Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P17_pT_D24
(780 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L23404-1|AAA03548.1| 416|Drosophila melanogaster RNA binding pr... 167 2e-41
AY069320-1|AAL39465.1| 416|Drosophila melanogaster LD03714p pro... 167 2e-41
AE014298-2376|AAF48596.1| 416|Drosophila melanogaster CG9998-PA... 167 2e-41
AY075220-1|AAL68087.1| 449|Drosophila melanogaster AT16577p pro... 106 3e-23
AE013599-3557|AAF46969.1| 449|Drosophila melanogaster CG3162-PA... 106 3e-23
DQ295864-1|ABB99954.1| 403|Drosophila melanogaster RNA binding ... 39 0.007
BT012503-1|AAS93774.1| 363|Drosophila melanogaster AT25717p pro... 39 0.007
BT012461-1|AAS93732.1| 371|Drosophila melanogaster RE44883p pro... 39 0.007
AY071532-1|AAL49154.1| 379|Drosophila melanogaster RE57542p pro... 39 0.007
AE014134-3634|EAA46009.2| 363|Drosophila melanogaster CG17540-P... 39 0.007
AE014134-3633|EAA46010.2| 371|Drosophila melanogaster CG17540-P... 39 0.007
AE014134-3632|EAA46008.1| 403|Drosophila melanogaster CG17540-P... 39 0.007
BT003317-1|AAO25077.1| 545|Drosophila melanogaster GH01086p pro... 33 0.33
AY061006-1|AAL28554.1| 545|Drosophila melanogaster HL02140p pro... 33 0.33
AF479079-1|AAL86452.1| 637|Drosophila melanogaster half pint pr... 33 0.33
AF190745-1|AAF04132.1| 637|Drosophila melanogaster poly-U bindi... 33 0.33
AE014296-262|AAG22222.2| 545|Drosophila melanogaster CG12085-PD... 33 0.33
AE014296-261|AAF47502.1| 545|Drosophila melanogaster CG12085-PC... 33 0.33
AE014296-260|AAG22221.1| 545|Drosophila melanogaster CG12085-PB... 33 0.33
AE014296-259|AAF47501.1| 637|Drosophila melanogaster CG12085-PA... 33 0.33
>L23404-1|AAA03548.1| 416|Drosophila melanogaster RNA binding
protein protein.
Length = 416
Score = 167 bits (405), Expect = 2e-41
Identities = 78/104 (75%), Positives = 82/104 (78%)
Frame = -2
Query: 776 AGPPXEVLCLLNMVTPXXXXXXXXXXXXXXXXXXECNKYGVVRSIEIPRPIEGVEVPGCG 597
+GPP EVLCLLNMVTP EC KYGVVRS+EIPRPIEGVEVPGCG
Sbjct: 313 SGPPTEVLCLLNMVTPDELRDEEEYEDILEDIKEECTKYGVVRSVEIPRPIEGVEVPGCG 372
Query: 596 KVFVEFNSIADCQKAQQTLTGRKFSNRVVVTSYFDPDKYHRREF 465
KVFVEFNS+ DCQKAQQ LTGRKFS+RVVVTSYFDPDKYHRREF
Sbjct: 373 KVFVEFNSVLDCQKAQQALTGRKFSDRVVVTSYFDPDKYHRREF 416
>AY069320-1|AAL39465.1| 416|Drosophila melanogaster LD03714p
protein.
Length = 416
Score = 167 bits (405), Expect = 2e-41
Identities = 78/104 (75%), Positives = 82/104 (78%)
Frame = -2
Query: 776 AGPPXEVLCLLNMVTPXXXXXXXXXXXXXXXXXXECNKYGVVRSIEIPRPIEGVEVPGCG 597
+GPP EVLCLLNMVTP EC KYGVVRS+EIPRPIEGVEVPGCG
Sbjct: 313 SGPPTEVLCLLNMVTPDELRDEEEYEDILEDIKEECTKYGVVRSVEIPRPIEGVEVPGCG 372
Query: 596 KVFVEFNSIADCQKAQQTLTGRKFSNRVVVTSYFDPDKYHRREF 465
KVFVEFNS+ DCQKAQQ LTGRKFS+RVVVTSYFDPDKYHRREF
Sbjct: 373 KVFVEFNSVLDCQKAQQALTGRKFSDRVVVTSYFDPDKYHRREF 416
>AE014298-2376|AAF48596.1| 416|Drosophila melanogaster CG9998-PA
protein.
Length = 416
Score = 167 bits (405), Expect = 2e-41
Identities = 78/104 (75%), Positives = 82/104 (78%)
Frame = -2
Query: 776 AGPPXEVLCLLNMVTPXXXXXXXXXXXXXXXXXXECNKYGVVRSIEIPRPIEGVEVPGCG 597
+GPP EVLCLLNMVTP EC KYGVVRS+EIPRPIEGVEVPGCG
Sbjct: 313 SGPPTEVLCLLNMVTPDELRDEEEYEDILEDIKEECTKYGVVRSVEIPRPIEGVEVPGCG 372
Query: 596 KVFVEFNSIADCQKAQQTLTGRKFSNRVVVTSYFDPDKYHRREF 465
KVFVEFNS+ DCQKAQQ LTGRKFS+RVVVTSYFDPDKYHRREF
Sbjct: 373 KVFVEFNSVLDCQKAQQALTGRKFSDRVVVTSYFDPDKYHRREF 416
>AY075220-1|AAL68087.1| 449|Drosophila melanogaster AT16577p
protein.
Length = 449
Score = 106 bits (255), Expect = 3e-23
Identities = 52/98 (53%), Positives = 62/98 (63%)
Frame = -2
Query: 773 GPPXEVLCLLNMVTPXXXXXXXXXXXXXXXXXXECNKYGVVRSIEIPRPIEGVEVPGCGK 594
G P E LCLLNMV P EC K+G VRSI+IPRPI GCGK
Sbjct: 346 GSPTETLCLLNMVRPEELLDDEEFEDIRTDIKQECAKFGEVRSIKIPRPIGQFPKRGCGK 405
Query: 593 VFVEFNSIADCQKAQQTLTGRKFSNRVVVTSYFDPDKY 480
VFV+F S+ D QKA + L+GRKFS R+V+TSY+DP+KY
Sbjct: 406 VFVQFESVEDSQKALKALSGRKFSGRIVMTSYYDPEKY 443
>AE013599-3557|AAF46969.1| 449|Drosophila melanogaster CG3162-PA
protein.
Length = 449
Score = 106 bits (255), Expect = 3e-23
Identities = 52/98 (53%), Positives = 62/98 (63%)
Frame = -2
Query: 773 GPPXEVLCLLNMVTPXXXXXXXXXXXXXXXXXXECNKYGVVRSIEIPRPIEGVEVPGCGK 594
G P E LCLLNMV P EC K+G VRSI+IPRPI GCGK
Sbjct: 346 GSPTETLCLLNMVRPEELLDDEEFEDIRTDIKQECAKFGEVRSIKIPRPIGQFPKRGCGK 405
Query: 593 VFVEFNSIADCQKAQQTLTGRKFSNRVVVTSYFDPDKY 480
VFV+F S+ D QKA + L+GRKFS R+V+TSY+DP+KY
Sbjct: 406 VFVQFESVEDSQKALKALSGRKFSGRIVMTSYYDPEKY 443
>DQ295864-1|ABB99954.1| 403|Drosophila melanogaster RNA binding
motif protein 17 protein.
Length = 403
Score = 39.1 bits (87), Expect = 0.007
Identities = 25/65 (38%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
Frame = -2
Query: 671 CN-KYGVVRSIEIPRPIEGVEVPGCGKVFVEFNSIADCQKAQQTLTGRKFSNRVVVTSYF 495
CN KYG V S+ I G K+FVEF I KA L GR F R V ++
Sbjct: 334 CNTKYGEVNSVIIHESF-GTVPEDAVKIFVEFRRIESAIKAVVDLNGRFFGGRQVRAGFY 392
Query: 494 DPDKY 480
+ DK+
Sbjct: 393 NYDKF 397
>BT012503-1|AAS93774.1| 363|Drosophila melanogaster AT25717p
protein.
Length = 363
Score = 39.1 bits (87), Expect = 0.007
Identities = 25/65 (38%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
Frame = -2
Query: 671 CN-KYGVVRSIEIPRPIEGVEVPGCGKVFVEFNSIADCQKAQQTLTGRKFSNRVVVTSYF 495
CN KYG V S+ I G K+FVEF I KA L GR F R V ++
Sbjct: 294 CNTKYGEVNSVIIHESF-GTVPEDAVKIFVEFRRIESAIKAVVDLNGRFFGGRQVRAGFY 352
Query: 494 DPDKY 480
+ DK+
Sbjct: 353 NYDKF 357
>BT012461-1|AAS93732.1| 371|Drosophila melanogaster RE44883p
protein.
Length = 371
Score = 39.1 bits (87), Expect = 0.007
Identities = 25/65 (38%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
Frame = -2
Query: 671 CN-KYGVVRSIEIPRPIEGVEVPGCGKVFVEFNSIADCQKAQQTLTGRKFSNRVVVTSYF 495
CN KYG V S+ I G K+FVEF I KA L GR F R V ++
Sbjct: 302 CNTKYGEVNSVIIHESF-GTVPEDAVKIFVEFRRIESAIKAVVDLNGRFFGGRQVRAGFY 360
Query: 494 DPDKY 480
+ DK+
Sbjct: 361 NYDKF 365
>AY071532-1|AAL49154.1| 379|Drosophila melanogaster RE57542p
protein.
Length = 379
Score = 39.1 bits (87), Expect = 0.007
Identities = 25/65 (38%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
Frame = -2
Query: 671 CN-KYGVVRSIEIPRPIEGVEVPGCGKVFVEFNSIADCQKAQQTLTGRKFSNRVVVTSYF 495
CN KYG V S+ I G K+FVEF I KA L GR F R V ++
Sbjct: 310 CNTKYGEVNSVIIHESF-GTVPEDAVKIFVEFRRIESAIKAVVDLNGRFFGGRQVRAGFY 368
Query: 494 DPDKY 480
+ DK+
Sbjct: 369 NYDKF 373
>AE014134-3634|EAA46009.2| 363|Drosophila melanogaster CG17540-PC,
isoform C protein.
Length = 363
Score = 39.1 bits (87), Expect = 0.007
Identities = 25/65 (38%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
Frame = -2
Query: 671 CN-KYGVVRSIEIPRPIEGVEVPGCGKVFVEFNSIADCQKAQQTLTGRKFSNRVVVTSYF 495
CN KYG V S+ I G K+FVEF I KA L GR F R V ++
Sbjct: 294 CNTKYGEVNSVIIHESF-GTVPEDAVKIFVEFRRIESAIKAVVDLNGRFFGGRQVRAGFY 352
Query: 494 DPDKY 480
+ DK+
Sbjct: 353 NYDKF 357
>AE014134-3633|EAA46010.2| 371|Drosophila melanogaster CG17540-PB,
isoform B protein.
Length = 371
Score = 39.1 bits (87), Expect = 0.007
Identities = 25/65 (38%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
Frame = -2
Query: 671 CN-KYGVVRSIEIPRPIEGVEVPGCGKVFVEFNSIADCQKAQQTLTGRKFSNRVVVTSYF 495
CN KYG V S+ I G K+FVEF I KA L GR F R V ++
Sbjct: 302 CNTKYGEVNSVIIHESF-GTVPEDAVKIFVEFRRIESAIKAVVDLNGRFFGGRQVRAGFY 360
Query: 494 DPDKY 480
+ DK+
Sbjct: 361 NYDKF 365
>AE014134-3632|EAA46008.1| 403|Drosophila melanogaster CG17540-PA,
isoform A protein.
Length = 403
Score = 39.1 bits (87), Expect = 0.007
Identities = 25/65 (38%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
Frame = -2
Query: 671 CN-KYGVVRSIEIPRPIEGVEVPGCGKVFVEFNSIADCQKAQQTLTGRKFSNRVVVTSYF 495
CN KYG V S+ I G K+FVEF I KA L GR F R V ++
Sbjct: 334 CNTKYGEVNSVIIHESF-GTVPEDAVKIFVEFRRIESAIKAVVDLNGRFFGGRQVRAGFY 392
Query: 494 DPDKY 480
+ DK+
Sbjct: 393 NYDKF 397
>BT003317-1|AAO25077.1| 545|Drosophila melanogaster GH01086p
protein.
Length = 545
Score = 33.5 bits (73), Expect = 0.33
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = -2
Query: 596 KVFVEFNSIADCQKAQQTLTGRKFSNRVVVTSYFD 492
K+FVEF++ A+ + ++ L GR F R VV +D
Sbjct: 500 KIFVEFSAGAEAMRGKEALDGRFFGGRRVVAELYD 534
>AY061006-1|AAL28554.1| 545|Drosophila melanogaster HL02140p
protein.
Length = 545
Score = 33.5 bits (73), Expect = 0.33
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = -2
Query: 596 KVFVEFNSIADCQKAQQTLTGRKFSNRVVVTSYFD 492
K+FVEF++ A+ + ++ L GR F R VV +D
Sbjct: 500 KIFVEFSAGAEAMRGKEALDGRFFGGRRVVAELYD 534
>AF479079-1|AAL86452.1| 637|Drosophila melanogaster half pint
protein.
Length = 637
Score = 33.5 bits (73), Expect = 0.33
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = -2
Query: 596 KVFVEFNSIADCQKAQQTLTGRKFSNRVVVTSYFD 492
K+FVEF++ A+ + ++ L GR F R VV +D
Sbjct: 592 KIFVEFSAGAEAMRGKEALDGRFFGGRRVVAELYD 626
>AF190745-1|AAF04132.1| 637|Drosophila melanogaster poly-U binding
splicing factor protein.
Length = 637
Score = 33.5 bits (73), Expect = 0.33
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = -2
Query: 596 KVFVEFNSIADCQKAQQTLTGRKFSNRVVVTSYFD 492
K+FVEF++ A+ + ++ L GR F R VV +D
Sbjct: 592 KIFVEFSAGAEAMRGKEALDGRFFGGRRVVAELYD 626
>AE014296-262|AAG22222.2| 545|Drosophila melanogaster CG12085-PD,
isoform D protein.
Length = 545
Score = 33.5 bits (73), Expect = 0.33
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = -2
Query: 596 KVFVEFNSIADCQKAQQTLTGRKFSNRVVVTSYFD 492
K+FVEF++ A+ + ++ L GR F R VV +D
Sbjct: 500 KIFVEFSAGAEAMRGKEALDGRFFGGRRVVAELYD 534
>AE014296-261|AAF47502.1| 545|Drosophila melanogaster CG12085-PC,
isoform C protein.
Length = 545
Score = 33.5 bits (73), Expect = 0.33
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = -2
Query: 596 KVFVEFNSIADCQKAQQTLTGRKFSNRVVVTSYFD 492
K+FVEF++ A+ + ++ L GR F R VV +D
Sbjct: 500 KIFVEFSAGAEAMRGKEALDGRFFGGRRVVAELYD 534
>AE014296-260|AAG22221.1| 545|Drosophila melanogaster CG12085-PB,
isoform B protein.
Length = 545
Score = 33.5 bits (73), Expect = 0.33
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = -2
Query: 596 KVFVEFNSIADCQKAQQTLTGRKFSNRVVVTSYFD 492
K+FVEF++ A+ + ++ L GR F R VV +D
Sbjct: 500 KIFVEFSAGAEAMRGKEALDGRFFGGRRVVAELYD 534
>AE014296-259|AAF47501.1| 637|Drosophila melanogaster CG12085-PA,
isoform A protein.
Length = 637
Score = 33.5 bits (73), Expect = 0.33
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = -2
Query: 596 KVFVEFNSIADCQKAQQTLTGRKFSNRVVVTSYFD 492
K+FVEF++ A+ + ++ L GR F R VV +D
Sbjct: 592 KIFVEFSAGAEAMRGKEALDGRFFGGRRVVAELYD 626
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,736,090
Number of Sequences: 53049
Number of extensions: 542372
Number of successful extensions: 1009
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 987
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1004
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3623012976
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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