 742 RHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFE-SEQVVND 566
R ++VGG + ++++ + F FG ++ + +P D + +GF F+ F+ +E
Sbjct: 9 RKRTLYVGGFTEDVTEKVLMAAFIPFGDVVAISIPMDYESGKHRGFGFVEFDMAEDAAMA 68
Query: 565 LLKTPKRTIGGKEVDVKRATP 503
+ + + GK + V A P
Sbjct: 69 IDNMNESELFGKTIRVNFARP 89
>AC024818-2|AAF60781.1| 302|Caenorhabditis elegans Temporarily
assigned gene nameprotein 262 protein.
Length = 302
Score = 40.3 bits (90), Expect = 0.002
Identities = 17/79 (21%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Frame = -2
Query: 733 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF-ESEQVVNDLLK 557
++F G L +E+SD+ + F ++ + + ++ + N+ KG+ F++F +SE V + +
Sbjct: 204 RVFCGDLGNEVSDELLAKAFRKYPSFQKAKVVRESRTNKSKGYGFVSFRDSEDYVRAMRE 263
Query: 556 TPKRTIGGKEVDVKRATPK 500
+ +G + + ++++ K
Sbjct: 264 MDGKYVGNRPIKLRKSAWK 282
>Z49910-5|CAA90120.1| 411|Caenorhabditis elegans Hypothetical
protein F44G4.4a protein.
Length = 411
Score = 39.9 bits (89), Expect = 0.002
Identities = 21/72 (29%), Positives = 37/72 (51%)
Frame = -2
Query: 730 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTP 551
+ V G+ + +D+ + +F + GT++ E+ K+ KGF F+ S N +L P
Sbjct: 175 LIVLGVDFKTTDECFQKYFEDIGTVVFCEIK-RKSDGNSKGFGFVRMSSVGEQNKVLAIP 233
Query: 550 KRTIGGKEVDVK 515
+ I G+ DVK
Sbjct: 234 QHMIDGRRCDVK 245
Score = 37.1 bits (82), Expect = 0.014
Identities = 25/108 (23%), Positives = 48/108 (44%), Gaps = 9/108 (8%)
Frame = -2
Query: 790 EHTINNKKVDPKKXKARH-------GKIFVGGLSSEISDDEIRNFFS-EFGTILEVEMPF 635
+H I+ ++ D K R +IFVG L+ ++ + ++R F E + +E +
Sbjct: 234 QHMIDGRRCDVKVPDGRDKQGRPSISRIFVGRLTDKVDEHQLRKVFGDEAKSYIETAVVT 293
Query: 634 DK-TKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRATPKPD 494
D +GF F+T S + ++ T+ G V + A P+ +
Sbjct: 294 DVFIPKPFRGFAFVTLSSAEAAERIVSKGSLTVNGLSVGLSIAQPREE 341
>U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform a protein.
Length = 584
Score = 39.9 bits (89), Expect = 0.002
Identities = 17/63 (26%), Positives = 32/63 (50%)
Frame = -2
Query: 778 NNKKVDPKKXKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCF 599
N+ P + K+FVG + + ++ + R F ++G++ + DK+ KG CF
Sbjct: 41 NDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCF 100
Query: 598 ITF 590
+TF
Sbjct: 101 VTF 103
Score = 37.5 bits (83), Expect = 0.011
Identities = 20/66 (30%), Positives = 35/66 (53%)
Frame = -2
Query: 787 HTINNKKVDPKKXKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKG 608
H + K D + R K+F+G LS + +++ +R F++FG I + + D+ R G
Sbjct: 127 HPVQMKPADTENRNER--KLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGKSR-G 183
Query: 607 FCFITF 590
F+TF
Sbjct: 184 CAFVTF 189
>U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type
ribonucleoprotein protein.
Length = 584
Score = 39.9 bits (89), Expect = 0.002
Identities = 17/63 (26%), Positives = 32/63 (50%)
Frame = -2
Query: 778 NNKKVDPKKXKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCF 599
N+ P + K+FVG + + ++ + R F ++G++ + DK+ KG CF
Sbjct: 41 NDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCF 100
Query: 598 ITF 590
+TF
Sbjct: 101 VTF 103
Score = 37.5 bits (83), Expect = 0.011
Identities = 20/66 (30%), Positives = 35/66 (53%)
Frame = -2
Query: 787 HTINNKKVDPKKXKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKG 608
H + K D + R K+F+G LS + +++ +R F++FG I + + D+ R G
Sbjct: 127 HPVQMKPADTENRNER--KLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGKSR-G 183
Query: 607 FCFITF 590
F+TF
Sbjct: 184 CAFVTF 189
>EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA
binding protein variantE protein.
Length = 513
Score = 39.9 bits (89), Expect = 0.002
Identities = 17/63 (26%), Positives = 32/63 (50%)
Frame = -2
Query: 778 NNKKVDPKKXKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCF 599
N+ P + K+FVG + + ++ + R F ++G++ + DK+ KG CF
Sbjct: 41 NDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCF 100
Query: 598 ITF 590
+TF
Sbjct: 101 VTF 103
Score = 37.5 bits (83), Expect = 0.011
Identities = 20/66 (30%), Positives = 35/66 (53%)
Frame = -2
Query: 787 HTINNKKVDPKKXKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKG 608
H + K D + R K+F+G LS + +++ +R F++FG I + + D+ R G
Sbjct: 127 HPVQMKPADTENRNER--KLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGKSR-G 183
Query: 607 FCFITF 590
F+TF
Sbjct: 184 CAFVTF 189
>EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA
binding protein variantD protein.
Length = 327
Score = 39.9 bits (89), Expect = 0.002
Identities = 17/63 (26%), Positives = 32/63 (50%)
Frame = -2
Query: 778 NNKKVDPKKXKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCF 599
N+ P + K+FVG + + ++ + R F ++G++ + DK+ KG CF
Sbjct: 41 NDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCF 100
Query: 598 ITF 590
+TF
Sbjct: 101 VTF 103
Score = 37.5 bits (83), Expect = 0.011
Identities = 20/66 (30%), Positives = 35/66 (53%)
Frame = -2
Query: 787 HTINNKKVDPKKXKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKG 608
H + K D + R K+F+G LS + +++ +R F++FG I + + D+ R G
Sbjct: 127 HPVQMKPADTENRNER--KLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGKSR-G 183
Query: 607 FCFITF 590
F+TF
Sbjct: 184 CAFVTF 189
>EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA
binding protein variantC protein.
Length = 378
Score = 39.9 bits (89), Expect = 0.002
Identities = 17/63 (26%), Positives = 32/63 (50%)
Frame = -2
Query: 778 NNKKVDPKKXKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCF 599
N+ P + K+FVG + + ++ + R F ++G++ + DK+ KG CF
Sbjct: 41 NDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCF 100
Query: 598 ITF 590
+TF
Sbjct: 101 VTF 103
Score = 37.5 bits (83), Expect = 0.011
Identities = 20/66 (30%), Positives = 35/66 (53%)
Frame = -2
Query: 787 HTINNKKVDPKKXKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKG 608
H + K D + R K+F+G LS + +++ +R F++FG I + + D+ R G
Sbjct: 127 HPVQMKPADTENRNER--KLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGKSR-G 183
Query: 607 FCFITF 590
F+TF
Sbjct: 184 CAFVTF 189
>EF523767-1|ABS18833.1| 193|Caenorhabditis elegans ELAV-type RNA
binding protein variantB protein.
Length = 193
Score = 39.9 bits (89), Expect = 0.002
Identities = 17/63 (26%), Positives = 32/63 (50%)
Frame = -2
Query: 778 NNKKVDPKKXKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCF 599
N+ P + K+FVG + + ++ + R F ++G++ + DK+ KG CF
Sbjct: 41 NDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCF 100
Query: 598 ITF 590
+TF
Sbjct: 101 VTF 103
Score = 32.3 bits (70), Expect = 0.41
Identities = 16/58 (27%), Positives = 30/58 (51%)
Frame = -2
Query: 787 HTINNKKVDPKKXKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQR 614
H + K D + R K+F+G LS + +++ +R F++FG I + + D+ R
Sbjct: 127 HPVQMKPADTENRNER--KLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGKSR 182
>EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA
binding protein variantA protein.
Length = 584
Score = 39.9 bits (89), Expect = 0.002
Identities = 17/63 (26%), Positives = 32/63 (50%)
Frame = -2
Query: 778 NNKKVDPKKXKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCF 599
N+ P + K+FVG + + ++ + R F ++G++ + DK+ KG CF
Sbjct: 41 NDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCF 100
Query: 598 ITF 590
+TF
Sbjct: 101 VTF 103
Score = 37.5 bits (83), Expect = 0.011
Identities = 20/66 (30%), Positives = 35/66 (53%)
Frame = -2
Query: 787 HTINNKKVDPKKXKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKG 608
H + K D + R K+F+G LS + +++ +R F++FG I + + D+ R G
Sbjct: 127 HPVQMKPADTENRNER--KLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGKSR-G 183
Query: 607 FCFITF 590
F+TF
Sbjct: 184 CAFVTF 189
>Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical
protein R09B3.3 protein.
Length = 85
Score = 39.5 bits (88), Expect = 0.003
Identities = 14/50 (28%), Positives = 29/50 (58%)
Frame = -2
Query: 730 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESE 581
++VG + ++D++ N+FS+ G + V + D+ + +GF F+ F E
Sbjct: 6 VYVGNAPFQTTEDDLGNYFSQAGNVSNVRIVCDRETGRPRGFAFVEFTEE 55
>Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical
protein C17D12.2 protein.
Length = 514
Score = 39.1 bits (87), Expect = 0.004
Identities = 16/48 (33%), Positives = 27/48 (56%)
Frame = -2
Query: 733 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF 590
K+FVG + + + ++R+ F +FG I E + DK KG F+T+
Sbjct: 30 KLFVGQIPRNLEEKDLRHLFEQFGKIYEFTILKDKYTGMHKGCAFLTY 77
Score = 35.9 bits (79), Expect = 0.033
Identities = 19/56 (33%), Positives = 30/56 (53%)
Frame = -2
Query: 754 KXKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFE 587
K K K+F+G LS + S+DE+R F+ FG + EV + KG F+ ++
Sbjct: 118 KDKMDDKKLFIGMLSKQQSEDEVRALFATFGELDEVTV-LRGADGASKGCAFVKYK 172
>AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative
RNA-binding protein protein.
Length = 514
Score = 39.1 bits (87), Expect = 0.004
Identities = 16/48 (33%), Positives = 27/48 (56%)
Frame = -2
Query: 733 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF 590
K+FVG + + + ++R+ F +FG I E + DK KG F+T+
Sbjct: 30 KLFVGQIPRNLEEKDLRHLFEQFGKIYEFTILKDKYTGMHKGCAFLTY 77
Score = 35.9 bits (79), Expect = 0.033
Identities = 19/56 (33%), Positives = 30/56 (53%)
Frame = -2
Query: 754 KXKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFE 587
K K K+F+G LS + S+DE+R F+ FG + EV + KG F+ ++
Sbjct: 118 KDKMDDKKLFIGMLSKQQSEDEVRALFATFGELDEVTV-LRGADGASKGCAFVKYK 172
>Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical
protein R06C1.4 protein.
Length = 84
Score = 38.7 bits (86), Expect = 0.005
Identities = 14/50 (28%), Positives = 30/50 (60%)
Frame = -2
Query: 730 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESE 581
++VG + + +++EI N+F+ G + V + +D+ + +GF F+ F E
Sbjct: 8 VYVGNVPYQGTEEEIGNYFAAVGHVNNVRIVYDRETGRPRGFAFVEFSEE 57
>Z81037-3|CAB02750.1| 205|Caenorhabditis elegans Hypothetical
protein C17E4.5 protein.
Length = 205
Score = 38.3 bits (85), Expect = 0.006
Identities = 20/88 (22%), Positives = 42/88 (47%), Gaps = 1/88 (1%)
Frame = -2
Query: 757 KKXKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQ 578
+K +A ++VG + + +EI F G++ V + D+ KGF ++ F ++
Sbjct: 71 EKAEADAKSVYVGNVDYGATAEEIEQHFHGCGSVSRVTIQCDRFSGHPKGFAYVEFTEKE 130
Query: 577 VVNDLLKTPKRTIGGKEVDV-KRATPKP 497
+ + L + G+++ V + T KP
Sbjct: 131 GMQNALAMTDSLLRGRQIKVDPKRTNKP 158
>Z78419-2|CAB01702.1| 154|Caenorhabditis elegans Hypothetical
protein F26A3.2 protein.
Length = 154
Score = 36.7 bits (81), Expect = 0.019
Identities = 15/51 (29%), Positives = 26/51 (50%)
Frame = -2
Query: 730 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQ 578
++VG LS +D++ F G + V M D+ K GFCF+ + + +
Sbjct: 39 LYVGNLSYYTKEDQVYELFGRAGDVRRVIMGLDRFKKTPCGFCFVEYYTRE 89
>AC006833-6|AAF60950.1| 491|Caenorhabditis elegans Hypothetical
protein ZK616.1 protein.
Length = 491
Score = 36.7 bits (81), Expect = 0.019
Identities = 17/59 (28%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Frame = -2
Query: 733 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPF-DKTKNQRKGFCFITFESEQVVNDLL 560
+++VGG S+ +S ++IRN ++ EV + + + +GF F+ S N LL
Sbjct: 10 RLYVGGFSTNLSSEQIRNLITQLAAPFEVSIDIVENGSRKHRGFAFVQCRSLAEANVLL 68
>Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical
protein C18D11.4 protein.
Length = 309
Score = 36.3 bits (80), Expect = 0.025
Identities = 16/45 (35%), Positives = 27/45 (60%)
Frame = -2
Query: 724 VGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF 590
V LSS ++ ++R+ F EFG I + ++ +D+ +GF FI F
Sbjct: 80 VFNLSSYTTEKDLRDVFGEFGEINKCDLVYDRPSGNSRGFGFIYF 124
>Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical
protein W02B12.3c protein.
Length = 150
Score = 35.9 bits (79), Expect = 0.033
Identities = 20/79 (25%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Frame = -2
Query: 733 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 554
+I++G L+S +S+ +I +FF +G I +V + + GF F+ F+ ++ D +
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQIRDVLL--------KNGFGFVEFDDKRDAEDAVHD 55
Query: 553 PK-RTIGGKEVDVKRATPK 500
+ +GG+ V + + P+
Sbjct: 56 LNGKELGGERVILDYSKPR 74
>Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical
protein W02B12.3b protein.
Length = 148
Score = 35.9 bits (79), Expect = 0.033
Identities = 20/79 (25%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Frame = -2
Query: 733 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 554
+I++G L+S +S+ +I +FF +G I +V + + GF F+ F+ ++ D +
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQIRDVLL--------KNGFGFVEFDDKRDAEDAVHD 55
Query: 553 PK-RTIGGKEVDVKRATPK 500
+ +GG+ V + + P+
Sbjct: 56 LNGKELGGERVILDYSKPR 74
>Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical
protein W02B12.3a protein.
Length = 312
Score = 35.9 bits (79), Expect = 0.033
Identities = 20/79 (25%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Frame = -2
Query: 733 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 554
+I++G L+S +S+ +I +FF +G I +V + + GF F+ F+ ++ D +
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQIRDVLL--------KNGFGFVEFDDKRDAEDAVHD 55
Query: 553 PK-RTIGGKEVDVKRATPK 500
+ +GG+ V + + P+
Sbjct: 56 LNGKELGGERVILDYSKPR 74
>U23450-1|AAK31467.2| 422|Caenorhabditis elegans Cpeb polya binding
family protein 2 protein.
Length = 422
Score = 35.9 bits (79), Expect = 0.033
Identities = 16/32 (50%), Positives = 23/32 (71%)
Frame = -2
Query: 733 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMP 638
K+FVGGL S + + +I NFFS +G L+V+ P
Sbjct: 89 KVFVGGLPSCVKESDILNFFSRYGR-LQVDWP 119
>U23172-15|AAN63408.1| 374|Caenorhabditis elegans Hypothetical
protein F25B5.7d protein.
Length = 374
Score = 35.1 bits (77), Expect = 0.058
Identities = 24/85 (28%), Positives = 39/85 (45%), Gaps = 1/85 (1%)
Frame = -2
Query: 760 PKKXKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESE 581
PKK ++FVG L +E+ + E++ FS G I E + KGF F+ ++
Sbjct: 108 PKKKFTGRCRLFVGNLPNEVKETELKELFSPHGDIAECYL-------SGKGFAFLRLDTR 160
Query: 580 QVVNDLLKT-PKRTIGGKEVDVKRA 509
+ R I G++V V+ A
Sbjct: 161 AHAESAKEAIDGRIIHGRQVRVRFA 185
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 35.1 bits (77), Expect = 0.058
Identities = 24/85 (28%), Positives = 39/85 (45%), Gaps = 1/85 (1%)
Frame = -2
Query: 760 PKKXKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESE 581
PKK ++FVG L +E+ + E++ FS G I E + KGF F+ ++
Sbjct: 108 PKKKFTGRCRLFVGNLPNEVKETELKELFSPHGDIAECYL-------SGKGFAFLRLDTR 160
Query: 580 QVVNDLLKT-PKRTIGGKEVDVKRA 509
+ R I G++V V+ A
Sbjct: 161 AHAESAKEAIDGRIIHGRQVRVRFA 185
>U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor
U2AF65 protein.
Length = 496
Score = 34.7 bits (76), Expect = 0.077
Identities = 14/48 (29%), Positives = 26/48 (54%)
Frame = -2
Query: 733 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF 590
KIF+GGL + +++D+++ FG + + D N KG+ F +
Sbjct: 292 KIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNS-KGYAFAEY 338
>AF067616-7|AAM98029.1| 423|Caenorhabditis elegans Hypothetical
protein F29C4.7b protein.
Length = 423
Score = 34.7 bits (76), Expect = 0.077
Identities = 22/75 (29%), Positives = 40/75 (53%), Gaps = 4/75 (5%)
Frame = -2
Query: 730 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTK-NQRKGFCFITFES-EQVVNDLLK 557
+FVG + S++ + EIR+ F E G + EV++ KT N + F+ F++ +Q + +
Sbjct: 171 LFVGNMPSDVKEREIRHVFEEHGKVEEVDI---KTPINTDAAYAFVMFQTVDQAIQAKAE 227
Query: 556 TPKRTI--GGKEVDV 518
R I GG + +
Sbjct: 228 EQDRPIRAGGSRMKI 242
>AF067616-6|AAC19192.1| 520|Caenorhabditis elegans Hypothetical
protein F29C4.7a protein.
Length = 520
Score = 34.7 bits (76), Expect = 0.077
Identities = 22/75 (29%), Positives = 40/75 (53%), Gaps = 4/75 (5%)
Frame = -2
Query: 730 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTK-NQRKGFCFITFES-EQVVNDLLK 557
+FVG + S++ + EIR+ F E G + EV++ KT N + F+ F++ +Q + +
Sbjct: 171 LFVGNMPSDVKEREIRHVFEEHGKVEEVDI---KTPINTDAAYAFVMFQTVDQAIQAKAE 227
Query: 556 TPKRTI--GGKEVDV 518
R I GG + +
Sbjct: 228 EQDRPIRAGGSRMKI 242
>AF067616-5|AAU05574.1| 497|Caenorhabditis elegans Hypothetical
protein F29C4.7c protein.
Length = 497
Score = 34.7 bits (76), Expect = 0.077
Identities = 22/75 (29%), Positives = 40/75 (53%), Gaps = 4/75 (5%)
Frame = -2
Query: 730 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTK-NQRKGFCFITFES-EQVVNDLLK 557
+FVG + S++ + EIR+ F E G + EV++ KT N + F+ F++ +Q + +
Sbjct: 148 LFVGNMPSDVKEREIRHVFEEHGKVEEVDI---KTPINTDAAYAFVMFQTVDQAIQAKAE 204
Query: 556 TPKRTI--GGKEVDV 518
R I GG + +
Sbjct: 205 EQDRPIRAGGSRMKI 219
>AF003141-14|AAM48549.1| 362|Caenorhabditis elegans Hypothetical
protein W02D3.11b protein.
Length = 362
Score = 34.7 bits (76), Expect = 0.077
Identities = 21/74 (28%), Positives = 38/74 (51%)
Frame = -2
Query: 718 GLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTI 539
GL E ++ E+R+FF G I +E+P + + G + F +E+ N+ LK + +
Sbjct: 11 GLPWEATEQELRDFFGNNG-IESLEIP--RRNGRTSGDAKVVFTNEEDYNNALKKDREHL 67
Query: 538 GGKEVDVKRATPKP 497
G + ++V A P
Sbjct: 68 GSRYIEVFPAGGAP 81
>AF003141-13|AAK21490.1| 549|Caenorhabditis elegans Hypothetical
protein W02D3.11a protein.
Length = 549
Score = 34.7 bits (76), Expect = 0.077
Identities = 21/74 (28%), Positives = 38/74 (51%)
Frame = -2
Query: 718 GLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTI 539
GL E ++ E+R+FF G I +E+P + + G + F +E+ N+ LK + +
Sbjct: 11 GLPWEATEQELRDFFGNNG-IESLEIP--RRNGRTSGDAKVVFTNEEDYNNALKKDREHL 67
Query: 538 GGKEVDVKRATPKP 497
G + ++V A P
Sbjct: 68 GSRYIEVFPAGGAP 81
>AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing
factor protein 1,isoform a protein.
Length = 496
Score = 34.7 bits (76), Expect = 0.077
Identities = 14/48 (29%), Positives = 26/48 (54%)
Frame = -2
Query: 733 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF 590
KIF+GGL + +++D+++ FG + + D N KG+ F +
Sbjct: 292 KIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNS-KGYAFAEY 338
>AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing
factor protein 1,isoform d protein.
Length = 471
Score = 34.7 bits (76), Expect = 0.077
Identities = 14/48 (29%), Positives = 26/48 (54%)
Frame = -2
Query: 733 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF 590
KIF+GGL + +++D+++ FG + + D N KG+ F +
Sbjct: 267 KIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNS-KGYAFAEY 313
>AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing
factor protein 1,isoform c protein.
Length = 474
Score = 34.7 bits (76), Expect = 0.077
Identities = 14/48 (29%), Positives = 26/48 (54%)
Frame = -2
Query: 733 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF 590
KIF+GGL + +++D+++ FG + + D N KG+ F +
Sbjct: 270 KIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNS-KGYAFAEY 316
>U41007-10|AAL32214.1| 118|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform c protein.
Length = 118
Score = 33.1 bits (72), Expect = 0.24
Identities = 16/59 (27%), Positives = 30/59 (50%)
Frame = -2
Query: 733 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLK 557
K++VGGL S+ + E+ F FG I +V + + GF F+ ++ + D ++
Sbjct: 4 KVYVGGLPSDATSQELEEIFDRFGRIRKVWV-----ARRPPGFAFVEYDDVRDAEDAVR 57
>U41007-9|AAL32213.1| 153|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform b protein.
Length = 153
Score = 33.1 bits (72), Expect = 0.24
Identities = 16/59 (27%), Positives = 30/59 (50%)
Frame = -2
Query: 733 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLK 557
K++VGGL S+ + E+ F FG I +V + + GF F+ ++ + D ++
Sbjct: 4 KVYVGGLPSDATSQELEEIFDRFGRIRKVWV-----ARRPPGFAFVEYDDVRDAEDAVR 57
>U41007-8|AAA82270.1| 179|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform a protein.
Length = 179
Score = 33.1 bits (72), Expect = 0.24
Identities = 16/59 (27%), Positives = 30/59 (50%)
Frame = -2
Query: 733 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLK 557
K++VGGL S+ + E+ F FG I +V + + GF F+ ++ + D ++
Sbjct: 4 KVYVGGLPSDATSQELEEIFDRFGRIRKVWV-----ARRPPGFAFVEYDDVRDAEDAVR 57
>Z75552-9|CAA99945.2| 705|Caenorhabditis elegans Hypothetical
protein W04D2.6a protein.
Length = 705
Score = 32.7 bits (71), Expect = 0.31
Identities = 26/94 (27%), Positives = 42/94 (44%), Gaps = 1/94 (1%)
Frame = -2
Query: 793 GEHTINNKKVDPKKXKARHGKIFVGGLSSEISDDEIRNFFSEFGTILE-VEMPFDKTKNQ 617
G+HT + K + +FVG +S + SD+ IR +E G + + K Q
Sbjct: 31 GQHTPAQQSSQQKPDSS---PVFVGNISDKCSDEFIRKILNECGNVASWKRIKGSNGKLQ 87
Query: 616 RKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVK 515
GFC T + E + L + +G K++ VK
Sbjct: 88 GFGFCHFT-DLEGTLRALRILHEFHLGDKKLTVK 120
>Z75551-6|CAA99937.2| 705|Caenorhabditis elegans Hypothetical
protein W04D2.6a protein.
Length = 705
Score = 32.7 bits (71), Expect = 0.31
Identities = 26/94 (27%), Positives = 42/94 (44%), Gaps = 1/94 (1%)
Frame = -2
Query: 793 GEHTINNKKVDPKKXKARHGKIFVGGLSSEISDDEIRNFFSEFGTILE-VEMPFDKTKNQ 617
G+HT + K + +FVG +S + SD+ IR +E G + + K Q
Sbjct: 31 GQHTPAQQSSQQKPDSS---PVFVGNISDKCSDEFIRKILNECGNVASWKRIKGSNGKLQ 87
Query: 616 RKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVK 515
GFC T + E + L + +G K++ VK
Sbjct: 88 GFGFCHFT-DLEGTLRALRILHEFHLGDKKLTVK 120
>U23172-14|AAL02495.1| 165|Caenorhabditis elegans Hypothetical
protein F25B5.7b protein.
Length = 165
Score = 32.7 bits (71), Expect = 0.31
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = -2
Query: 760 PKKXKARHGKIFVGGLSSEISDDEIRNFFSEFGTILE 650
PKK ++FVG L +E+ + E++ FS G I E
Sbjct: 108 PKKKFTGRCRLFVGNLPNEVKETELKELFSPHGDIAE 144
>AC024826-10|AAM97977.1| 435|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3c protein.
Length = 435
Score = 32.3 bits (70), Expect = 0.41
Identities = 17/88 (19%), Positives = 39/88 (44%)
Frame = -2
Query: 775 NKKVDPKKXKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFI 596
N K++ + + + ++ + ++ FFS G + +V + D + KG C++
Sbjct: 12 NAKLELTAEERDQRTLLIMQIARDTRPRDLEEFFSAVGAVRDVRIITDSRTGRSKGICYV 71
Query: 595 TFESEQVVNDLLKTPKRTIGGKEVDVKR 512
F E+ V L + + G + ++R
Sbjct: 72 EFWDEESVPLGLALNGQRLMGAPLQIQR 99
>AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3a protein.
Length = 580
Score = 32.3 bits (70), Expect = 0.41
Identities = 17/88 (19%), Positives = 39/88 (44%)
Frame = -2
Query: 775 NKKVDPKKXKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFI 596
N K++ + + + ++ + ++ FFS G + +V + D + KG C++
Sbjct: 157 NAKLELTAEERDQRTLLIMQIARDTRPRDLEEFFSAVGAVRDVRIITDSRTGRSKGICYV 216
Query: 595 TFESEQVVNDLLKTPKRTIGGKEVDVKR 512
F E+ V L + + G + ++R
Sbjct: 217 EFWDEESVPLGLALNGQRLMGAPLQIQR 244
>Z81120-1|CAB03342.1| 207|Caenorhabditis elegans Hypothetical
protein T12D8.2 protein.
Length = 207
Score = 31.5 bits (68), Expect = 0.72
Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 7/82 (8%)
Frame = -2
Query: 733 KIFVGGLSSEISDDEIRN------FFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVV 572
K F+GGL + +I F E ++ + D+ KGF ++TFE+EQ +
Sbjct: 7 KAFIGGLPYDSIATDIETILKHCKFTDEELKKFDIHLVHDRDSGSFKGFAYVTFENEQQM 66
Query: 571 NDLLK-TPKRTIGGKEVDVKRA 509
N + G + + V RA
Sbjct: 67 NTAISGLNGADFGNRVLKVNRA 88
>Z66521-8|CAA91394.1| 281|Caenorhabditis elegans Hypothetical
protein W02B12.2 protein.
Length = 281
Score = 31.1 bits (67), Expect = 0.95
Identities = 17/70 (24%), Positives = 37/70 (52%)
Frame = -2
Query: 733 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 554
++++G L + SD ++ +FF +G + +V M + GF F+ F+ ++ +D +
Sbjct: 3 RVYIGRLPNRASDRDVEHFFRGYGKLSDVIM--------KNGFGFVDFQDQRDADDAV-- 52
Query: 553 PKRTIGGKEV 524
+ GKE+
Sbjct: 53 --HDLNGKEL 60
>Z35663-4|CAA84724.1| 307|Caenorhabditis elegans Hypothetical
protein T04A8.6 protein.
Length = 307
Score = 30.3 bits (65), Expect = 1.7
Identities = 9/41 (21%), Positives = 24/41 (58%)
Frame = -2
Query: 697 DDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQV 575
+ E+ +F +FG +L + + ++ KG+ ++ F+++ V
Sbjct: 45 EKELLGYFRQFGNVLRIRVARNRRTGNHKGWAYVGFDNKAV 85
>U28944-8|AAK68193.1| 103|Caenorhabditis elegans Hypothetical
protein C18A3.5c protein.
Length = 103
Score = 30.3 bits (65), Expect = 1.7
Identities = 10/34 (29%), Positives = 23/34 (67%)
Frame = -2
Query: 730 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDK 629
++VG L S +++D I F++ G++ + ++ FD+
Sbjct: 48 LYVGNLDSTVTEDFIATLFNQIGSVTKTKVIFDE 81
>Z19154-9|CAA79552.2| 559|Caenorhabditis elegans Hypothetical
protein C40H1.1 protein.
Length = 559
Score = 29.9 bits (64), Expect = 2.2
Identities = 10/27 (37%), Positives = 19/27 (70%)
Frame = -2
Query: 733 KIFVGGLSSEISDDEIRNFFSEFGTIL 653
K+F+GGL ++S++++ F FG +L
Sbjct: 246 KVFIGGLPIDVSEEQVWATFGAFGKVL 272
>L07144-9|AAK21441.1| 737|Caenorhabditis elegans Hypothetical
protein R05D3.2 protein.
Length = 737
Score = 29.9 bits (64), Expect = 2.2
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = +3
Query: 546 LLGVLSKSFTTCSDSNVMKQKPFLWFFVLSKGISTSKI 659
L+G L S+ ++ PF +FF+ S+G STSKI
Sbjct: 156 LIGALWNYVFVLSNVSLFVLLPFSYFFIESQGFSTSKI 193
>Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 29.5 bits (63), Expect = 2.9
Identities = 14/49 (28%), Positives = 25/49 (51%)
Frame = -2
Query: 730 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFES 584
+FV L+ +D+++ FS FG I E+ D+ + FI F++
Sbjct: 243 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDN 291
>Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 29.5 bits (63), Expect = 2.9
Identities = 14/49 (28%), Positives = 25/49 (51%)
Frame = -2
Query: 730 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFES 584
+FV L+ +D+++ FS FG I E+ D+ + FI F++
Sbjct: 243 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDN 291
>Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical
protein F39H2.2b protein.
Length = 358
Score = 29.5 bits (63), Expect = 2.9
Identities = 14/49 (28%), Positives = 25/49 (51%)
Frame = -2
Query: 730 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFES 584
+FV L+ +D+++ FS FG I E+ D+ + FI F++
Sbjct: 174 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDN 222
>AF003145-3|AAB57717.1| 751|Caenorhabditis elegans Cpeb polya
binding family protein 3 protein.
Length = 751
Score = 29.5 bits (63), Expect = 2.9
Identities = 14/32 (43%), Positives = 22/32 (68%)
Frame = -2
Query: 733 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMP 638
KIFVGG+ +I++ +++ F EFG+ VE P
Sbjct: 296 KIFVGGVPWDITEAALKDSFGEFGS-CAVEWP 326
>AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical
protein F58D5.1 protein.
Length = 611
Score = 29.1 bits (62), Expect = 3.8
Identities = 18/79 (22%), Positives = 33/79 (41%), Gaps = 4/79 (5%)
Frame = -2
Query: 787 HTINNKKVDPKKXKARHGKIFVGGLSSEISDDEIRNFFSEFGT----ILEVEMPFDKTKN 620
H I+ K + ++F+G + S DEI ++ +P D K
Sbjct: 264 HEISTGKPLKVNVSIANTRLFIGNIPKTKSKDEILEELKTHAEGVVDVIVYSVP-DNEKI 322
Query: 619 QRKGFCFITFESEQVVNDL 563
+ +GFCF+ F + +D+
Sbjct: 323 KNRGFCFVDFIDHKTASDI 341
>AF003140-8|AAB54169.1| 396|Caenorhabditis elegans Hypothetical
protein C44E4.4 protein.
Length = 396
Score = 28.7 bits (61), Expect = 5.1
Identities = 16/58 (27%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Frame = -2
Query: 748 KARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQR-KGFCFITFESEQ 578
K +H +++ G S++ D+I + ++FG V M K ++ KG FIT+++ +
Sbjct: 106 KIKHRTVYMKGFSTDTQLDDIIQWANQFGETENVLMRRLKPGDRTFKGSVFITYKTRE 163
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,973,593
Number of Sequences: 27780
Number of extensions: 190755
Number of successful extensions: 700
Number of sequences better than 10.0: 96
Number of HSP's better than 10.0 without gapping: 650
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 696
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1935274832
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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