Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_pT_D20
         (818 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC006632-9|AAK85472.1|  409|Caenorhabditis elegans Hypothetical ...    30   1.7  
U61954-8|AAM98018.1| 1005|Caenorhabditis elegans Hypothetical pr...    29   5.3  
U61954-7|AAK29803.1| 1140|Caenorhabditis elegans Hypothetical pr...    29   5.3  
Z68301-1|CAA92624.1|  360|Caenorhabditis elegans Hypothetical pr...    28   7.0  
Z49068-5|CAA88863.2|  707|Caenorhabditis elegans Hypothetical pr...    28   7.0  
X72943-1|CAA51448.1|  360|Caenorhabditis elegans Wnt-2 protein p...    28   7.0  
Z67756-1|CAA91762.1|  157|Caenorhabditis elegans Hypothetical pr...    28   9.2  

>AC006632-9|AAK85472.1|  409|Caenorhabditis elegans Hypothetical
           protein F28A10.6 protein.
          Length = 409

 Score = 30.3 bits (65), Expect = 1.7
 Identities = 19/57 (33%), Positives = 29/57 (50%)
 Frame = -1

Query: 614 QTKIRELAALGYTPILVPWKTYSQLDNFEEKESYLCSLIENRSRKNHSCTDTVFNSL 444
           Q K+ ELA   YT  L+      QLDN + ++  LC++ +  +  N  C D V  +L
Sbjct: 304 QFKLAELATKLYTSRLIVRNAAEQLDNDDPEKVALCAMAKLHATDN--CFDVVNGAL 358


>U61954-8|AAM98018.1| 1005|Caenorhabditis elegans Hypothetical
           protein F41H10.3b protein.
          Length = 1005

 Score = 28.7 bits (61), Expect = 5.3
 Identities = 11/23 (47%), Positives = 16/23 (69%)
 Frame = -1

Query: 617 FQTKIRELAALGYTPILVPWKTY 549
           FQT++R L  L +T +L P+K Y
Sbjct: 60  FQTEVRALRGLNFTVLLNPYKNY 82


>U61954-7|AAK29803.1| 1140|Caenorhabditis elegans Hypothetical
           protein F41H10.3a protein.
          Length = 1140

 Score = 28.7 bits (61), Expect = 5.3
 Identities = 11/23 (47%), Positives = 16/23 (69%)
 Frame = -1

Query: 617 FQTKIRELAALGYTPILVPWKTY 549
           FQT++R L  L +T +L P+K Y
Sbjct: 60  FQTEVRALRGLNFTVLLNPYKNY 82


>Z68301-1|CAA92624.1|  360|Caenorhabditis elegans Hypothetical
           protein W01B6.1 protein.
          Length = 360

 Score = 28.3 bits (60), Expect = 7.0
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = +3

Query: 132 SKLHNTPPVRSDSAFSDDDPIYCRFNLVSPSQG 230
           +K   T  + +D  F DD P YCRF+  S + G
Sbjct: 267 TKERKTRALPTDLVFMDDSPDYCRFDRHSGTLG 299


>Z49068-5|CAA88863.2|  707|Caenorhabditis elegans Hypothetical
           protein K01C8.5 protein.
          Length = 707

 Score = 28.3 bits (60), Expect = 7.0
 Identities = 12/34 (35%), Positives = 17/34 (50%)
 Frame = -1

Query: 779 ICNDHNGKPMPVKEAFXNDTFGYIRKPPDDNDWI 678
           I  D  G+P+P +  F N  +    +PP D D I
Sbjct: 110 ILTDDRGRPIPRRGMFLNAKYSEAARPPIDEDRI 143


>X72943-1|CAA51448.1|  360|Caenorhabditis elegans Wnt-2 protein
           protein.
          Length = 360

 Score = 28.3 bits (60), Expect = 7.0
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = +3

Query: 132 SKLHNTPPVRSDSAFSDDDPIYCRFNLVSPSQG 230
           +K   T  + +D  F DD P YCRF+  S + G
Sbjct: 267 TKERKTRALPTDLVFMDDSPDYCRFDRHSGTLG 299


>Z67756-1|CAA91762.1|  157|Caenorhabditis elegans Hypothetical
           protein R07A4.2 protein.
          Length = 157

 Score = 27.9 bits (59), Expect = 9.2
 Identities = 12/36 (33%), Positives = 19/36 (52%)
 Frame = +3

Query: 597 FSNFCLKLSCRYITVLN*GIFSTYYKYNPIIVIRRL 704
           F+ FCL L+   +     G +  +YK NP ++ R L
Sbjct: 64  FNGFCLFLTLSLVVANVTGAYDAFYKTNPYVLERYL 99


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,555,403
Number of Sequences: 27780
Number of extensions: 364889
Number of successful extensions: 888
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 868
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 888
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2019417216
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)