Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P17_pT_D24
(780 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X64044-1|CAA45409.1| 475|Homo sapiens splicing factor U2AF prot... 143 6e-34
BC030574-1|AAH30574.1| 471|Homo sapiens U2 small nuclear RNA au... 143 6e-34
BC008740-1|AAH08740.1| 471|Homo sapiens U2 small nuclear RNA au... 143 6e-34
BC014917-1|AAH14917.1| 314|Homo sapiens UHMK1 protein protein. 56 2e-07
AL359699-2|CAH70392.1| 419|Homo sapiens U2AF homology motif (UH... 56 2e-07
AJ536197-1|CAD60192.1| 419|Homo sapiens KIS protein protein. 56 2e-07
U51586-1|AAB41656.1| 541|Homo sapiens siah binding protein 1 pr... 44 6e-04
CR457143-1|CAG33424.1| 559|Homo sapiens SIAHBP1 protein. 44 6e-04
BC011979-1|AAH11979.1| 516|Homo sapiens SIAHBP1 protein protein. 44 6e-04
BC011265-1|AAH11265.1| 516|Homo sapiens SIAHBP1 protein protein. 44 6e-04
BC009734-1|AAH09734.1| 499|Homo sapiens SIAHBP1 protein protein. 44 6e-04
BC008875-1|AAH08875.1| 542|Homo sapiens fuse-binding protein-in... 44 6e-04
AF217197-1|AAF27522.2| 542|Homo sapiens FBP-interacting repress... 44 6e-04
AF190744-1|AAF05605.1| 556|Homo sapiens poly-U binding splicing... 44 6e-04
AF114818-1|AAF23589.1| 559|Homo sapiens Ro ribonucleoprotein-bi... 44 6e-04
BC039322-1|AAH39322.1| 401|Homo sapiens RBM17 protein protein. 38 0.041
BC009064-1|AAH09064.1| 369|Homo sapiens RBM17 protein protein. 38 0.041
BC007871-1|AAH07871.1| 401|Homo sapiens RNA binding motif prote... 38 0.041
AL157395-8|CAH73602.1| 401|Homo sapiens RNA binding motif prote... 38 0.041
AF542550-1|AAQ09533.1| 401|Homo sapiens unknown protein. 38 0.041
X84157-1|CAA58962.1| 156|Homo sapiens subunit of the dimeric ca... 32 2.7
BT006842-1|AAP35488.1| 156|Homo sapiens nuclear cap binding pro... 32 2.7
BC001255-1|AAH01255.1| 156|Homo sapiens nuclear cap binding pro... 32 2.7
AY644767-1|AAV85455.1| 156|Homo sapiens cell proliferation-indu... 32 2.7
L10911-1|AAA16347.1| 530|Homo sapiens splicing factor protein. 31 6.1
L10910-1|AAA16346.1| 524|Homo sapiens splicing factor protein. 31 6.1
D59253-1|BAA09599.1| 156|Homo sapiens NCBP interacting protein ... 31 6.1
BX537770-1|CAD97833.1| 373|Homo sapiens hypothetical protein pr... 31 6.1
BC141835-1|AAI41836.1| 530|Homo sapiens RNA binding motif prote... 31 6.1
BC131543-1|AAI31544.1| 508|Homo sapiens RBM39 protein protein. 31 6.1
AL357374-9|CAC11119.1| 524|Homo sapiens RNA binding motif prote... 31 6.1
AL357374-8|CAC11118.1| 530|Homo sapiens RNA binding motif prote... 31 6.1
>X64044-1|CAA45409.1| 475|Homo sapiens splicing factor U2AF
protein.
Length = 475
Score = 143 bits (347), Expect = 6e-34
Identities = 65/103 (63%), Positives = 75/103 (72%)
Frame = -2
Query: 773 GPPXEVLCLLNMVTPXXXXXXXXXXXXXXXXXXECNKYGVVRSIEIPRPIEGVEVPGCGK 594
G P EVLCL+NMV P EC+KYG+V+SIEIPRP++GVEVPGCGK
Sbjct: 372 GHPTEVLCLMNMVLPEELLDDEEYEEIVEDVRDECSKYGLVKSIEIPRPVDGVEVPGCGK 431
Query: 593 VFVEFNSIADCQKAQQTLTGRKFSNRVVVTSYFDPDKYHRREF 465
+FVEF S+ DCQKA Q LTGRKF+NRVVVT Y DPD YHRR+F
Sbjct: 432 IFVEFTSVFDCQKAMQGLTGRKFANRVVVTKYCDPDSYHRRDF 474
>BC030574-1|AAH30574.1| 471|Homo sapiens U2 small nuclear RNA
auxiliary factor 2 protein.
Length = 471
Score = 143 bits (347), Expect = 6e-34
Identities = 65/103 (63%), Positives = 75/103 (72%)
Frame = -2
Query: 773 GPPXEVLCLLNMVTPXXXXXXXXXXXXXXXXXXECNKYGVVRSIEIPRPIEGVEVPGCGK 594
G P EVLCL+NMV P EC+KYG+V+SIEIPRP++GVEVPGCGK
Sbjct: 368 GHPTEVLCLMNMVLPEELLDDEEYEEIVEDVRDECSKYGLVKSIEIPRPVDGVEVPGCGK 427
Query: 593 VFVEFNSIADCQKAQQTLTGRKFSNRVVVTSYFDPDKYHRREF 465
+FVEF S+ DCQKA Q LTGRKF+NRVVVT Y DPD YHRR+F
Sbjct: 428 IFVEFTSVFDCQKAMQGLTGRKFANRVVVTKYCDPDSYHRRDF 470
>BC008740-1|AAH08740.1| 471|Homo sapiens U2 small nuclear RNA
auxiliary factor 2 protein.
Length = 471
Score = 143 bits (347), Expect = 6e-34
Identities = 65/103 (63%), Positives = 75/103 (72%)
Frame = -2
Query: 773 GPPXEVLCLLNMVTPXXXXXXXXXXXXXXXXXXECNKYGVVRSIEIPRPIEGVEVPGCGK 594
G P EVLCL+NMV P EC+KYG+V+SIEIPRP++GVEVPGCGK
Sbjct: 368 GHPTEVLCLMNMVLPEELLDDEEYEEIVEDVRDECSKYGLVKSIEIPRPVDGVEVPGCGK 427
Query: 593 VFVEFNSIADCQKAQQTLTGRKFSNRVVVTSYFDPDKYHRREF 465
+FVEF S+ DCQKA Q LTGRKF+NRVVVT Y DPD YHRR+F
Sbjct: 428 IFVEFTSVFDCQKAMQGLTGRKFANRVVVTKYCDPDSYHRRDF 470
>BC014917-1|AAH14917.1| 314|Homo sapiens UHMK1 protein protein.
Length = 314
Score = 55.6 bits (128), Expect = 2e-07
Identities = 34/98 (34%), Positives = 48/98 (48%)
Frame = -2
Query: 767 PXEVLCLLNMVTPXXXXXXXXXXXXXXXXXXECNKYGVVRSIEIPRPIEGVEVPGCGKVF 588
P VL LLN++ EC KYG V S+ +P+ E PG G+VF
Sbjct: 214 PTPVLRLLNVLDDDYLENEEEYEDVVEDVKEECQKYGPVVSLLVPK-----ENPGRGQVF 268
Query: 587 VEFNSIADCQKAQQTLTGRKFSNRVVVTSYFDPDKYHR 474
VE+ + D + AQ+ LTGR F + VV +++ Y R
Sbjct: 269 VEYANAGDSKAAQKLLTGRMFDGKFVVATFYPLSAYKR 306
>AL359699-2|CAH70392.1| 419|Homo sapiens U2AF homology motif (UHM)
kinase 1 protein.
Length = 419
Score = 55.6 bits (128), Expect = 2e-07
Identities = 34/98 (34%), Positives = 48/98 (48%)
Frame = -2
Query: 767 PXEVLCLLNMVTPXXXXXXXXXXXXXXXXXXECNKYGVVRSIEIPRPIEGVEVPGCGKVF 588
P VL LLN++ EC KYG V S+ +P+ E PG G+VF
Sbjct: 319 PTPVLRLLNVLDDDYLENEEEYEDVVEDVKEECQKYGPVVSLLVPK-----ENPGRGQVF 373
Query: 587 VEFNSIADCQKAQQTLTGRKFSNRVVVTSYFDPDKYHR 474
VE+ + D + AQ+ LTGR F + VV +++ Y R
Sbjct: 374 VEYANAGDSKAAQKLLTGRMFDGKFVVATFYPLSAYKR 411
>AJ536197-1|CAD60192.1| 419|Homo sapiens KIS protein protein.
Length = 419
Score = 55.6 bits (128), Expect = 2e-07
Identities = 34/98 (34%), Positives = 48/98 (48%)
Frame = -2
Query: 767 PXEVLCLLNMVTPXXXXXXXXXXXXXXXXXXECNKYGVVRSIEIPRPIEGVEVPGCGKVF 588
P VL LLN++ EC KYG V S+ +P+ E PG G+VF
Sbjct: 319 PTPVLRLLNVLDDDYLENEEEYEDVVEDVKEECQKYGPVVSLLVPK-----ENPGRGQVF 373
Query: 587 VEFNSIADCQKAQQTLTGRKFSNRVVVTSYFDPDKYHR 474
VE+ + D + AQ+ LTGR F + VV +++ Y R
Sbjct: 374 VEYANAGDSKAAQKLLTGRMFDGKFVVATFYPLSAYKR 411
>U51586-1|AAB41656.1| 541|Homo sapiens siah binding protein 1
protein.
Length = 541
Score = 44.0 bits (99), Expect = 6e-04
Identities = 23/66 (34%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Frame = -2
Query: 671 CNKYGVVRSIEIPRPIEGVEVPG--CGKVFVEFNSIADCQKAQQTLTGRKFSNRVVVTSY 498
C K+G V + I + +G E K+FVEF+ ++ KA Q L GR F+ R VV
Sbjct: 469 CGKFGAVNRVIIYQEKQGEEEDAEIIVKIFVEFSIASETHKAIQALNGRWFAGRKVVAEV 528
Query: 497 FDPDKY 480
+D +++
Sbjct: 529 YDQERF 534
>CR457143-1|CAG33424.1| 559|Homo sapiens SIAHBP1 protein.
Length = 559
Score = 44.0 bits (99), Expect = 6e-04
Identities = 23/66 (34%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Frame = -2
Query: 671 CNKYGVVRSIEIPRPIEGVEVPG--CGKVFVEFNSIADCQKAQQTLTGRKFSNRVVVTSY 498
C K+G V + I + +G E K+FVEF+ ++ KA Q L GR F+ R VV
Sbjct: 487 CGKFGAVNRVIIYQEKQGEEEDAEIIVKIFVEFSIASETHKAIQALNGRWFAGRKVVAEV 546
Query: 497 FDPDKY 480
+D +++
Sbjct: 547 YDQERF 552
>BC011979-1|AAH11979.1| 516|Homo sapiens SIAHBP1 protein protein.
Length = 516
Score = 44.0 bits (99), Expect = 6e-04
Identities = 23/66 (34%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Frame = -2
Query: 671 CNKYGVVRSIEIPRPIEGVEVPG--CGKVFVEFNSIADCQKAQQTLTGRKFSNRVVVTSY 498
C K+G V + I + +G E K+FVEF+ ++ KA Q L GR F+ R VV
Sbjct: 444 CGKFGAVNRVIIYQEKQGEEEDAEIIVKIFVEFSIASETHKAIQALNGRWFAGRKVVAEV 503
Query: 497 FDPDKY 480
+D +++
Sbjct: 504 YDQERF 509
>BC011265-1|AAH11265.1| 516|Homo sapiens SIAHBP1 protein protein.
Length = 516
Score = 44.0 bits (99), Expect = 6e-04
Identities = 23/66 (34%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Frame = -2
Query: 671 CNKYGVVRSIEIPRPIEGVEVPG--CGKVFVEFNSIADCQKAQQTLTGRKFSNRVVVTSY 498
C K+G V + I + +G E K+FVEF+ ++ KA Q L GR F+ R VV
Sbjct: 444 CGKFGAVNRVIIYQEKQGEEEDAEIIVKIFVEFSIASETHKAIQALNGRWFAGRKVVAEV 503
Query: 497 FDPDKY 480
+D +++
Sbjct: 504 YDQERF 509
>BC009734-1|AAH09734.1| 499|Homo sapiens SIAHBP1 protein protein.
Length = 499
Score = 44.0 bits (99), Expect = 6e-04
Identities = 23/66 (34%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Frame = -2
Query: 671 CNKYGVVRSIEIPRPIEGVEVPG--CGKVFVEFNSIADCQKAQQTLTGRKFSNRVVVTSY 498
C K+G V + I + +G E K+FVEF+ ++ KA Q L GR F+ R VV
Sbjct: 427 CGKFGAVNRVIIYQEKQGEEEDAEIIVKIFVEFSIASETHKAIQALNGRWFAGRKVVAEV 486
Query: 497 FDPDKY 480
+D +++
Sbjct: 487 YDQERF 492
>BC008875-1|AAH08875.1| 542|Homo sapiens fuse-binding
protein-interacting repressor protein.
Length = 542
Score = 44.0 bits (99), Expect = 6e-04
Identities = 23/66 (34%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Frame = -2
Query: 671 CNKYGVVRSIEIPRPIEGVEVPG--CGKVFVEFNSIADCQKAQQTLTGRKFSNRVVVTSY 498
C K+G V + I + +G E K+FVEF+ ++ KA Q L GR F+ R VV
Sbjct: 470 CGKFGAVNRVIIYQEKQGEEEDAEIIVKIFVEFSIASETHKAIQALNGRWFAGRKVVAEV 529
Query: 497 FDPDKY 480
+D +++
Sbjct: 530 YDQERF 535
>AF217197-1|AAF27522.2| 542|Homo sapiens FBP-interacting repressor
protein.
Length = 542
Score = 44.0 bits (99), Expect = 6e-04
Identities = 23/66 (34%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Frame = -2
Query: 671 CNKYGVVRSIEIPRPIEGVEVPG--CGKVFVEFNSIADCQKAQQTLTGRKFSNRVVVTSY 498
C K+G V + I + +G E K+FVEF+ ++ KA Q L GR F+ R VV
Sbjct: 470 CGKFGAVNRVIIYQEKQGEEEDAEIIVKIFVEFSIASETHKAIQALNGRWFAGRKVVAEV 529
Query: 497 FDPDKY 480
+D +++
Sbjct: 530 YDQERF 535
>AF190744-1|AAF05605.1| 556|Homo sapiens poly-U binding splicing
factor PUF60 protein.
Length = 556
Score = 44.0 bits (99), Expect = 6e-04
Identities = 23/66 (34%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Frame = -2
Query: 671 CNKYGVVRSIEIPRPIEGVEVPG--CGKVFVEFNSIADCQKAQQTLTGRKFSNRVVVTSY 498
C K+G V + I + +G E K+FVEF+ ++ KA Q L GR F+ R VV
Sbjct: 484 CGKFGAVNRVIIYQEKQGEEEDAEIIVKIFVEFSIASETHKAIQALNGRWFAGRKVVAEV 543
Query: 497 FDPDKY 480
+D +++
Sbjct: 544 YDQERF 549
>AF114818-1|AAF23589.1| 559|Homo sapiens Ro
ribonucleoprotein-binding protein 1 protein.
Length = 559
Score = 44.0 bits (99), Expect = 6e-04
Identities = 23/66 (34%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Frame = -2
Query: 671 CNKYGVVRSIEIPRPIEGVEVPG--CGKVFVEFNSIADCQKAQQTLTGRKFSNRVVVTSY 498
C K+G V + I + +G E K+FVEF+ ++ KA Q L GR F+ R VV
Sbjct: 487 CGKFGAVNRVIIYQEKQGEEEDAEIIVKIFVEFSIASETHKAIQALNGRWFAGRKVVAEV 546
Query: 497 FDPDKY 480
+D +++
Sbjct: 547 YDQERF 552
>BC039322-1|AAH39322.1| 401|Homo sapiens RBM17 protein protein.
Length = 401
Score = 37.9 bits (84), Expect = 0.041
Identities = 22/64 (34%), Positives = 30/64 (46%)
Frame = -2
Query: 671 CNKYGVVRSIEIPRPIEGVEVPGCGKVFVEFNSIADCQKAQQTLTGRKFSNRVVVTSYFD 492
C KYG V I I G ++F+EF + KA L GR F RVV +++
Sbjct: 330 CEKYGKVGKCVIFE-IPGAPDDEAVRIFLEFERVESAIKAVVDLNGRYFGGRVVKACFYN 388
Query: 491 PDKY 480
DK+
Sbjct: 389 LDKF 392
>BC009064-1|AAH09064.1| 369|Homo sapiens RBM17 protein protein.
Length = 369
Score = 37.9 bits (84), Expect = 0.041
Identities = 22/64 (34%), Positives = 30/64 (46%)
Frame = -2
Query: 671 CNKYGVVRSIEIPRPIEGVEVPGCGKVFVEFNSIADCQKAQQTLTGRKFSNRVVVTSYFD 492
C KYG V I I G ++F+EF + KA L GR F RVV +++
Sbjct: 298 CEKYGKVGKCVIFE-IPGAPDDEAVRIFLEFERVESAIKAVVDLNGRYFGGRVVKACFYN 356
Query: 491 PDKY 480
DK+
Sbjct: 357 LDKF 360
>BC007871-1|AAH07871.1| 401|Homo sapiens RNA binding motif protein
17 protein.
Length = 401
Score = 37.9 bits (84), Expect = 0.041
Identities = 22/64 (34%), Positives = 30/64 (46%)
Frame = -2
Query: 671 CNKYGVVRSIEIPRPIEGVEVPGCGKVFVEFNSIADCQKAQQTLTGRKFSNRVVVTSYFD 492
C KYG V I I G ++F+EF + KA L GR F RVV +++
Sbjct: 330 CEKYGKVGKCVIFE-IPGAPDDEAVRIFLEFERVESAIKAVVDLNGRYFGGRVVKACFYN 388
Query: 491 PDKY 480
DK+
Sbjct: 389 LDKF 392
>AL157395-8|CAH73602.1| 401|Homo sapiens RNA binding motif protein
17 protein.
Length = 401
Score = 37.9 bits (84), Expect = 0.041
Identities = 22/64 (34%), Positives = 30/64 (46%)
Frame = -2
Query: 671 CNKYGVVRSIEIPRPIEGVEVPGCGKVFVEFNSIADCQKAQQTLTGRKFSNRVVVTSYFD 492
C KYG V I I G ++F+EF + KA L GR F RVV +++
Sbjct: 330 CEKYGKVGKCVIFE-IPGAPDDEAVRIFLEFERVESAIKAVVDLNGRYFGGRVVKACFYN 388
Query: 491 PDKY 480
DK+
Sbjct: 389 LDKF 392
>AF542550-1|AAQ09533.1| 401|Homo sapiens unknown protein.
Length = 401
Score = 37.9 bits (84), Expect = 0.041
Identities = 22/64 (34%), Positives = 30/64 (46%)
Frame = -2
Query: 671 CNKYGVVRSIEIPRPIEGVEVPGCGKVFVEFNSIADCQKAQQTLTGRKFSNRVVVTSYFD 492
C KYG V I I G ++F+EF + KA L GR F RVV +++
Sbjct: 330 CEKYGKVGKCVIFE-IPGAPDDEAVRIFLEFERVESAIKAVVDLNGRYFGGRVVKACFYN 388
Query: 491 PDKY 480
DK+
Sbjct: 389 LDKF 392
>X84157-1|CAA58962.1| 156|Homo sapiens subunit of the dimeric cap
binding complex CBC protein.
Length = 156
Score = 31.9 bits (69), Expect = 2.7
Identities = 12/43 (27%), Positives = 25/43 (58%)
Frame = -2
Query: 626 IEGVEVPGCGKVFVEFNSIADCQKAQQTLTGRKFSNRVVVTSY 498
++ ++ CG FVE+ S AD + A + + G + +R++ T +
Sbjct: 73 LDKMKKTACGFCFVEYYSRADAENAMRYINGTRLDDRIIRTDW 115
>BT006842-1|AAP35488.1| 156|Homo sapiens nuclear cap binding
protein subunit 2, 20kDa protein.
Length = 156
Score = 31.9 bits (69), Expect = 2.7
Identities = 12/43 (27%), Positives = 25/43 (58%)
Frame = -2
Query: 626 IEGVEVPGCGKVFVEFNSIADCQKAQQTLTGRKFSNRVVVTSY 498
++ ++ CG FVE+ S AD + A + + G + +R++ T +
Sbjct: 73 LDKMKKTACGFCFVEYYSRADAENAMRYINGTRLDDRIIRTDW 115
>BC001255-1|AAH01255.1| 156|Homo sapiens nuclear cap binding
protein subunit 2, 20kDa protein.
Length = 156
Score = 31.9 bits (69), Expect = 2.7
Identities = 12/43 (27%), Positives = 25/43 (58%)
Frame = -2
Query: 626 IEGVEVPGCGKVFVEFNSIADCQKAQQTLTGRKFSNRVVVTSY 498
++ ++ CG FVE+ S AD + A + + G + +R++ T +
Sbjct: 73 LDKMKKTACGFCFVEYYSRADAENAMRYINGTRLDDRIIRTDW 115
>AY644767-1|AAV85455.1| 156|Homo sapiens cell
proliferation-inducing gene 55 protein.
Length = 156
Score = 31.9 bits (69), Expect = 2.7
Identities = 12/43 (27%), Positives = 25/43 (58%)
Frame = -2
Query: 626 IEGVEVPGCGKVFVEFNSIADCQKAQQTLTGRKFSNRVVVTSY 498
++ ++ CG FVE+ S AD + A + + G + +R++ T +
Sbjct: 73 LDKMKKTACGFCFVEYYSRADAENAMRYINGTRLDDRIIRTDW 115
>L10911-1|AAA16347.1| 530|Homo sapiens splicing factor protein.
Length = 530
Score = 30.7 bits (66), Expect = 6.1
Identities = 25/91 (27%), Positives = 35/91 (38%)
Frame = -2
Query: 749 LLNMVTPXXXXXXXXXXXXXXXXXXECNKYGVVRSIEIPRPIEGVEVPGCGKVFVEFNSI 570
L NM P ECNK+G V I + + G V+V+ SI
Sbjct: 428 LSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYVDKN------SAQGNVYVKCPSI 481
Query: 569 ADCQKAQQTLTGRKFSNRVVVTSYFDPDKYH 477
A A L GR F+ +++ +Y YH
Sbjct: 482 AAAIAAVNALHGRWFAGKMITAAYVPLPTYH 512
>L10910-1|AAA16346.1| 524|Homo sapiens splicing factor protein.
Length = 524
Score = 30.7 bits (66), Expect = 6.1
Identities = 25/91 (27%), Positives = 35/91 (38%)
Frame = -2
Query: 749 LLNMVTPXXXXXXXXXXXXXXXXXXECNKYGVVRSIEIPRPIEGVEVPGCGKVFVEFNSI 570
L NM P ECNK+G V I + + G V+V+ SI
Sbjct: 422 LSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYVDKN------SAQGNVYVKCPSI 475
Query: 569 ADCQKAQQTLTGRKFSNRVVVTSYFDPDKYH 477
A A L GR F+ +++ +Y YH
Sbjct: 476 AAAIAAVNALHGRWFAGKMITAAYVPLPTYH 506
>D59253-1|BAA09599.1| 156|Homo sapiens NCBP interacting protein 1
protein.
Length = 156
Score = 30.7 bits (66), Expect = 6.1
Identities = 11/43 (25%), Positives = 25/43 (58%)
Frame = -2
Query: 626 IEGVEVPGCGKVFVEFNSIADCQKAQQTLTGRKFSNRVVVTSY 498
++ ++ CG FVE+ S AD + + + + G + +R++ T +
Sbjct: 73 LDKMKKTACGFCFVEYYSRADAENSMRYINGTRLDDRIIRTDW 115
>BX537770-1|CAD97833.1| 373|Homo sapiens hypothetical protein
protein.
Length = 373
Score = 30.7 bits (66), Expect = 6.1
Identities = 25/91 (27%), Positives = 35/91 (38%)
Frame = -2
Query: 749 LLNMVTPXXXXXXXXXXXXXXXXXXECNKYGVVRSIEIPRPIEGVEVPGCGKVFVEFNSI 570
L NM P ECNK+G V I + + G V+V+ SI
Sbjct: 271 LSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYVDKN------SAQGNVYVKCPSI 324
Query: 569 ADCQKAQQTLTGRKFSNRVVVTSYFDPDKYH 477
A A L GR F+ +++ +Y YH
Sbjct: 325 AAAIAAVNALHGRWFAGKMITAAYVPLPTYH 355
>BC141835-1|AAI41836.1| 530|Homo sapiens RNA binding motif protein
39 protein.
Length = 530
Score = 30.7 bits (66), Expect = 6.1
Identities = 25/91 (27%), Positives = 35/91 (38%)
Frame = -2
Query: 749 LLNMVTPXXXXXXXXXXXXXXXXXXECNKYGVVRSIEIPRPIEGVEVPGCGKVFVEFNSI 570
L NM P ECNK+G V I + + G V+V+ SI
Sbjct: 428 LSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYVDKN------SAQGNVYVKCPSI 481
Query: 569 ADCQKAQQTLTGRKFSNRVVVTSYFDPDKYH 477
A A L GR F+ +++ +Y YH
Sbjct: 482 AAAIAAVNALHGRWFAGKMITAAYVPLPTYH 512
>BC131543-1|AAI31544.1| 508|Homo sapiens RBM39 protein protein.
Length = 508
Score = 30.7 bits (66), Expect = 6.1
Identities = 25/91 (27%), Positives = 35/91 (38%)
Frame = -2
Query: 749 LLNMVTPXXXXXXXXXXXXXXXXXXECNKYGVVRSIEIPRPIEGVEVPGCGKVFVEFNSI 570
L NM P ECNK+G V I + + G V+V+ SI
Sbjct: 406 LSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYVDKN------SAQGNVYVKCPSI 459
Query: 569 ADCQKAQQTLTGRKFSNRVVVTSYFDPDKYH 477
A A L GR F+ +++ +Y YH
Sbjct: 460 AAAIAAVNALHGRWFAGKMITAAYVPLPTYH 490
>AL357374-9|CAC11119.1| 524|Homo sapiens RNA binding motif protein
39 protein.
Length = 524
Score = 30.7 bits (66), Expect = 6.1
Identities = 25/91 (27%), Positives = 35/91 (38%)
Frame = -2
Query: 749 LLNMVTPXXXXXXXXXXXXXXXXXXECNKYGVVRSIEIPRPIEGVEVPGCGKVFVEFNSI 570
L NM P ECNK+G V I + + G V+V+ SI
Sbjct: 422 LSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYVDKN------SAQGNVYVKCPSI 475
Query: 569 ADCQKAQQTLTGRKFSNRVVVTSYFDPDKYH 477
A A L GR F+ +++ +Y YH
Sbjct: 476 AAAIAAVNALHGRWFAGKMITAAYVPLPTYH 506
>AL357374-8|CAC11118.1| 530|Homo sapiens RNA binding motif protein
39 protein.
Length = 530
Score = 30.7 bits (66), Expect = 6.1
Identities = 25/91 (27%), Positives = 35/91 (38%)
Frame = -2
Query: 749 LLNMVTPXXXXXXXXXXXXXXXXXXECNKYGVVRSIEIPRPIEGVEVPGCGKVFVEFNSI 570
L NM P ECNK+G V I + + G V+V+ SI
Sbjct: 428 LSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYVDKN------SAQGNVYVKCPSI 481
Query: 569 ADCQKAQQTLTGRKFSNRVVVTSYFDPDKYH 477
A A L GR F+ +++ +Y YH
Sbjct: 482 AAAIAAVNALHGRWFAGKMITAAYVPLPTYH 512
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,532,768
Number of Sequences: 237096
Number of extensions: 1709631
Number of successful extensions: 2832
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 2758
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2825
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9478778060
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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