Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P17_pT_D19
(591 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z97632-4|CAB10730.1| 755|Homo sapiens HIV-1 Tat specific factor... 189 7e-48
U76992-1|AAB18823.1| 754|Homo sapiens Tat-SF1 protein. 189 7e-48
BT006886-1|AAP35532.1| 755|Homo sapiens HIV TAT specific factor... 189 7e-48
BC009896-1|AAH09896.1| 755|Homo sapiens HIV-1 Tat specific fact... 189 7e-48
AB209303-1|BAD92540.1| 758|Homo sapiens HIV TAT specific factor... 189 7e-48
Z97632-6|CAI42404.1| 244|Homo sapiens HIV-1 Tat specific factor... 61 3e-09
Z97632-5|CAI42403.1| 223|Homo sapiens HIV-1 Tat specific factor... 58 3e-08
U51586-1|AAB41656.1| 541|Homo sapiens siah binding protein 1 pr... 51 3e-06
CR457143-1|CAG33424.1| 559|Homo sapiens SIAHBP1 protein. 51 3e-06
BC011979-1|AAH11979.1| 516|Homo sapiens SIAHBP1 protein protein. 51 3e-06
BC011265-1|AAH11265.1| 516|Homo sapiens SIAHBP1 protein protein. 51 3e-06
BC009734-1|AAH09734.1| 499|Homo sapiens SIAHBP1 protein protein. 51 3e-06
BC008875-1|AAH08875.1| 542|Homo sapiens fuse-binding protein-in... 51 3e-06
AF217197-1|AAF27522.2| 542|Homo sapiens FBP-interacting repress... 51 3e-06
AF190744-1|AAF05605.1| 556|Homo sapiens poly-U binding splicing... 51 3e-06
AF114818-1|AAF23589.1| 559|Homo sapiens Ro ribonucleoprotein-bi... 51 3e-06
AK128391-1|BAC87416.1| 334|Homo sapiens protein ( Homo sapiens ... 47 4e-05
L10911-1|AAA16347.1| 530|Homo sapiens splicing factor protein. 39 0.012
L10910-1|AAA16346.1| 524|Homo sapiens splicing factor protein. 39 0.012
BX537770-1|CAD97833.1| 373|Homo sapiens hypothetical protein pr... 39 0.012
BC141835-1|AAI41836.1| 530|Homo sapiens RNA binding motif prote... 39 0.012
BC131543-1|AAI31544.1| 508|Homo sapiens RBM39 protein protein. 39 0.012
AL357374-9|CAC11119.1| 524|Homo sapiens RNA binding motif prote... 39 0.012
AL357374-8|CAC11118.1| 530|Homo sapiens RNA binding motif prote... 39 0.012
U51224-1|AAA98669.1| 479|Homo sapiens U2AFBPL protein. 38 0.035
D49677-1|BAA08533.1| 482|Homo sapiens U2AF1-RS2 protein. 38 0.035
D49676-1|BAA08532.1| 479|Homo sapiens U2AF1-RS1 protein. 38 0.035
BC113599-1|AAI13600.1| 479|Homo sapiens ZRSR1 protein protein. 38 0.035
BC113480-1|AAI13481.1| 482|Homo sapiens zinc finger (CCCH type)... 38 0.035
BC113454-1|AAI13455.1| 482|Homo sapiens zinc finger (CCCH type)... 38 0.035
BC104811-1|AAI04812.1| 479|Homo sapiens ZRSR1 protein protein. 38 0.035
BC050451-1|AAH50451.2| 482|Homo sapiens zinc finger (CCCH type)... 38 0.035
BC039322-1|AAH39322.1| 401|Homo sapiens RBM17 protein protein. 38 0.035
BC009064-1|AAH09064.1| 369|Homo sapiens RBM17 protein protein. 38 0.035
BC007871-1|AAH07871.1| 401|Homo sapiens RNA binding motif prote... 38 0.035
AL157395-8|CAH73602.1| 401|Homo sapiens RNA binding motif prote... 38 0.035
AF542550-1|AAQ09533.1| 401|Homo sapiens unknown protein. 38 0.035
AF449428-1|AAL57515.1| 261|Homo sapiens SRrp35 protein. 37 0.061
BC021715-1|AAH21715.1| 261|Homo sapiens serine-arginine repress... 36 0.11
BC010074-1|AAH10074.1| 173|Homo sapiens FUSIP1 protein protein. 35 0.19
BC005039-1|AAH05039.1| 262|Homo sapiens FUS interacting protein... 35 0.19
BC001107-1|AAH01107.1| 183|Homo sapiens FUS interacting protein... 35 0.19
AY150181-1|AAN65381.1| 183|Homo sapiens splicing factor SRp38-2... 35 0.19
AY150180-1|AAN65380.1| 262|Homo sapiens splicing factor SRp38 p... 35 0.19
AY048592-2|AAL06099.1| 262|Homo sapiens TLS-associated SR prote... 35 0.19
AY048592-1|AAL06098.1| 183|Homo sapiens TLS-associated SR prote... 35 0.19
AL590609-10|CAI14808.1| 262|Homo sapiens FUS interacting protei... 35 0.19
AL590609-9|CAI14807.1| 261|Homo sapiens FUS interacting protein... 35 0.19
AL590609-8|CAI14805.1| 173|Homo sapiens FUS interacting protein... 35 0.19
AL590609-7|CAI14806.1| 172|Homo sapiens FUS interacting protein... 35 0.19
AL590609-6|CAI14803.1| 183|Homo sapiens FUS interacting protein... 35 0.19
AL590609-5|CAI14804.1| 182|Homo sapiens FUS interacting protein... 35 0.19
AK222994-1|BAD96714.1| 262|Homo sapiens FUS interacting protein... 35 0.19
AK001286-1|BAA91601.1| 183|Homo sapiens protein ( Homo sapiens ... 35 0.19
AF449427-1|AAL57514.1| 262|Homo sapiens SRrp40 protein. 35 0.19
AF419332-1|AAL16666.1| 261|Homo sapiens TLS-associated protein ... 35 0.19
AF419331-1|AAL16665.1| 183|Homo sapiens TLS-associated protein ... 35 0.19
AF067730-1|AAC26727.1| 262|Homo sapiens TLS-associated protein ... 35 0.19
AF047448-1|AAC70918.1| 183|Homo sapiens TLS-associated protein ... 35 0.19
AK074860-1|BAC11252.1| 180|Homo sapiens protein ( Homo sapiens ... 34 0.33
BC025234-1|AAH25234.1| 180|Homo sapiens STMN3 protein protein. 32 1.3
BC009381-1|AAH09381.1| 180|Homo sapiens STMN3 protein protein. 32 1.3
AL353715-3|CAC16222.1| 180|Homo sapiens stathmin-like 3 protein. 32 1.3
AF217796-1|AAF35245.1| 180|Homo sapiens SCG10 like-protein prot... 32 1.3
AF069709-1|AAD12730.1| 180|Homo sapiens SCG10-like-protein prot... 32 1.3
U75686-1|AAB97309.1| 644|Homo sapiens polyadenylate binding pro... 31 2.3
U33818-1|AAC50350.1| 644|Homo sapiens inducible poly(A)-binding... 31 2.3
D12799-1|BAA02244.1| 193|Homo sapiens polyadenylate binding pro... 31 2.3
BC118568-1|AAI18569.1| 252|Homo sapiens PABPC4 protein protein. 31 2.3
BC106908-1|AAI06909.1| 281|Homo sapiens PABPC4 protein protein. 31 2.3
BC094755-1|AAH94755.1| 660|Homo sapiens PABPC4 protein protein. 31 2.3
BC071591-1|AAH71591.1| 660|Homo sapiens PABPC4 protein protein. 31 2.3
BC065540-1|AAH65540.1| 631|Homo sapiens PABPC4 protein protein. 31 2.3
AL845289-3|CAI12300.1| 644|Homo sapiens poly(A) binding protein... 31 2.3
AL845289-2|CAI12298.1| 660|Homo sapiens poly(A) binding protein... 31 2.3
AL845289-1|CAI12299.1| 615|Homo sapiens poly(A) binding protein... 31 2.3
AL365277-15|CAI16425.1| 410|Homo sapiens poly(A) binding protei... 31 2.3
AL365277-4|CAI16414.1| 644|Homo sapiens poly(A) binding protein... 31 2.3
AL365277-3|CAI16412.1| 660|Homo sapiens poly(A) binding protein... 31 2.3
AL365277-2|CAI16413.1| 615|Homo sapiens poly(A) binding protein... 31 2.3
AK222917-1|BAD96637.1| 371|Homo sapiens PABPC4 protein variant ... 31 2.3
AK127552-1|BAC87031.1| 357|Homo sapiens protein ( Homo sapiens ... 31 2.3
AB208962-1|BAD92199.1| 358|Homo sapiens PABPC4 protein variant ... 31 2.3
BC014917-1|AAH14917.1| 314|Homo sapiens UHMK1 protein protein. 30 5.3
AL359699-2|CAH70392.1| 419|Homo sapiens U2AF homology motif (UH... 30 5.3
AJ536197-1|CAD60192.1| 419|Homo sapiens KIS protein protein. 30 5.3
>Z97632-4|CAB10730.1| 755|Homo sapiens HIV-1 Tat specific factor 1
protein.
Length = 755
Score = 189 bits (460), Expect = 7e-48
Identities = 87/189 (46%), Positives = 124/189 (65%), Gaps = 1/189 (0%)
Frame = -2
Query: 578 KGDALCTYIKIESVDLALKLLDGSDCKGNTIKVERAQFQLKGEYNPAXXXXXXXXXXXXX 399
KGD LC Y+K ESV+LALKLLD + +G + VE A+FQLKGEY+ +
Sbjct: 181 KGDGLCCYLKRESVELALKLLDEDEIRGYKLHVEVAKFQLKGEYDASKKKKKCKDYKKKL 240
Query: 398 XXXXXXXLFDWRPEKFIG-ERSKHERVVIVKNLFHSSDFDKEVQLILDYQQDLREECGKC 222
DWRPE+ G R +HERVVI+KN+FH DF+ + ++ + ++DLR EC K
Sbjct: 241 SMQQKQ--LDWRPERRAGPSRMRHERVVIIKNMFHPMDFEDDPLVLNEIREDLRVECSKF 298
Query: 221 GDVRKVVLYDRHPEGVAQITMKEPEQADAVVQLINGRWFGKRQITAEIWDGKTKYKIAET 42
G +RK++L+DRHP+GVA ++ ++PE+AD +Q ++GRWFG RQITA+ WDG T Y++ ET
Sbjct: 299 GQIRKLLLFDRHPDGVASVSFRDPEEADYCIQTLDGRWFGGRQITAQAWDGTTDYQVEET 358
Query: 41 DADMXTEVR 15
+ +R
Sbjct: 359 SREREERLR 367
>U76992-1|AAB18823.1| 754|Homo sapiens Tat-SF1 protein.
Length = 754
Score = 189 bits (460), Expect = 7e-48
Identities = 87/189 (46%), Positives = 124/189 (65%), Gaps = 1/189 (0%)
Frame = -2
Query: 578 KGDALCTYIKIESVDLALKLLDGSDCKGNTIKVERAQFQLKGEYNPAXXXXXXXXXXXXX 399
KGD LC Y+K ESV+LALKLLD + +G + VE A+FQLKGEY+ +
Sbjct: 181 KGDGLCCYLKRESVELALKLLDEDEIRGYKLHVEVAKFQLKGEYDASKKKKKCKDYKKKL 240
Query: 398 XXXXXXXLFDWRPEKFIG-ERSKHERVVIVKNLFHSSDFDKEVQLILDYQQDLREECGKC 222
DWRPE+ G R +HERVVI+KN+FH DF+ + ++ + ++DLR EC K
Sbjct: 241 SMQQKQ--LDWRPERRAGPSRMRHERVVIIKNMFHPMDFEDDPLVLNEIREDLRVECSKF 298
Query: 221 GDVRKVVLYDRHPEGVAQITMKEPEQADAVVQLINGRWFGKRQITAEIWDGKTKYKIAET 42
G +RK++L+DRHP+GVA ++ ++PE+AD +Q ++GRWFG RQITA+ WDG T Y++ ET
Sbjct: 299 GQIRKLLLFDRHPDGVASVSFRDPEEADYCIQTLDGRWFGGRQITAQAWDGTTDYQVEET 358
Query: 41 DADMXTEVR 15
+ +R
Sbjct: 359 SREREERLR 367
>BT006886-1|AAP35532.1| 755|Homo sapiens HIV TAT specific factor 1
protein.
Length = 755
Score = 189 bits (460), Expect = 7e-48
Identities = 87/189 (46%), Positives = 124/189 (65%), Gaps = 1/189 (0%)
Frame = -2
Query: 578 KGDALCTYIKIESVDLALKLLDGSDCKGNTIKVERAQFQLKGEYNPAXXXXXXXXXXXXX 399
KGD LC Y+K ESV+LALKLLD + +G + VE A+FQLKGEY+ +
Sbjct: 181 KGDGLCCYLKRESVELALKLLDEDEIRGYKLHVEVAKFQLKGEYDASKKKKKCKDYKKKL 240
Query: 398 XXXXXXXLFDWRPEKFIG-ERSKHERVVIVKNLFHSSDFDKEVQLILDYQQDLREECGKC 222
DWRPE+ G R +HERVVI+KN+FH DF+ + ++ + ++DLR EC K
Sbjct: 241 SMQQKQ--LDWRPERRAGPSRMRHERVVIIKNMFHPMDFEDDPLVLNEIREDLRVECSKF 298
Query: 221 GDVRKVVLYDRHPEGVAQITMKEPEQADAVVQLINGRWFGKRQITAEIWDGKTKYKIAET 42
G +RK++L+DRHP+GVA ++ ++PE+AD +Q ++GRWFG RQITA+ WDG T Y++ ET
Sbjct: 299 GQIRKLLLFDRHPDGVASVSFRDPEEADYCIQTLDGRWFGGRQITAQAWDGTTDYQVEET 358
Query: 41 DADMXTEVR 15
+ +R
Sbjct: 359 SREREERLR 367
>BC009896-1|AAH09896.1| 755|Homo sapiens HIV-1 Tat specific factor
1 protein.
Length = 755
Score = 189 bits (460), Expect = 7e-48
Identities = 87/189 (46%), Positives = 124/189 (65%), Gaps = 1/189 (0%)
Frame = -2
Query: 578 KGDALCTYIKIESVDLALKLLDGSDCKGNTIKVERAQFQLKGEYNPAXXXXXXXXXXXXX 399
KGD LC Y+K ESV+LALKLLD + +G + VE A+FQLKGEY+ +
Sbjct: 181 KGDGLCCYLKRESVELALKLLDEDEIRGYKLHVEVAKFQLKGEYDASKKKKKCKDYKKKL 240
Query: 398 XXXXXXXLFDWRPEKFIG-ERSKHERVVIVKNLFHSSDFDKEVQLILDYQQDLREECGKC 222
DWRPE+ G R +HERVVI+KN+FH DF+ + ++ + ++DLR EC K
Sbjct: 241 SMQQKQ--LDWRPERRAGPSRMRHERVVIIKNMFHPMDFEDDPLVLNEIREDLRVECSKF 298
Query: 221 GDVRKVVLYDRHPEGVAQITMKEPEQADAVVQLINGRWFGKRQITAEIWDGKTKYKIAET 42
G +RK++L+DRHP+GVA ++ ++PE+AD +Q ++GRWFG RQITA+ WDG T Y++ ET
Sbjct: 299 GQIRKLLLFDRHPDGVASVSFRDPEEADYCIQTLDGRWFGGRQITAQAWDGTTDYQVEET 358
Query: 41 DADMXTEVR 15
+ +R
Sbjct: 359 SREREERLR 367
>AB209303-1|BAD92540.1| 758|Homo sapiens HIV TAT specific factor 1
variant protein.
Length = 758
Score = 189 bits (460), Expect = 7e-48
Identities = 87/189 (46%), Positives = 124/189 (65%), Gaps = 1/189 (0%)
Frame = -2
Query: 578 KGDALCTYIKIESVDLALKLLDGSDCKGNTIKVERAQFQLKGEYNPAXXXXXXXXXXXXX 399
KGD LC Y+K ESV+LALKLLD + +G + VE A+FQLKGEY+ +
Sbjct: 184 KGDGLCCYLKRESVELALKLLDEDEIRGYKLHVEVAKFQLKGEYDASKKKKKCKDYKKKL 243
Query: 398 XXXXXXXLFDWRPEKFIG-ERSKHERVVIVKNLFHSSDFDKEVQLILDYQQDLREECGKC 222
DWRPE+ G R +HERVVI+KN+FH DF+ + ++ + ++DLR EC K
Sbjct: 244 SMQQKQ--LDWRPERRAGPSRMRHERVVIIKNMFHPMDFEDDPLVLNEIREDLRVECSKF 301
Query: 221 GDVRKVVLYDRHPEGVAQITMKEPEQADAVVQLINGRWFGKRQITAEIWDGKTKYKIAET 42
G +RK++L+DRHP+GVA ++ ++PE+AD +Q ++GRWFG RQITA+ WDG T Y++ ET
Sbjct: 302 GQIRKLLLFDRHPDGVASVSFRDPEEADYCIQTLDGRWFGGRQITAQAWDGTTDYQVEET 361
Query: 41 DADMXTEVR 15
+ +R
Sbjct: 362 SREREERLR 370
>Z97632-6|CAI42404.1| 244|Homo sapiens HIV-1 Tat specific factor 1
protein.
Length = 244
Score = 60.9 bits (141), Expect = 3e-09
Identities = 28/45 (62%), Positives = 35/45 (77%)
Frame = -2
Query: 578 KGDALCTYIKIESVDLALKLLDGSDCKGNTIKVERAQFQLKGEYN 444
KGD LC Y+K ESV+LALKLLD + +G + VE A+FQLKGEY+
Sbjct: 181 KGDGLCCYLKRESVELALKLLDEDEIRGYKLHVEVAKFQLKGEYD 225
>Z97632-5|CAI42403.1| 223|Homo sapiens HIV-1 Tat specific factor 1
protein.
Length = 223
Score = 57.6 bits (133), Expect = 3e-08
Identities = 27/43 (62%), Positives = 33/43 (76%)
Frame = -2
Query: 578 KGDALCTYIKIESVDLALKLLDGSDCKGNTIKVERAQFQLKGE 450
KGD LC Y+K ESV+LALKLLD + +G + VE A+FQLKGE
Sbjct: 181 KGDGLCCYLKRESVELALKLLDEDEIRGYKLHVEVAKFQLKGE 223
>U51586-1|AAB41656.1| 541|Homo sapiens siah binding protein 1
protein.
Length = 541
Score = 51.2 bits (117), Expect = 3e-06
Identities = 29/98 (29%), Positives = 50/98 (51%), Gaps = 8/98 (8%)
Frame = -2
Query: 341 RSKHERVVIVKNLFHSSDFDKEVQLILDYQQDLREECGKCGDVRKVVLYDRHP--EGVAQ 168
R + V++++N+ D D D + ++ EECGK G V +V++Y E A+
Sbjct: 439 RKQESTVMVLRNMVDPKDIDD------DLEGEVTEECGKFGAVNRVIIYQEKQGEEEDAE 492
Query: 167 ITMKE------PEQADAVVQLINGRWFGKRQITAEIWD 72
I +K + +Q +NGRWF R++ AE++D
Sbjct: 493 IIVKIFVEFSIASETHKAIQALNGRWFAGRKVVAEVYD 530
>CR457143-1|CAG33424.1| 559|Homo sapiens SIAHBP1 protein.
Length = 559
Score = 51.2 bits (117), Expect = 3e-06
Identities = 29/98 (29%), Positives = 50/98 (51%), Gaps = 8/98 (8%)
Frame = -2
Query: 341 RSKHERVVIVKNLFHSSDFDKEVQLILDYQQDLREECGKCGDVRKVVLYDRHP--EGVAQ 168
R + V++++N+ D D D + ++ EECGK G V +V++Y E A+
Sbjct: 457 RKQESTVMVLRNMVDPKDIDD------DLEGEVTEECGKFGAVNRVIIYQEKQGEEEDAE 510
Query: 167 ITMKE------PEQADAVVQLINGRWFGKRQITAEIWD 72
I +K + +Q +NGRWF R++ AE++D
Sbjct: 511 IIVKIFVEFSIASETHKAIQALNGRWFAGRKVVAEVYD 548
>BC011979-1|AAH11979.1| 516|Homo sapiens SIAHBP1 protein protein.
Length = 516
Score = 51.2 bits (117), Expect = 3e-06
Identities = 29/98 (29%), Positives = 50/98 (51%), Gaps = 8/98 (8%)
Frame = -2
Query: 341 RSKHERVVIVKNLFHSSDFDKEVQLILDYQQDLREECGKCGDVRKVVLYDRHP--EGVAQ 168
R + V++++N+ D D D + ++ EECGK G V +V++Y E A+
Sbjct: 414 RKQESTVMVLRNMVDPKDIDD------DLEGEVTEECGKFGAVNRVIIYQEKQGEEEDAE 467
Query: 167 ITMKE------PEQADAVVQLINGRWFGKRQITAEIWD 72
I +K + +Q +NGRWF R++ AE++D
Sbjct: 468 IIVKIFVEFSIASETHKAIQALNGRWFAGRKVVAEVYD 505
>BC011265-1|AAH11265.1| 516|Homo sapiens SIAHBP1 protein protein.
Length = 516
Score = 51.2 bits (117), Expect = 3e-06
Identities = 29/98 (29%), Positives = 50/98 (51%), Gaps = 8/98 (8%)
Frame = -2
Query: 341 RSKHERVVIVKNLFHSSDFDKEVQLILDYQQDLREECGKCGDVRKVVLYDRHP--EGVAQ 168
R + V++++N+ D D D + ++ EECGK G V +V++Y E A+
Sbjct: 414 RKQESTVMVLRNMVDPKDIDD------DLEGEVTEECGKFGAVNRVIIYQEKQGEEEDAE 467
Query: 167 ITMKE------PEQADAVVQLINGRWFGKRQITAEIWD 72
I +K + +Q +NGRWF R++ AE++D
Sbjct: 468 IIVKIFVEFSIASETHKAIQALNGRWFAGRKVVAEVYD 505
>BC009734-1|AAH09734.1| 499|Homo sapiens SIAHBP1 protein protein.
Length = 499
Score = 51.2 bits (117), Expect = 3e-06
Identities = 29/98 (29%), Positives = 50/98 (51%), Gaps = 8/98 (8%)
Frame = -2
Query: 341 RSKHERVVIVKNLFHSSDFDKEVQLILDYQQDLREECGKCGDVRKVVLYDRHP--EGVAQ 168
R + V++++N+ D D D + ++ EECGK G V +V++Y E A+
Sbjct: 397 RKQESTVMVLRNMVDPKDIDD------DLEGEVTEECGKFGAVNRVIIYQEKQGEEEDAE 450
Query: 167 ITMKE------PEQADAVVQLINGRWFGKRQITAEIWD 72
I +K + +Q +NGRWF R++ AE++D
Sbjct: 451 IIVKIFVEFSIASETHKAIQALNGRWFAGRKVVAEVYD 488
>BC008875-1|AAH08875.1| 542|Homo sapiens fuse-binding
protein-interacting repressor protein.
Length = 542
Score = 51.2 bits (117), Expect = 3e-06
Identities = 29/98 (29%), Positives = 50/98 (51%), Gaps = 8/98 (8%)
Frame = -2
Query: 341 RSKHERVVIVKNLFHSSDFDKEVQLILDYQQDLREECGKCGDVRKVVLYDRHP--EGVAQ 168
R + V++++N+ D D D + ++ EECGK G V +V++Y E A+
Sbjct: 440 RKQESTVMVLRNMVDPKDIDD------DLEGEVTEECGKFGAVNRVIIYQEKQGEEEDAE 493
Query: 167 ITMKE------PEQADAVVQLINGRWFGKRQITAEIWD 72
I +K + +Q +NGRWF R++ AE++D
Sbjct: 494 IIVKIFVEFSIASETHKAIQALNGRWFAGRKVVAEVYD 531
>AF217197-1|AAF27522.2| 542|Homo sapiens FBP-interacting repressor
protein.
Length = 542
Score = 51.2 bits (117), Expect = 3e-06
Identities = 29/98 (29%), Positives = 50/98 (51%), Gaps = 8/98 (8%)
Frame = -2
Query: 341 RSKHERVVIVKNLFHSSDFDKEVQLILDYQQDLREECGKCGDVRKVVLYDRHP--EGVAQ 168
R + V++++N+ D D D + ++ EECGK G V +V++Y E A+
Sbjct: 440 RKQESTVMVLRNMVDPKDIDD------DLEGEVTEECGKFGAVNRVIIYQEKQGEEEDAE 493
Query: 167 ITMKE------PEQADAVVQLINGRWFGKRQITAEIWD 72
I +K + +Q +NGRWF R++ AE++D
Sbjct: 494 IIVKIFVEFSIASETHKAIQALNGRWFAGRKVVAEVYD 531
>AF190744-1|AAF05605.1| 556|Homo sapiens poly-U binding splicing
factor PUF60 protein.
Length = 556
Score = 51.2 bits (117), Expect = 3e-06
Identities = 29/98 (29%), Positives = 50/98 (51%), Gaps = 8/98 (8%)
Frame = -2
Query: 341 RSKHERVVIVKNLFHSSDFDKEVQLILDYQQDLREECGKCGDVRKVVLYDRHP--EGVAQ 168
R + V++++N+ D D D + ++ EECGK G V +V++Y E A+
Sbjct: 454 RKQESTVMVLRNMVDPKDIDD------DLEGEVTEECGKFGAVNRVIIYQEKQGEEEDAE 507
Query: 167 ITMKE------PEQADAVVQLINGRWFGKRQITAEIWD 72
I +K + +Q +NGRWF R++ AE++D
Sbjct: 508 IIVKIFVEFSIASETHKAIQALNGRWFAGRKVVAEVYD 545
>AF114818-1|AAF23589.1| 559|Homo sapiens Ro
ribonucleoprotein-binding protein 1 protein.
Length = 559
Score = 51.2 bits (117), Expect = 3e-06
Identities = 29/98 (29%), Positives = 50/98 (51%), Gaps = 8/98 (8%)
Frame = -2
Query: 341 RSKHERVVIVKNLFHSSDFDKEVQLILDYQQDLREECGKCGDVRKVVLYDRHP--EGVAQ 168
R + V++++N+ D D D + ++ EECGK G V +V++Y E A+
Sbjct: 457 RKQESTVMVLRNMVDPKDIDD------DLEGEVTEECGKFGAVNRVIIYQEKQGEEEDAE 510
Query: 167 ITMKE------PEQADAVVQLINGRWFGKRQITAEIWD 72
I +K + +Q +NGRWF R++ AE++D
Sbjct: 511 IIVKIFVEFSIASETHKAIQALNGRWFAGRKVVAEVYD 548
>AK128391-1|BAC87416.1| 334|Homo sapiens protein ( Homo sapiens
cDNA FLJ46534 fis, clone THYMU3037052, weakly similar
to Homo sapiens HIV TAT specific factor 1 (HTATSF1). ).
Length = 334
Score = 47.2 bits (107), Expect = 4e-05
Identities = 42/155 (27%), Positives = 66/155 (42%)
Frame = -2
Query: 578 KGDALCTYIKIESVDLALKLLDGSDCKGNTIKVERAQFQLKGEYNPAXXXXXXXXXXXXX 399
KGD LC + K E+VDLA LD D T++VE A++Q G+Y +
Sbjct: 22 KGDRLCDHWKREAVDLAFMHLDEDDTGNCTLQVEVAKYQRNGKYEASGRKCANHRKAPSL 81
Query: 398 XXXXXXXLFDWRPEKFIGERSKHERVVIVKNLFHSSDFDKEVQLILDYQQDLREECGKCG 219
RP + +R + + N FH DF+ D Q+ K G
Sbjct: 82 RQK--------RPRRSPSKR-RDTSELSSSNTFHPVDFE-------DGQRRPSRRV-KFG 124
Query: 218 DVRKVVLYDRHPEGVAQITMKEPEQADAVVQLING 114
R+++++DRHP G ++ + A +Q +G
Sbjct: 125 PTRRLIVFDRHPAG-EPVSWRNAGAAAHCIQTFDG 158
>L10911-1|AAA16347.1| 530|Homo sapiens splicing factor protein.
Length = 530
Score = 39.1 bits (87), Expect = 0.012
Identities = 22/77 (28%), Positives = 37/77 (48%)
Frame = -2
Query: 314 VKNLFHSSDFDKEVQLILDYQQDLREECGKCGDVRKVVLYDRHPEGVAQITMKEPEQADA 135
+ N+F+ ++EV + + D+ EEC K G V + + +G + A A
Sbjct: 428 LSNMFNPQT-EEEVGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQGNVYVKCPSIAAAIA 486
Query: 134 VVQLINGRWFGKRQITA 84
V ++GRWF + ITA
Sbjct: 487 AVNALHGRWFAGKMITA 503
>L10910-1|AAA16346.1| 524|Homo sapiens splicing factor protein.
Length = 524
Score = 39.1 bits (87), Expect = 0.012
Identities = 22/77 (28%), Positives = 37/77 (48%)
Frame = -2
Query: 314 VKNLFHSSDFDKEVQLILDYQQDLREECGKCGDVRKVVLYDRHPEGVAQITMKEPEQADA 135
+ N+F+ ++EV + + D+ EEC K G V + + +G + A A
Sbjct: 422 LSNMFNPQT-EEEVGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQGNVYVKCPSIAAAIA 480
Query: 134 VVQLINGRWFGKRQITA 84
V ++GRWF + ITA
Sbjct: 481 AVNALHGRWFAGKMITA 497
>BX537770-1|CAD97833.1| 373|Homo sapiens hypothetical protein
protein.
Length = 373
Score = 39.1 bits (87), Expect = 0.012
Identities = 22/77 (28%), Positives = 37/77 (48%)
Frame = -2
Query: 314 VKNLFHSSDFDKEVQLILDYQQDLREECGKCGDVRKVVLYDRHPEGVAQITMKEPEQADA 135
+ N+F+ ++EV + + D+ EEC K G V + + +G + A A
Sbjct: 271 LSNMFNPQT-EEEVGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQGNVYVKCPSIAAAIA 329
Query: 134 VVQLINGRWFGKRQITA 84
V ++GRWF + ITA
Sbjct: 330 AVNALHGRWFAGKMITA 346
>BC141835-1|AAI41836.1| 530|Homo sapiens RNA binding motif protein
39 protein.
Length = 530
Score = 39.1 bits (87), Expect = 0.012
Identities = 22/77 (28%), Positives = 37/77 (48%)
Frame = -2
Query: 314 VKNLFHSSDFDKEVQLILDYQQDLREECGKCGDVRKVVLYDRHPEGVAQITMKEPEQADA 135
+ N+F+ ++EV + + D+ EEC K G V + + +G + A A
Sbjct: 428 LSNMFNPQT-EEEVGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQGNVYVKCPSIAAAIA 486
Query: 134 VVQLINGRWFGKRQITA 84
V ++GRWF + ITA
Sbjct: 487 AVNALHGRWFAGKMITA 503
>BC131543-1|AAI31544.1| 508|Homo sapiens RBM39 protein protein.
Length = 508
Score = 39.1 bits (87), Expect = 0.012
Identities = 22/77 (28%), Positives = 37/77 (48%)
Frame = -2
Query: 314 VKNLFHSSDFDKEVQLILDYQQDLREECGKCGDVRKVVLYDRHPEGVAQITMKEPEQADA 135
+ N+F+ ++EV + + D+ EEC K G V + + +G + A A
Sbjct: 406 LSNMFNPQT-EEEVGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQGNVYVKCPSIAAAIA 464
Query: 134 VVQLINGRWFGKRQITA 84
V ++GRWF + ITA
Sbjct: 465 AVNALHGRWFAGKMITA 481
>AL357374-9|CAC11119.1| 524|Homo sapiens RNA binding motif protein
39 protein.
Length = 524
Score = 39.1 bits (87), Expect = 0.012
Identities = 22/77 (28%), Positives = 37/77 (48%)
Frame = -2
Query: 314 VKNLFHSSDFDKEVQLILDYQQDLREECGKCGDVRKVVLYDRHPEGVAQITMKEPEQADA 135
+ N+F+ ++EV + + D+ EEC K G V + + +G + A A
Sbjct: 422 LSNMFNPQT-EEEVGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQGNVYVKCPSIAAAIA 480
Query: 134 VVQLINGRWFGKRQITA 84
V ++GRWF + ITA
Sbjct: 481 AVNALHGRWFAGKMITA 497
>AL357374-8|CAC11118.1| 530|Homo sapiens RNA binding motif protein
39 protein.
Length = 530
Score = 39.1 bits (87), Expect = 0.012
Identities = 22/77 (28%), Positives = 37/77 (48%)
Frame = -2
Query: 314 VKNLFHSSDFDKEVQLILDYQQDLREECGKCGDVRKVVLYDRHPEGVAQITMKEPEQADA 135
+ N+F+ ++EV + + D+ EEC K G V + + +G + A A
Sbjct: 428 LSNMFNPQT-EEEVGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQGNVYVKCPSIAAAIA 486
Query: 134 VVQLINGRWFGKRQITA 84
V ++GRWF + ITA
Sbjct: 487 AVNALHGRWFAGKMITA 503
>U51224-1|AAA98669.1| 479|Homo sapiens U2AFBPL protein.
Length = 479
Score = 37.5 bits (83), Expect = 0.035
Identities = 22/82 (26%), Positives = 39/82 (47%), Gaps = 3/82 (3%)
Frame = -2
Query: 284 DKEVQLILDYQQDLREECGKCGDVRKVVL---YDRHPEGVAQITMKEPEQADAVVQLING 114
++ Q LD+ +D+ E G V + + + H G + + E+ A + L NG
Sbjct: 235 EETYQQFLDFYEDVLPEFKNVGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAALSLFNG 294
Query: 113 RWFGKRQITAEIWDGKTKYKIA 48
RW+ RQ+ E T++K+A
Sbjct: 295 RWYAGRQLQCEFCP-VTRWKMA 315
>D49677-1|BAA08533.1| 482|Homo sapiens U2AF1-RS2 protein.
Length = 482
Score = 37.5 bits (83), Expect = 0.035
Identities = 22/82 (26%), Positives = 39/82 (47%), Gaps = 3/82 (3%)
Frame = -2
Query: 284 DKEVQLILDYQQDLREECGKCGDVRKVVL---YDRHPEGVAQITMKEPEQADAVVQLING 114
++ Q LD+ +D+ E G V + + + H G + + E+ A + L NG
Sbjct: 230 EETYQQFLDFYEDVLPEFKNVGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAALSLFNG 289
Query: 113 RWFGKRQITAEIWDGKTKYKIA 48
RW+ RQ+ E T++K+A
Sbjct: 290 RWYAGRQLQCEFCP-VTRWKMA 310
>D49676-1|BAA08532.1| 479|Homo sapiens U2AF1-RS1 protein.
Length = 479
Score = 37.5 bits (83), Expect = 0.035
Identities = 22/82 (26%), Positives = 39/82 (47%), Gaps = 3/82 (3%)
Frame = -2
Query: 284 DKEVQLILDYQQDLREECGKCGDVRKVVL---YDRHPEGVAQITMKEPEQADAVVQLING 114
++ Q LD+ +D+ E G V + + + H G + + E+ A + L NG
Sbjct: 235 EETYQQFLDFYEDVLPEFKNVGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAALSLFNG 294
Query: 113 RWFGKRQITAEIWDGKTKYKIA 48
RW+ RQ+ E T++K+A
Sbjct: 295 RWYAGRQLQCEFCP-VTRWKMA 315
>BC113599-1|AAI13600.1| 479|Homo sapiens ZRSR1 protein protein.
Length = 479
Score = 37.5 bits (83), Expect = 0.035
Identities = 22/82 (26%), Positives = 39/82 (47%), Gaps = 3/82 (3%)
Frame = -2
Query: 284 DKEVQLILDYQQDLREECGKCGDVRKVVL---YDRHPEGVAQITMKEPEQADAVVQLING 114
++ Q LD+ +D+ E G V + + + H G + + E+ A + L NG
Sbjct: 235 EETYQQFLDFYEDVLPEFKNVGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAALSLFNG 294
Query: 113 RWFGKRQITAEIWDGKTKYKIA 48
RW+ RQ+ E T++K+A
Sbjct: 295 RWYAGRQLQCEFCP-VTRWKMA 315
>BC113480-1|AAI13481.1| 482|Homo sapiens zinc finger (CCCH type),
RNA-binding motif and serine/arginine rich 2 protein.
Length = 482
Score = 37.5 bits (83), Expect = 0.035
Identities = 22/82 (26%), Positives = 39/82 (47%), Gaps = 3/82 (3%)
Frame = -2
Query: 284 DKEVQLILDYQQDLREECGKCGDVRKVVL---YDRHPEGVAQITMKEPEQADAVVQLING 114
++ Q LD+ +D+ E G V + + + H G + + E+ A + L NG
Sbjct: 230 EETYQQFLDFYEDVLPEFKNVGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAALSLFNG 289
Query: 113 RWFGKRQITAEIWDGKTKYKIA 48
RW+ RQ+ E T++K+A
Sbjct: 290 RWYAGRQLQCEFCP-VTRWKMA 310
>BC113454-1|AAI13455.1| 482|Homo sapiens zinc finger (CCCH type),
RNA-binding motif and serine/arginine rich 2 protein.
Length = 482
Score = 37.5 bits (83), Expect = 0.035
Identities = 22/82 (26%), Positives = 39/82 (47%), Gaps = 3/82 (3%)
Frame = -2
Query: 284 DKEVQLILDYQQDLREECGKCGDVRKVVL---YDRHPEGVAQITMKEPEQADAVVQLING 114
++ Q LD+ +D+ E G V + + + H G + + E+ A + L NG
Sbjct: 230 EETYQQFLDFYEDVLPEFKNVGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAALSLFNG 289
Query: 113 RWFGKRQITAEIWDGKTKYKIA 48
RW+ RQ+ E T++K+A
Sbjct: 290 RWYAGRQLQCEFCP-VTRWKMA 310
>BC104811-1|AAI04812.1| 479|Homo sapiens ZRSR1 protein protein.
Length = 479
Score = 37.5 bits (83), Expect = 0.035
Identities = 22/82 (26%), Positives = 39/82 (47%), Gaps = 3/82 (3%)
Frame = -2
Query: 284 DKEVQLILDYQQDLREECGKCGDVRKVVL---YDRHPEGVAQITMKEPEQADAVVQLING 114
++ Q LD+ +D+ E G V + + + H G + + E+ A + L NG
Sbjct: 235 EETYQQFLDFYEDVLPEFKNVGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAALSLFNG 294
Query: 113 RWFGKRQITAEIWDGKTKYKIA 48
RW+ RQ+ E T++K+A
Sbjct: 295 RWYAGRQLQCEFCP-VTRWKMA 315
>BC050451-1|AAH50451.2| 482|Homo sapiens zinc finger (CCCH type),
RNA-binding motif and serine/arginine rich 2 protein.
Length = 482
Score = 37.5 bits (83), Expect = 0.035
Identities = 22/82 (26%), Positives = 39/82 (47%), Gaps = 3/82 (3%)
Frame = -2
Query: 284 DKEVQLILDYQQDLREECGKCGDVRKVVL---YDRHPEGVAQITMKEPEQADAVVQLING 114
++ Q LD+ +D+ E G V + + + H G + + E+ A + L NG
Sbjct: 230 EETYQQFLDFYEDVLPEFKNVGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAALSLFNG 289
Query: 113 RWFGKRQITAEIWDGKTKYKIA 48
RW+ RQ+ E T++K+A
Sbjct: 290 RWYAGRQLQCEFCP-VTRWKMA 310
>BC039322-1|AAH39322.1| 401|Homo sapiens RBM17 protein protein.
Length = 401
Score = 37.5 bits (83), Expect = 0.035
Identities = 23/86 (26%), Positives = 49/86 (56%), Gaps = 5/86 (5%)
Frame = -2
Query: 326 RVVIVKNLFHSSDFDKEVQLILDYQQDLREECGKCGDVRKVVLYD--RHPEGVAQITMKE 153
+VV+++N+ + + D+++++ + +EEC K G V K V+++ P+ A E
Sbjct: 305 KVVLLRNMVGAGEVDEDLEV------ETKEECEKYGKVGKCVIFEIPGAPDDEAVRIFLE 358
Query: 152 PEQADAVVQLI---NGRWFGKRQITA 84
E+ ++ ++ + NGR+FG R + A
Sbjct: 359 FERVESAIKAVVDLNGRYFGGRVVKA 384
>BC009064-1|AAH09064.1| 369|Homo sapiens RBM17 protein protein.
Length = 369
Score = 37.5 bits (83), Expect = 0.035
Identities = 23/86 (26%), Positives = 49/86 (56%), Gaps = 5/86 (5%)
Frame = -2
Query: 326 RVVIVKNLFHSSDFDKEVQLILDYQQDLREECGKCGDVRKVVLYD--RHPEGVAQITMKE 153
+VV+++N+ + + D+++++ + +EEC K G V K V+++ P+ A E
Sbjct: 273 KVVLLRNMVGAGEVDEDLEV------ETKEECEKYGKVGKCVIFEIPGAPDDEAVRIFLE 326
Query: 152 PEQADAVVQLI---NGRWFGKRQITA 84
E+ ++ ++ + NGR+FG R + A
Sbjct: 327 FERVESAIKAVVDLNGRYFGGRVVKA 352
>BC007871-1|AAH07871.1| 401|Homo sapiens RNA binding motif protein
17 protein.
Length = 401
Score = 37.5 bits (83), Expect = 0.035
Identities = 23/86 (26%), Positives = 49/86 (56%), Gaps = 5/86 (5%)
Frame = -2
Query: 326 RVVIVKNLFHSSDFDKEVQLILDYQQDLREECGKCGDVRKVVLYD--RHPEGVAQITMKE 153
+VV+++N+ + + D+++++ + +EEC K G V K V+++ P+ A E
Sbjct: 305 KVVLLRNMVGAGEVDEDLEV------ETKEECEKYGKVGKCVIFEIPGAPDDEAVRIFLE 358
Query: 152 PEQADAVVQLI---NGRWFGKRQITA 84
E+ ++ ++ + NGR+FG R + A
Sbjct: 359 FERVESAIKAVVDLNGRYFGGRVVKA 384
>AL157395-8|CAH73602.1| 401|Homo sapiens RNA binding motif protein
17 protein.
Length = 401
Score = 37.5 bits (83), Expect = 0.035
Identities = 23/86 (26%), Positives = 49/86 (56%), Gaps = 5/86 (5%)
Frame = -2
Query: 326 RVVIVKNLFHSSDFDKEVQLILDYQQDLREECGKCGDVRKVVLYD--RHPEGVAQITMKE 153
+VV+++N+ + + D+++++ + +EEC K G V K V+++ P+ A E
Sbjct: 305 KVVLLRNMVGAGEVDEDLEV------ETKEECEKYGKVGKCVIFEIPGAPDDEAVRIFLE 358
Query: 152 PEQADAVVQLI---NGRWFGKRQITA 84
E+ ++ ++ + NGR+FG R + A
Sbjct: 359 FERVESAIKAVVDLNGRYFGGRVVKA 384
>AF542550-1|AAQ09533.1| 401|Homo sapiens unknown protein.
Length = 401
Score = 37.5 bits (83), Expect = 0.035
Identities = 23/86 (26%), Positives = 49/86 (56%), Gaps = 5/86 (5%)
Frame = -2
Query: 326 RVVIVKNLFHSSDFDKEVQLILDYQQDLREECGKCGDVRKVVLYD--RHPEGVAQITMKE 153
+VV+++N+ + + D+++++ + +EEC K G V K V+++ P+ A E
Sbjct: 305 KVVLLRNMVGAGEVDEDLEV------ETKEECEKYGKVGKCVIFEIPGAPDDEAVRIFLE 358
Query: 152 PEQADAVVQLI---NGRWFGKRQITA 84
E+ ++ ++ + NGR+FG R + A
Sbjct: 359 FERVESAIKAVVDLNGRYFGGRVVKA 384
>AF449428-1|AAL57515.1| 261|Homo sapiens SRrp35 protein.
Length = 261
Score = 36.7 bits (81), Expect = 0.061
Identities = 20/68 (29%), Positives = 32/68 (47%), Gaps = 4/68 (5%)
Frame = -2
Query: 251 QDLREECGKCGDVRKVVL----YDRHPEGVAQITMKEPEQADAVVQLINGRWFGKRQITA 84
+DLR E G+ G + V + Y R P G A + ++ A+ + +N +W RQI
Sbjct: 24 EDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYVQFEDVRDAEDALYNLNRKWVCGRQIEI 83
Query: 83 EIWDGKTK 60
+ G K
Sbjct: 84 QFAQGDRK 91
>BC021715-1|AAH21715.1| 261|Homo sapiens serine-arginine repressor
protein (35 kDa) protein.
Length = 261
Score = 35.9 bits (79), Expect = 0.11
Identities = 20/68 (29%), Positives = 32/68 (47%), Gaps = 4/68 (5%)
Frame = -2
Query: 251 QDLREECGKCGDVRKVVL----YDRHPEGVAQITMKEPEQADAVVQLINGRWFGKRQITA 84
+DLR E G+ G + V + Y R P G A + ++ A+ + +N +W RQI
Sbjct: 24 EDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYVQFEDVRGAEDALYNLNRKWVCGRQIEI 83
Query: 83 EIWDGKTK 60
+ G K
Sbjct: 84 QFAQGDRK 91
>BC010074-1|AAH10074.1| 173|Homo sapiens FUSIP1 protein protein.
Length = 173
Score = 35.1 bits (77), Expect = 0.19
Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 4/68 (5%)
Frame = -2
Query: 251 QDLREECGKCGDVRKVVL----YDRHPEGVAQITMKEPEQADAVVQLINGRWFGKRQITA 84
+DLR E G+ G + V + Y R P G A + ++ A+ + ++ +W RQI
Sbjct: 24 EDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALHNLDRKWICGRQIEI 83
Query: 83 EIWDGKTK 60
+ G K
Sbjct: 84 QFAQGDRK 91
>BC005039-1|AAH05039.1| 262|Homo sapiens FUS interacting protein
(serine/arginine-rich) 1 protein.
Length = 262
Score = 35.1 bits (77), Expect = 0.19
Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 4/68 (5%)
Frame = -2
Query: 251 QDLREECGKCGDVRKVVL----YDRHPEGVAQITMKEPEQADAVVQLINGRWFGKRQITA 84
+DLR E G+ G + V + Y R P G A + ++ A+ + ++ +W RQI
Sbjct: 24 EDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALHNLDRKWICGRQIEI 83
Query: 83 EIWDGKTK 60
+ G K
Sbjct: 84 QFAQGDRK 91
>BC001107-1|AAH01107.1| 183|Homo sapiens FUS interacting protein
(serine/arginine-rich) 1 protein.
Length = 183
Score = 35.1 bits (77), Expect = 0.19
Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 4/68 (5%)
Frame = -2
Query: 251 QDLREECGKCGDVRKVVL----YDRHPEGVAQITMKEPEQADAVVQLINGRWFGKRQITA 84
+DLR E G+ G + V + Y R P G A + ++ A+ + ++ +W RQI
Sbjct: 24 EDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALHNLDRKWICGRQIEI 83
Query: 83 EIWDGKTK 60
+ G K
Sbjct: 84 QFAQGDRK 91
>AY150181-1|AAN65381.1| 183|Homo sapiens splicing factor SRp38-2
protein.
Length = 183
Score = 35.1 bits (77), Expect = 0.19
Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 4/68 (5%)
Frame = -2
Query: 251 QDLREECGKCGDVRKVVL----YDRHPEGVAQITMKEPEQADAVVQLINGRWFGKRQITA 84
+DLR E G+ G + V + Y R P G A + ++ A+ + ++ +W RQI
Sbjct: 24 EDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALHNLDRKWICGRQIEI 83
Query: 83 EIWDGKTK 60
+ G K
Sbjct: 84 QFAQGDRK 91
>AY150180-1|AAN65380.1| 262|Homo sapiens splicing factor SRp38
protein.
Length = 262
Score = 35.1 bits (77), Expect = 0.19
Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 4/68 (5%)
Frame = -2
Query: 251 QDLREECGKCGDVRKVVL----YDRHPEGVAQITMKEPEQADAVVQLINGRWFGKRQITA 84
+DLR E G+ G + V + Y R P G A + ++ A+ + ++ +W RQI
Sbjct: 24 EDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALHNLDRKWICGRQIEI 83
Query: 83 EIWDGKTK 60
+ G K
Sbjct: 84 QFAQGDRK 91
>AY048592-2|AAL06099.1| 262|Homo sapiens TLS-associated SR protein
2 protein.
Length = 262
Score = 35.1 bits (77), Expect = 0.19
Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 4/68 (5%)
Frame = -2
Query: 251 QDLREECGKCGDVRKVVL----YDRHPEGVAQITMKEPEQADAVVQLINGRWFGKRQITA 84
+DLR E G+ G + V + Y R P G A + ++ A+ + ++ +W RQI
Sbjct: 24 EDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALHNLDRKWICGRQIEI 83
Query: 83 EIWDGKTK 60
+ G K
Sbjct: 84 QFAQGDRK 91
>AY048592-1|AAL06098.1| 183|Homo sapiens TLS-associated SR protein
1 protein.
Length = 183
Score = 35.1 bits (77), Expect = 0.19
Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 4/68 (5%)
Frame = -2
Query: 251 QDLREECGKCGDVRKVVL----YDRHPEGVAQITMKEPEQADAVVQLINGRWFGKRQITA 84
+DLR E G+ G + V + Y R P G A + ++ A+ + ++ +W RQI
Sbjct: 24 EDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALHNLDRKWICGRQIEI 83
Query: 83 EIWDGKTK 60
+ G K
Sbjct: 84 QFAQGDRK 91
>AL590609-10|CAI14808.1| 262|Homo sapiens FUS interacting protein
(serine/arginine-rich) 1 protein.
Length = 262
Score = 35.1 bits (77), Expect = 0.19
Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 4/68 (5%)
Frame = -2
Query: 251 QDLREECGKCGDVRKVVL----YDRHPEGVAQITMKEPEQADAVVQLINGRWFGKRQITA 84
+DLR E G+ G + V + Y R P G A + ++ A+ + ++ +W RQI
Sbjct: 24 EDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALHNLDRKWICGRQIEI 83
Query: 83 EIWDGKTK 60
+ G K
Sbjct: 84 QFAQGDRK 91
>AL590609-9|CAI14807.1| 261|Homo sapiens FUS interacting protein
(serine/arginine-rich) 1 protein.
Length = 261
Score = 35.1 bits (77), Expect = 0.19
Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 4/68 (5%)
Frame = -2
Query: 251 QDLREECGKCGDVRKVVL----YDRHPEGVAQITMKEPEQADAVVQLINGRWFGKRQITA 84
+DLR E G+ G + V + Y R P G A + ++ A+ + ++ +W RQI
Sbjct: 24 EDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALHNLDRKWICGRQIEI 83
Query: 83 EIWDGKTK 60
+ G K
Sbjct: 84 QFAQGDRK 91
>AL590609-8|CAI14805.1| 173|Homo sapiens FUS interacting protein
(serine/arginine-rich) 1 protein.
Length = 173
Score = 35.1 bits (77), Expect = 0.19
Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 4/68 (5%)
Frame = -2
Query: 251 QDLREECGKCGDVRKVVL----YDRHPEGVAQITMKEPEQADAVVQLINGRWFGKRQITA 84
+DLR E G+ G + V + Y R P G A + ++ A+ + ++ +W RQI
Sbjct: 24 EDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALHNLDRKWICGRQIEI 83
Query: 83 EIWDGKTK 60
+ G K
Sbjct: 84 QFAQGDRK 91
>AL590609-7|CAI14806.1| 172|Homo sapiens FUS interacting protein
(serine/arginine-rich) 1 protein.
Length = 172
Score = 35.1 bits (77), Expect = 0.19
Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 4/68 (5%)
Frame = -2
Query: 251 QDLREECGKCGDVRKVVL----YDRHPEGVAQITMKEPEQADAVVQLINGRWFGKRQITA 84
+DLR E G+ G + V + Y R P G A + ++ A+ + ++ +W RQI
Sbjct: 24 EDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALHNLDRKWICGRQIEI 83
Query: 83 EIWDGKTK 60
+ G K
Sbjct: 84 QFAQGDRK 91
>AL590609-6|CAI14803.1| 183|Homo sapiens FUS interacting protein
(serine/arginine-rich) 1 protein.
Length = 183
Score = 35.1 bits (77), Expect = 0.19
Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 4/68 (5%)
Frame = -2
Query: 251 QDLREECGKCGDVRKVVL----YDRHPEGVAQITMKEPEQADAVVQLINGRWFGKRQITA 84
+DLR E G+ G + V + Y R P G A + ++ A+ + ++ +W RQI
Sbjct: 24 EDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALHNLDRKWICGRQIEI 83
Query: 83 EIWDGKTK 60
+ G K
Sbjct: 84 QFAQGDRK 91
>AL590609-5|CAI14804.1| 182|Homo sapiens FUS interacting protein
(serine/arginine-rich) 1 protein.
Length = 182
Score = 35.1 bits (77), Expect = 0.19
Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 4/68 (5%)
Frame = -2
Query: 251 QDLREECGKCGDVRKVVL----YDRHPEGVAQITMKEPEQADAVVQLINGRWFGKRQITA 84
+DLR E G+ G + V + Y R P G A + ++ A+ + ++ +W RQI
Sbjct: 24 EDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALHNLDRKWICGRQIEI 83
Query: 83 EIWDGKTK 60
+ G K
Sbjct: 84 QFAQGDRK 91
>AK222994-1|BAD96714.1| 262|Homo sapiens FUS interacting protein
(serine-arginine rich) 1 isoform 2 variant protein.
Length = 262
Score = 35.1 bits (77), Expect = 0.19
Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 4/68 (5%)
Frame = -2
Query: 251 QDLREECGKCGDVRKVVL----YDRHPEGVAQITMKEPEQADAVVQLINGRWFGKRQITA 84
+DLR E G+ G + V + Y R P G A + ++ A+ + ++ +W RQI
Sbjct: 24 EDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALHNLDRKWICGRQIEI 83
Query: 83 EIWDGKTK 60
+ G K
Sbjct: 84 QFAQGDRK 91
>AK001286-1|BAA91601.1| 183|Homo sapiens protein ( Homo sapiens
cDNA FLJ10424 fis, clone NT2RP1000272, highly similar to
Homo sapiens TLS-associated protein TASR-2 mRNA. ).
Length = 183
Score = 35.1 bits (77), Expect = 0.19
Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 4/68 (5%)
Frame = -2
Query: 251 QDLREECGKCGDVRKVVL----YDRHPEGVAQITMKEPEQADAVVQLINGRWFGKRQITA 84
+DLR E G+ G + V + Y R P G A + ++ A+ + ++ +W RQI
Sbjct: 24 EDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALHNLDRKWICGRQIEI 83
Query: 83 EIWDGKTK 60
+ G K
Sbjct: 84 QFAQGDRK 91
>AF449427-1|AAL57514.1| 262|Homo sapiens SRrp40 protein.
Length = 262
Score = 35.1 bits (77), Expect = 0.19
Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 4/68 (5%)
Frame = -2
Query: 251 QDLREECGKCGDVRKVVL----YDRHPEGVAQITMKEPEQADAVVQLINGRWFGKRQITA 84
+DLR E G+ G + V + Y R P G A + ++ A+ + ++ +W RQI
Sbjct: 24 EDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALHNLDRKWICGRQIEI 83
Query: 83 EIWDGKTK 60
+ G K
Sbjct: 84 QFAQGDRK 91
>AF419332-1|AAL16666.1| 261|Homo sapiens TLS-associated protein
TASR-2 protein.
Length = 261
Score = 35.1 bits (77), Expect = 0.19
Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 4/68 (5%)
Frame = -2
Query: 251 QDLREECGKCGDVRKVVL----YDRHPEGVAQITMKEPEQADAVVQLINGRWFGKRQITA 84
+DLR E G+ G + V + Y R P G A + ++ A+ + ++ +W RQI
Sbjct: 24 EDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALHNLDRKWICGRQIEI 83
Query: 83 EIWDGKTK 60
+ G K
Sbjct: 84 QFAQGDRK 91
>AF419331-1|AAL16665.1| 183|Homo sapiens TLS-associated protein
TASR-1 protein.
Length = 183
Score = 35.1 bits (77), Expect = 0.19
Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 4/68 (5%)
Frame = -2
Query: 251 QDLREECGKCGDVRKVVL----YDRHPEGVAQITMKEPEQADAVVQLINGRWFGKRQITA 84
+DLR E G+ G + V + Y R P G A + ++ A+ + ++ +W RQI
Sbjct: 24 EDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALHNLDRKWICGRQIEI 83
Query: 83 EIWDGKTK 60
+ G K
Sbjct: 84 QFAQGDRK 91
>AF067730-1|AAC26727.1| 262|Homo sapiens TLS-associated protein
TASR-2 protein.
Length = 262
Score = 35.1 bits (77), Expect = 0.19
Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 4/68 (5%)
Frame = -2
Query: 251 QDLREECGKCGDVRKVVL----YDRHPEGVAQITMKEPEQADAVVQLINGRWFGKRQITA 84
+DLR E G+ G + V + Y R P G A + ++ A+ + ++ +W RQI
Sbjct: 24 EDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALHNLDRKWICGRQIEI 83
Query: 83 EIWDGKTK 60
+ G K
Sbjct: 84 QFAQGDRK 91
>AF047448-1|AAC70918.1| 183|Homo sapiens TLS-associated protein
TASR protein.
Length = 183
Score = 35.1 bits (77), Expect = 0.19
Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 4/68 (5%)
Frame = -2
Query: 251 QDLREECGKCGDVRKVVL----YDRHPEGVAQITMKEPEQADAVVQLINGRWFGKRQITA 84
+DLR E G+ G + V + Y R P G A + ++ A+ + ++ +W RQI
Sbjct: 24 EDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALHNLDRKWICGRQIEI 83
Query: 83 EIWDGKTK 60
+ G K
Sbjct: 84 QFAQGDRK 91
>AK074860-1|BAC11252.1| 180|Homo sapiens protein ( Homo sapiens
cDNA FLJ90379 fis, clone NT2RP2004932, highly similar to
Homo sapiens SCG10-like-protein (SCLIP) mRNA. ).
Length = 180
Score = 34.3 bits (75), Expect = 0.33
Identities = 15/41 (36%), Positives = 27/41 (65%)
Frame = -2
Query: 356 KFIGERSKHERVVIVKNLFHSSDFDKEVQLILDYQQDLREE 234
K + ER +HER V+ K L ++DF ++ + L+Y+ +L +E
Sbjct: 105 KQLAERREHEREVLHKALEENNDFSRQAEEKLNYKMELSKE 145
>BC025234-1|AAH25234.1| 180|Homo sapiens STMN3 protein protein.
Length = 180
Score = 32.3 bits (70), Expect = 1.3
Identities = 14/41 (34%), Positives = 27/41 (65%)
Frame = -2
Query: 356 KFIGERSKHERVVIVKNLFHSSDFDKEVQLILDYQQDLREE 234
K + ER +HER V+ K L +++F ++ + L+Y+ +L +E
Sbjct: 105 KQLAERREHEREVLHKALEENNNFSRQAEEKLNYKMELSKE 145
>BC009381-1|AAH09381.1| 180|Homo sapiens STMN3 protein protein.
Length = 180
Score = 32.3 bits (70), Expect = 1.3
Identities = 14/41 (34%), Positives = 27/41 (65%)
Frame = -2
Query: 356 KFIGERSKHERVVIVKNLFHSSDFDKEVQLILDYQQDLREE 234
K + ER +HER V+ K L +++F ++ + L+Y+ +L +E
Sbjct: 105 KQLAERREHEREVLHKALEENNNFSRQAEEKLNYKMELSKE 145
>AL353715-3|CAC16222.1| 180|Homo sapiens stathmin-like 3 protein.
Length = 180
Score = 32.3 bits (70), Expect = 1.3
Identities = 14/41 (34%), Positives = 27/41 (65%)
Frame = -2
Query: 356 KFIGERSKHERVVIVKNLFHSSDFDKEVQLILDYQQDLREE 234
K + ER +HER V+ K L +++F ++ + L+Y+ +L +E
Sbjct: 105 KQLAERREHEREVLHKALEENNNFSRQAEEKLNYKMELSKE 145
>AF217796-1|AAF35245.1| 180|Homo sapiens SCG10 like-protein
protein.
Length = 180
Score = 32.3 bits (70), Expect = 1.3
Identities = 14/41 (34%), Positives = 27/41 (65%)
Frame = -2
Query: 356 KFIGERSKHERVVIVKNLFHSSDFDKEVQLILDYQQDLREE 234
K + ER +HER V+ K L +++F ++ + L+Y+ +L +E
Sbjct: 105 KQLAERREHEREVLHKALEENNNFSRQAEEKLNYKMELSKE 145
>AF069709-1|AAD12730.1| 180|Homo sapiens SCG10-like-protein
protein.
Length = 180
Score = 32.3 bits (70), Expect = 1.3
Identities = 14/41 (34%), Positives = 27/41 (65%)
Frame = -2
Query: 356 KFIGERSKHERVVIVKNLFHSSDFDKEVQLILDYQQDLREE 234
K + ER +HER V+ K L +++F ++ + L+Y+ +L +E
Sbjct: 105 KQLAERREHEREVLHKALEENNNFSRQAEEKLNYKMELSKE 145
>U75686-1|AAB97309.1| 644|Homo sapiens polyadenylate binding
protein protein.
Length = 644
Score = 31.5 bits (68), Expect = 2.3
Identities = 21/76 (27%), Positives = 34/76 (44%), Gaps = 2/76 (2%)
Frame = -2
Query: 251 QDLREECGKCGDVR--KVVLYDRHPEGVAQITMKEPEQADAVVQLINGRWFGKRQITAEI 78
+ LR+E G + KV+L D +G + PE+A V +NGR G + + +
Sbjct: 308 EKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVAL 367
Query: 77 WDGKTKYKIAETDADM 30
K + K T+ M
Sbjct: 368 AQRKEERKAHLTNQYM 383
>U33818-1|AAC50350.1| 644|Homo sapiens inducible poly(A)-binding
protein protein.
Length = 644
Score = 31.5 bits (68), Expect = 2.3
Identities = 21/76 (27%), Positives = 34/76 (44%), Gaps = 2/76 (2%)
Frame = -2
Query: 251 QDLREECGKCGDVR--KVVLYDRHPEGVAQITMKEPEQADAVVQLINGRWFGKRQITAEI 78
+ LR+E G + KV+L D +G + PE+A V +NGR G + + +
Sbjct: 308 EKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVAL 367
Query: 77 WDGKTKYKIAETDADM 30
K + K T+ M
Sbjct: 368 AQRKEERKAHLTNQYM 383
>D12799-1|BAA02244.1| 193|Homo sapiens polyadenylate binding
protein II protein.
Length = 193
Score = 31.5 bits (68), Expect = 2.3
Identities = 20/75 (26%), Positives = 34/75 (45%), Gaps = 2/75 (2%)
Frame = -2
Query: 251 QDLREECGKCGDVR--KVVLYDRHPEGVAQITMKEPEQADAVVQLINGRWFGKRQITAEI 78
+ LR+E G + KV+L D +G + PE+A V +NGR G + + +
Sbjct: 119 EKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVAL 178
Query: 77 WDGKTKYKIAETDAD 33
K + K T+ +
Sbjct: 179 AQRKEERKAHLTNPE 193
>BC118568-1|AAI18569.1| 252|Homo sapiens PABPC4 protein protein.
Length = 252
Score = 31.5 bits (68), Expect = 2.3
Identities = 21/76 (27%), Positives = 34/76 (44%), Gaps = 2/76 (2%)
Frame = -2
Query: 251 QDLREECGKCGDVR--KVVLYDRHPEGVAQITMKEPEQADAVVQLINGRWFGKRQITAEI 78
+ LR+E G + KV+L D +G + PE+A V +NGR G + + +
Sbjct: 58 EKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVAL 117
Query: 77 WDGKTKYKIAETDADM 30
K + K T+ M
Sbjct: 118 AQRKEERKAHLTNQYM 133
>BC106908-1|AAI06909.1| 281|Homo sapiens PABPC4 protein protein.
Length = 281
Score = 31.5 bits (68), Expect = 2.3
Identities = 21/76 (27%), Positives = 34/76 (44%), Gaps = 2/76 (2%)
Frame = -2
Query: 251 QDLREECGKCGDVR--KVVLYDRHPEGVAQITMKEPEQADAVVQLINGRWFGKRQITAEI 78
+ LR+E G + KV+L D +G + PE+A V +NGR G + + +
Sbjct: 58 EKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVAL 117
Query: 77 WDGKTKYKIAETDADM 30
K + K T+ M
Sbjct: 118 AQRKEERKAHLTNQYM 133
>BC094755-1|AAH94755.1| 660|Homo sapiens PABPC4 protein protein.
Length = 660
Score = 31.5 bits (68), Expect = 2.3
Identities = 21/76 (27%), Positives = 34/76 (44%), Gaps = 2/76 (2%)
Frame = -2
Query: 251 QDLREECGKCGDVR--KVVLYDRHPEGVAQITMKEPEQADAVVQLINGRWFGKRQITAEI 78
+ LR+E G + KV+L D +G + PE+A V +NGR G + + +
Sbjct: 308 EKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVAL 367
Query: 77 WDGKTKYKIAETDADM 30
K + K T+ M
Sbjct: 368 AQRKEERKAHLTNQYM 383
>BC071591-1|AAH71591.1| 660|Homo sapiens PABPC4 protein protein.
Length = 660
Score = 31.5 bits (68), Expect = 2.3
Identities = 21/76 (27%), Positives = 34/76 (44%), Gaps = 2/76 (2%)
Frame = -2
Query: 251 QDLREECGKCGDVR--KVVLYDRHPEGVAQITMKEPEQADAVVQLINGRWFGKRQITAEI 78
+ LR+E G + KV+L D +G + PE+A V +NGR G + + +
Sbjct: 308 EKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVAL 367
Query: 77 WDGKTKYKIAETDADM 30
K + K T+ M
Sbjct: 368 AQRKEERKAHLTNQYM 383
>BC065540-1|AAH65540.1| 631|Homo sapiens PABPC4 protein protein.
Length = 631
Score = 31.5 bits (68), Expect = 2.3
Identities = 21/76 (27%), Positives = 34/76 (44%), Gaps = 2/76 (2%)
Frame = -2
Query: 251 QDLREECGKCGDVR--KVVLYDRHPEGVAQITMKEPEQADAVVQLINGRWFGKRQITAEI 78
+ LR+E G + KV+L D +G + PE+A V +NGR G + + +
Sbjct: 308 EKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVAL 367
Query: 77 WDGKTKYKIAETDADM 30
K + K T+ M
Sbjct: 368 AQRKEERKAHLTNQYM 383
>AL845289-3|CAI12300.1| 644|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (inducibletaining 6 protein.
Length = 644
Score = 31.5 bits (68), Expect = 2.3
Identities = 21/76 (27%), Positives = 34/76 (44%), Gaps = 2/76 (2%)
Frame = -2
Query: 251 QDLREECGKCGDVR--KVVLYDRHPEGVAQITMKEPEQADAVVQLINGRWFGKRQITAEI 78
+ LR+E G + KV+L D +G + PE+A V +NGR G + + +
Sbjct: 308 EKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVAL 367
Query: 77 WDGKTKYKIAETDADM 30
K + K T+ M
Sbjct: 368 AQRKEERKAHLTNQYM 383
>AL845289-2|CAI12298.1| 660|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (inducibleseudogene protein.
Length = 660
Score = 31.5 bits (68), Expect = 2.3
Identities = 21/76 (27%), Positives = 34/76 (44%), Gaps = 2/76 (2%)
Frame = -2
Query: 251 QDLREECGKCGDVR--KVVLYDRHPEGVAQITMKEPEQADAVVQLINGRWFGKRQITAEI 78
+ LR+E G + KV+L D +G + PE+A V +NGR G + + +
Sbjct: 308 EKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVAL 367
Query: 77 WDGKTKYKIAETDADM 30
K + K T+ M
Sbjct: 368 AQRKEERKAHLTNQYM 383
>AL845289-1|CAI12299.1| 615|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (inducibleeudogene protein.
Length = 615
Score = 31.5 bits (68), Expect = 2.3
Identities = 21/76 (27%), Positives = 34/76 (44%), Gaps = 2/76 (2%)
Frame = -2
Query: 251 QDLREECGKCGDVR--KVVLYDRHPEGVAQITMKEPEQADAVVQLINGRWFGKRQITAEI 78
+ LR+E G + KV+L D +G + PE+A V +NGR G + + +
Sbjct: 308 EKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVAL 367
Query: 77 WDGKTKYKIAETDADM 30
K + K T+ M
Sbjct: 368 AQRKEERKAHLTNQYM 383
>AL365277-15|CAI16425.1| 410|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (induciblela) protein.
Length = 410
Score = 31.5 bits (68), Expect = 2.3
Identities = 21/76 (27%), Positives = 34/76 (44%), Gaps = 2/76 (2%)
Frame = -2
Query: 251 QDLREECGKCGDVR--KVVLYDRHPEGVAQITMKEPEQADAVVQLINGRWFGKRQITAEI 78
+ LR+E G + KV+L D +G + PE+A V +NGR G + + +
Sbjct: 87 EKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVAL 146
Query: 77 WDGKTKYKIAETDADM 30
K + K T+ M
Sbjct: 147 AQRKEERKAHLTNQYM 162
>AL365277-4|CAI16414.1| 644|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (induciblepeptide, antigen CD29 includes
protein.
Length = 644
Score = 31.5 bits (68), Expect = 2.3
Identities = 21/76 (27%), Positives = 34/76 (44%), Gaps = 2/76 (2%)
Frame = -2
Query: 251 QDLREECGKCGDVR--KVVLYDRHPEGVAQITMKEPEQADAVVQLINGRWFGKRQITAEI 78
+ LR+E G + KV+L D +G + PE+A V +NGR G + + +
Sbjct: 308 EKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVAL 367
Query: 77 WDGKTKYKIAETDADM 30
K + K T+ M
Sbjct: 368 AQRKEERKAHLTNQYM 383
>AL365277-3|CAI16412.1| 660|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (inducible) pseudogene protein.
Length = 660
Score = 31.5 bits (68), Expect = 2.3
Identities = 21/76 (27%), Positives = 34/76 (44%), Gaps = 2/76 (2%)
Frame = -2
Query: 251 QDLREECGKCGDVR--KVVLYDRHPEGVAQITMKEPEQADAVVQLINGRWFGKRQITAEI 78
+ LR+E G + KV+L D +G + PE+A V +NGR G + + +
Sbjct: 308 EKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVAL 367
Query: 77 WDGKTKYKIAETDADM 30
K + K T+ M
Sbjct: 368 AQRKEERKAHLTNQYM 383
>AL365277-2|CAI16413.1| 615|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (induciblely, member 5 protein.
Length = 615
Score = 31.5 bits (68), Expect = 2.3
Identities = 21/76 (27%), Positives = 34/76 (44%), Gaps = 2/76 (2%)
Frame = -2
Query: 251 QDLREECGKCGDVR--KVVLYDRHPEGVAQITMKEPEQADAVVQLINGRWFGKRQITAEI 78
+ LR+E G + KV+L D +G + PE+A V +NGR G + + +
Sbjct: 308 EKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVAL 367
Query: 77 WDGKTKYKIAETDADM 30
K + K T+ M
Sbjct: 368 AQRKEERKAHLTNQYM 383
>AK222917-1|BAD96637.1| 371|Homo sapiens PABPC4 protein variant
protein.
Length = 371
Score = 31.5 bits (68), Expect = 2.3
Identities = 21/76 (27%), Positives = 34/76 (44%), Gaps = 2/76 (2%)
Frame = -2
Query: 251 QDLREECGKCGDVR--KVVLYDRHPEGVAQITMKEPEQADAVVQLINGRWFGKRQITAEI 78
+ LR+E G + KV+L D +G + PE+A V +NGR G + + +
Sbjct: 19 EKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVAL 78
Query: 77 WDGKTKYKIAETDADM 30
K + K T+ M
Sbjct: 79 AQRKEERKAHLTNQYM 94
>AK127552-1|BAC87031.1| 357|Homo sapiens protein ( Homo sapiens
cDNA FLJ45645 fis, clone CTONG2003517. ).
Length = 357
Score = 31.5 bits (68), Expect = 2.3
Identities = 25/92 (27%), Positives = 43/92 (46%), Gaps = 1/92 (1%)
Frame = -2
Query: 350 IGERSKHERVVIVKNLFHSSDFDKEVQ-LILDYQQDLREECGKCGDVRKVVLYDRHPEGV 174
+ E ER V+V L D+ + L+ + QD++ E G DV +Y +GV
Sbjct: 7 VKESKAPERTVVVAGLPVDLFSDQLLAVLVKSHFQDIKNEGGDVEDV----IYPTRTKGV 62
Query: 173 AQITMKEPEQADAVVQLINGRWFGKRQITAEI 78
A + KE + A+ V++ W ++ AE+
Sbjct: 63 AYVIFKEKKVAENVIRQ-KKHWLARKTRHAEL 93
>AB208962-1|BAD92199.1| 358|Homo sapiens PABPC4 protein variant
protein.
Length = 358
Score = 31.5 bits (68), Expect = 2.3
Identities = 21/76 (27%), Positives = 34/76 (44%), Gaps = 2/76 (2%)
Frame = -2
Query: 251 QDLREECGKCGDVR--KVVLYDRHPEGVAQITMKEPEQADAVVQLINGRWFGKRQITAEI 78
+ LR+E G + KV+L D +G + PE+A V +NGR G + + +
Sbjct: 6 EKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVAL 65
Query: 77 WDGKTKYKIAETDADM 30
K + K T+ M
Sbjct: 66 AQRKEERKAHLTNQYM 81
>BC014917-1|AAH14917.1| 314|Homo sapiens UHMK1 protein protein.
Length = 314
Score = 30.3 bits (65), Expect = 5.3
Identities = 18/64 (28%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Frame = -2
Query: 260 DYQQDLREECGKCGDVRKVVLYDRHPEGVAQITMKEPEQAD--AVVQLINGRWFGKRQIT 87
D +D++EEC K G V +++ +P G Q+ ++ D A +L+ GR F + +
Sbjct: 237 DVVEDVKEECQKYGPVVSLLVPKENP-GRGQVFVEYANAGDSKAAQKLLTGRMFDGKFVV 295
Query: 86 AEIW 75
A +
Sbjct: 296 ATFY 299
>AL359699-2|CAH70392.1| 419|Homo sapiens U2AF homology motif (UHM)
kinase 1 protein.
Length = 419
Score = 30.3 bits (65), Expect = 5.3
Identities = 18/64 (28%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Frame = -2
Query: 260 DYQQDLREECGKCGDVRKVVLYDRHPEGVAQITMKEPEQAD--AVVQLINGRWFGKRQIT 87
D +D++EEC K G V +++ +P G Q+ ++ D A +L+ GR F + +
Sbjct: 342 DVVEDVKEECQKYGPVVSLLVPKENP-GRGQVFVEYANAGDSKAAQKLLTGRMFDGKFVV 400
Query: 86 AEIW 75
A +
Sbjct: 401 ATFY 404
>AJ536197-1|CAD60192.1| 419|Homo sapiens KIS protein protein.
Length = 419
Score = 30.3 bits (65), Expect = 5.3
Identities = 18/64 (28%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Frame = -2
Query: 260 DYQQDLREECGKCGDVRKVVLYDRHPEGVAQITMKEPEQAD--AVVQLINGRWFGKRQIT 87
D +D++EEC K G V +++ +P G Q+ ++ D A +L+ GR F + +
Sbjct: 342 DVVEDVKEECQKYGPVVSLLVPKENP-GRGQVFVEYANAGDSKAAQKLLTGRMFDGKFVV 400
Query: 86 AEIW 75
A +
Sbjct: 401 ATFY 404
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 71,634,184
Number of Sequences: 237096
Number of extensions: 1279110
Number of successful extensions: 2615
Number of sequences better than 10.0: 86
Number of HSP's better than 10.0 without gapping: 2513
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2591
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6211568660
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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