Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_pT_D07
         (753 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q5CKL0 Cluster: Serine/threonine-protein kinase Nek1; n...    35   2.5  
UniRef50_Q8IC23 Cluster: Putative uncharacterized protein PF07_0...    33   7.6  

>UniRef50_Q5CKL0 Cluster: Serine/threonine-protein kinase Nek1; n=2;
           Cryptosporidium|Rep: Serine/threonine-protein kinase
           Nek1 - Cryptosporidium hominis
          Length = 533

 Score = 34.7 bits (76), Expect = 2.5
 Identities = 20/53 (37%), Positives = 29/53 (54%)
 Frame = -2

Query: 467 KTW*NSQYCLKQ*RKFHFNLRNKKCFINLSNIPNKLKKVVNSFCVYVKYFLKQ 309
           K W       K+   F++N  NKK  IN+S IP  +K+ V++     K+FLKQ
Sbjct: 301 KHWSQFNSICKELSTFNYNSVNKKNHINISRIPFWIKQDVDTENKSSKFFLKQ 353


>UniRef50_Q8IC23 Cluster: Putative uncharacterized protein
           PF07_0018; n=1; Plasmodium falciparum 3D7|Rep: Putative
           uncharacterized protein PF07_0018 - Plasmodium
           falciparum (isolate 3D7)
          Length = 1337

 Score = 33.1 bits (72), Expect = 7.6
 Identities = 17/37 (45%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
 Frame = -2

Query: 413 NLRN-KKCFINLSNIPNKLKKVVNSFCVYVKYFLKQC 306
           NLRN +KC        N L K VN F  Y+KYF++ C
Sbjct: 654 NLRNGEKCSSTCVRKENYLLKQVNKFYKYLKYFIEAC 690


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 602,331,294
Number of Sequences: 1657284
Number of extensions: 10696909
Number of successful extensions: 22975
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 22099
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22974
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 62146450145
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)