Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_pT_D15
         (725 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC024810-4|AAF60758.2|  194|Caenorhabditis elegans Hypothetical ...    82   5e-16
Z70203-1|CAA94104.1|  456|Caenorhabditis elegans Hypothetical pr...    28   5.9  
Z92831-5|CAJ58498.1|  247|Caenorhabditis elegans Hypothetical pr...    23   9.3  

>AC024810-4|AAF60758.2|  194|Caenorhabditis elegans Hypothetical
           protein Y54E10A.7 protein.
          Length = 194

 Score = 81.8 bits (193), Expect = 5e-16
 Identities = 50/147 (34%), Positives = 79/147 (53%), Gaps = 10/147 (6%)
 Frame = -1

Query: 557 RIDKLRKTVTGLIKFERIELNINRGDEARQYAERLISEAIRHGDCHKPTMDMANFWLLEK 378
           R++ LR+ VT  ++ ER EL  NR  EAR Y ERLI   +  G   + T +M  +WL EK
Sbjct: 36  RLEVLRRIVTRTVREERAELKWNRAVEARPYLERLIQLGVERGPLDEYTAEMMEWWLPEK 95

Query: 377 QLVHKLFKVLVPRFENSTVSYTKMIKAPK------AQNTEHTNKI----VLELRGNPYPD 228
            L+ K+ +V+VPRF++    +T + + P        QN     K     VLE+ GNP+P 
Sbjct: 96  DLITKMHEVIVPRFQDRDSPFTSLFRLPPQRLQQFIQNKREVWKRYDIGVLEIDGNPFPQ 155

Query: 227 LIVKQPNNRLWIQNVLLDAAKYDYRQS 147
           +   + +    I +VLL  A  +++++
Sbjct: 156 IQADRVDQSESILDVLLADALRNHQKN 182


>Z70203-1|CAA94104.1|  456|Caenorhabditis elegans Hypothetical
           protein C05G5.1 protein.
          Length = 456

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 5/48 (10%)
 Frame = +1

Query: 457 LSAYWRASSPRLIFNSILSNFINPVTVLRNLSILP-----SGPLRFFN 585
           L+AYW A + R I N+ LS+  NP+ +    S+ P     + P  FFN
Sbjct: 137 LAAYWFADNERAIANT-LSSMSNPIGIAVMYSLAPVFVNKTTPDNFFN 183


>Z92831-5|CAJ58498.1|  247|Caenorhabditis elegans Hypothetical
           protein F22G12.8 protein.
          Length = 247

 Score = 23.4 bits (48), Expect(2) = 9.3
 Identities = 12/39 (30%), Positives = 21/39 (53%)
 Frame = -1

Query: 563 EGRIDKLRKTVTGLIKFERIELNINRGDEARQYAERLIS 447
           +  +D L +T  G++K   IEL IN+  +  +  E  +S
Sbjct: 67  KSELDNLVETTEGIMKSNGIELIINKEIDQTKIREIALS 105



 Score = 22.6 bits (46), Expect(2) = 9.3
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = -1

Query: 410 MDMANFWLLEKQLVHKLFKVLVPRF 336
           MD A  WL E  + +K  KVL+  F
Sbjct: 146 MDYAKDWLDEHMICYKEEKVLLATF 170


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,610,004
Number of Sequences: 27780
Number of extensions: 291775
Number of successful extensions: 746
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 715
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 745
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1708383636
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)