Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_pT_D22
         (554 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY524130-1|AAS17758.1|  211|Anopheles gambiae superoxide dismuta...   143   3e-36
AY745233-1|AAU93512.1|  100|Anopheles gambiae SOD3B protein.           69   1e-13
AY745232-1|AAU93511.1|   75|Anopheles gambiae SOD3A protein.           59   1e-10
AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger transc...    28   0.18 
AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless female-s...    25   1.7  

>AY524130-1|AAS17758.1|  211|Anopheles gambiae superoxide dismutase
           2 protein.
          Length = 211

 Score =  143 bits (347), Expect = 3e-36
 Identities = 64/133 (48%), Positives = 87/133 (65%), Gaps = 2/133 (1%)
 Frame = -3

Query: 456 PSRAIAVLS-TETIRGNITFTQVQDGK-VHVQGGITGLPPGEYGFHVHEKGDLSGGCLST 283
           P +AI  L  T  + GN+T +Q    + V +   + GL PG++GFH+HEKGDL+ GC ST
Sbjct: 20  PRKAIVYLQGTSGVSGNVTISQPSCTEPVFIDINVVGLTPGKHGFHIHEKGDLTDGCAST 79

Query: 282 GSHFNPEHKDHGHPNDVNRHVGDLGNVVFDENHYSRIDLVDDQISLSGPHGIIGRAVVLH 103
           G H+NP+   HG PND  RHVGDLGN+  DEN  ++    D  +SL G   +IGRA+V+H
Sbjct: 80  GGHYNPDKVSHGAPNDQVRHVGDLGNIAADENGIAKTSYSDTVVSLYGARSVIGRAIVIH 139

Query: 102 EKADDYGKSDHPD 64
            + DD GK++HPD
Sbjct: 140 AEVDDLGKTNHPD 152


>AY745233-1|AAU93512.1|  100|Anopheles gambiae SOD3B protein.
          Length = 100

 Score = 68.5 bits (160), Expect = 1e-13
 Identities = 30/73 (41%), Positives = 45/73 (61%)
 Frame = -3

Query: 273 FNPEHKDHGHPNDVNRHVGDLGNVVFDENHYSRIDLVDDQISLSGPHGIIGRAVVLHEKA 94
           +NP+  DHG P+D N HVGDLGN+V      ++I + + +++L G   IIGR + + E  
Sbjct: 1   YNPDGNDHGAPDDANCHVGDLGNIVAYSTGLAKIQIANKKLTLVGDRSIIGRTLSISEYE 60

Query: 93  DDYGKSDHPDYQE 55
           DD G+  H DY +
Sbjct: 61  DDLGRGKH-DYSK 72


>AY745232-1|AAU93511.1|   75|Anopheles gambiae SOD3A protein.
          Length = 75

 Score = 58.8 bits (136), Expect = 1e-10
 Identities = 24/52 (46%), Positives = 35/52 (67%)
 Frame = -3

Query: 225 HVGDLGNVVFDENHYSRIDLVDDQISLSGPHGIIGRAVVLHEKADDYGKSDH 70
           H GD+GN+V DEN  +++DL   QI+LSG   ++GR++V+H   DD G   H
Sbjct: 1   HAGDMGNIVADENGEAKVDLTATQIALSGALNVVGRSLVVHADPDDLGVGGH 52


>AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger
           transcription factor pannier protein.
          Length = 537

 Score = 28.3 bits (60), Expect = 0.18
 Identities = 28/89 (31%), Positives = 40/89 (44%), Gaps = 9/89 (10%)
 Frame = -3

Query: 468 GFTTPSRAIAVLSTET-IRGNIT-FTQVQDGKVHVQGGIT---GLPP----GEYGFHVHE 316
           G  TPS   A+ +T+    GN T F Q++     + G  T    +P     G+Y  +  +
Sbjct: 402 GSNTPSNHGALGNTQNNAGGNQTPFGQIKSESNPLGGASTTPTSVPSSNGYGDYMNNCLQ 461

Query: 315 KGDLSGGCLSTGSHFNPEHKDHGHPNDVN 229
            G  SGG  S  SH +P H   G  + VN
Sbjct: 462 SGYFSGGFSSLHSHHSPHHVSPGMGSTVN 490


>AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless
           female-specific zinc-fingerC isoform protein.
          Length = 593

 Score = 25.0 bits (52), Expect = 1.7
 Identities = 14/52 (26%), Positives = 21/52 (40%)
 Frame = -3

Query: 291 LSTGSHFNPEHKDHGHPNDVNRHVGDLGNVVFDENHYSRIDLVDDQISLSGP 136
           L   +H N       HP  +N +  D+ N++   N  S  +  D    LS P
Sbjct: 405 LEPHAHLNHLRHKSKHPIPINMNADDMNNILAPGNMGSLNESGDSDAHLSHP 456


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 546,707
Number of Sequences: 2352
Number of extensions: 12153
Number of successful extensions: 39
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 39
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 51722361
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)