Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_pT_D12
         (334 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M17886-1|AAA36471.1|  114|Homo sapiens protein ( Human acidic ri...    77   2e-14
BC007590-1|AAH07590.1|  114|Homo sapiens ribosomal protein, larg...    77   2e-14
BC003369-1|AAH03369.1|  114|Homo sapiens ribosomal protein, larg...    77   2e-14
AY303789-1|AAP68820.1|  113|Homo sapiens acidic ribosomal phosph...    77   2e-14
AB061836-1|BAB79474.1|  114|Homo sapiens ribosomal protein P1 pr...    77   2e-14
CR450339-1|CAG29335.1|  114|Homo sapiens RPLP1 protein.                76   2e-14
CR542209-1|CAG47005.1|  114|Homo sapiens RPLP1 protein.                72   5e-13
AJ417067-1|CAD01135.1| 1286|Homo sapiens RPGR-interacting protei...    28   6.0  
AJ417048-1|CAD01136.1| 1286|Homo sapiens RPGR-interacting protei...    28   6.0  
L07758-1|AAA65201.1|  501|Homo sapiens IEF SSP 9502 protein.           28   7.9  
BC001652-1|AAH01652.1|  501|Homo sapiens PWP1 homolog (S. cerevi...    28   7.9  
AK223162-1|BAD96882.1|  501|Homo sapiens nuclear phosphoprotein ...    28   7.9  

>M17886-1|AAA36471.1|  114|Homo sapiens protein ( Human acidic
           ribosomal phosphoprotein P1 mRNA, complete cds. ).
          Length = 114

 Score = 76.6 bits (180), Expect = 2e-14
 Identities = 34/51 (66%), Positives = 43/51 (84%)
 Frame = -1

Query: 244 MVSKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKDL 92
           M S +ELAC+YSALIL DD+V VT +KI+ ++KAA V+VEP+WPGLFAK L
Sbjct: 1   MASVSELACIYSALILHDDEVTVTEDKINALIKAAGVNVEPFWPGLFAKAL 51


>BC007590-1|AAH07590.1|  114|Homo sapiens ribosomal protein, large,
           P1 protein.
          Length = 114

 Score = 76.6 bits (180), Expect = 2e-14
 Identities = 34/51 (66%), Positives = 43/51 (84%)
 Frame = -1

Query: 244 MVSKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKDL 92
           M S +ELAC+YSALIL DD+V VT +KI+ ++KAA V+VEP+WPGLFAK L
Sbjct: 1   MASVSELACIYSALILHDDEVTVTEDKINALIKAAGVNVEPFWPGLFAKAL 51


>BC003369-1|AAH03369.1|  114|Homo sapiens ribosomal protein, large,
           P1 protein.
          Length = 114

 Score = 76.6 bits (180), Expect = 2e-14
 Identities = 34/51 (66%), Positives = 43/51 (84%)
 Frame = -1

Query: 244 MVSKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKDL 92
           M S +ELAC+YSALIL DD+V VT +KI+ ++KAA V+VEP+WPGLFAK L
Sbjct: 1   MASVSELACIYSALILHDDEVTVTEDKINALIKAAGVNVEPFWPGLFAKAL 51


>AY303789-1|AAP68820.1|  113|Homo sapiens acidic ribosomal
           phosphoprotein P1 protein.
          Length = 113

 Score = 76.6 bits (180), Expect = 2e-14
 Identities = 34/51 (66%), Positives = 43/51 (84%)
 Frame = -1

Query: 244 MVSKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKDL 92
           M S +ELAC+YSALIL DD+V VT +KI+ ++KAA V+VEP+WPGLFAK L
Sbjct: 1   MASVSELACIYSALILHDDEVTVTEDKINALIKAAGVNVEPFWPGLFAKAL 51


>AB061836-1|BAB79474.1|  114|Homo sapiens ribosomal protein P1
           protein.
          Length = 114

 Score = 76.6 bits (180), Expect = 2e-14
 Identities = 34/51 (66%), Positives = 43/51 (84%)
 Frame = -1

Query: 244 MVSKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKDL 92
           M S +ELAC+YSALIL DD+V VT +KI+ ++KAA V+VEP+WPGLFAK L
Sbjct: 1   MASVSELACIYSALILHDDEVTVTEDKINALIKAAGVNVEPFWPGLFAKAL 51


>CR450339-1|CAG29335.1|  114|Homo sapiens RPLP1 protein.
          Length = 114

 Score = 76.2 bits (179), Expect = 2e-14
 Identities = 33/51 (64%), Positives = 43/51 (84%)
 Frame = -1

Query: 244 MVSKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKDL 92
           M S +ELAC+YSAL+L DD+V VT +KI+ ++KAA V+VEP+WPGLFAK L
Sbjct: 1   MASVSELACIYSALVLHDDEVTVTEDKINALIKAAGVNVEPFWPGLFAKAL 51


>CR542209-1|CAG47005.1|  114|Homo sapiens RPLP1 protein.
          Length = 114

 Score = 71.7 bits (168), Expect = 5e-13
 Identities = 33/51 (64%), Positives = 42/51 (82%)
 Frame = -1

Query: 244 MVSKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKDL 92
           M S +ELA +YSALIL DD+V VT +KI+ ++KAA V+VEP+WPGLFAK L
Sbjct: 1   MASVSELARIYSALILHDDEVTVTEDKINALIKAAGVNVEPFWPGLFAKAL 51


>AJ417067-1|CAD01135.1| 1286|Homo sapiens RPGR-interacting protein 1
           protein.
          Length = 1286

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 10/16 (62%), Positives = 14/16 (87%)
 Frame = +3

Query: 3   QQRLALHQRPEQHPLQ 50
           +QRL++HQRP+ H LQ
Sbjct: 110 RQRLSMHQRPQMHRLQ 125


>AJ417048-1|CAD01136.1| 1286|Homo sapiens RPGR-interacting protein 1
           protein.
          Length = 1286

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 10/16 (62%), Positives = 14/16 (87%)
 Frame = +3

Query: 3   QQRLALHQRPEQHPLQ 50
           +QRL++HQRP+ H LQ
Sbjct: 110 RQRLSMHQRPQMHRLQ 125


>L07758-1|AAA65201.1|  501|Homo sapiens IEF SSP 9502 protein.
          Length = 501

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 13/46 (28%), Positives = 23/46 (50%)
 Frame = -1

Query: 184 VAVTGEKISTILKAAAVDVEPYWPGLFAKDLGRHQCP*PDHQHRLW 47
           +AV  +K+ T L+    + +    G + K +  + C  PD  HR+W
Sbjct: 295 LAVHTDKVQT-LQFHPFEAQTLISGSYDKSVALYDCRSPDESHRMW 339


>BC001652-1|AAH01652.1|  501|Homo sapiens PWP1 homolog (S.
           cerevisiae) protein.
          Length = 501

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 13/46 (28%), Positives = 23/46 (50%)
 Frame = -1

Query: 184 VAVTGEKISTILKAAAVDVEPYWPGLFAKDLGRHQCP*PDHQHRLW 47
           +AV  +K+ T L+    + +    G + K +  + C  PD  HR+W
Sbjct: 295 LAVHTDKVQT-LQFHPFEAQTLISGSYDKSVALYDCRSPDESHRMW 339


>AK223162-1|BAD96882.1|  501|Homo sapiens nuclear phosphoprotein
           similar to S. cerevisiae PWP1 variant protein.
          Length = 501

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 13/46 (28%), Positives = 23/46 (50%)
 Frame = -1

Query: 184 VAVTGEKISTILKAAAVDVEPYWPGLFAKDLGRHQCP*PDHQHRLW 47
           +AV  +K+ T L+    + +    G + K +  + C  PD  HR+W
Sbjct: 295 LAVHTDKVQT-LQFHPFEAQTLISGSYDKSVALYDCRSPDESHRMW 339


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 50,231,948
Number of Sequences: 237096
Number of extensions: 1026482
Number of successful extensions: 1667
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1602
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1667
length of database: 76,859,062
effective HSP length: 80
effective length of database: 57,891,382
effective search space used: 1736741460
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)