Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_pT_D06
         (655 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory recept...    23   2.9  
AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory recept...    23   2.9  
AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory recept...    23   2.9  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    22   3.8  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    22   3.8  
AY563109-1|AAS99587.1|   46|Tribolium castaneum aristaless protein.    21   6.7  
AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain tran...    21   6.7  
AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.          21   6.7  

>AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory receptor
           candidate 47 protein.
          Length = 387

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 15/44 (34%), Positives = 19/44 (43%)
 Frame = +2

Query: 371 VPFEATSHALLSGVN*FATFRALRVISGFERHCARLTYPVRRVG 502
           V F  T  ALL G   + T   L +I+    +CA      R VG
Sbjct: 141 VVFLLTLSALLEGFTLYHTTAYLHIITMINMNCALWYINCRAVG 184


>AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory receptor
           candidate 26 protein.
          Length = 387

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 15/44 (34%), Positives = 19/44 (43%)
 Frame = +2

Query: 371 VPFEATSHALLSGVN*FATFRALRVISGFERHCARLTYPVRRVG 502
           V F  T  ALL G   + T   L +I+    +CA      R VG
Sbjct: 141 VVFLLTLSALLEGFTLYHTTAYLHIITMINMNCALWYINCRAVG 184


>AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory receptor
           candidate 6 protein.
          Length = 387

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 15/44 (34%), Positives = 19/44 (43%)
 Frame = +2

Query: 371 VPFEATSHALLSGVN*FATFRALRVISGFERHCARLTYPVRRVG 502
           V F  T  ALL G   + T   L +I+    +CA      R VG
Sbjct: 141 VVFLLTLSALLEGFTLYHTTAYLHIITMINMNCALWYINCRAVG 184


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = -2

Query: 81  TLVRIIYSLSLNLFCLSVYYLLI 13
           TLV +IY+ +L   C   Y+LL+
Sbjct: 312 TLV-VIYTFNLFYLCFCFYWLLV 333


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = -2

Query: 81  TLVRIIYSLSLNLFCLSVYYLLI 13
           TLV +IY+ +L   C   Y+LL+
Sbjct: 268 TLV-VIYTFNLFYLCFCFYWLLV 289


>AY563109-1|AAS99587.1|   46|Tribolium castaneum aristaless protein.
          Length = 46

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 10/28 (35%), Positives = 14/28 (50%)
 Frame = -3

Query: 572 ELRAQQSRHHRPELYTRPGARLSFRLDE 489
           EL    SR H P+++TR    +   L E
Sbjct: 11  ELEKAFSRTHYPDVFTREELAMKIGLTE 38


>AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain
           transcription factor Zen2 protein.
          Length = 243

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = -3

Query: 575 FELRAQQSRHHRPELYTRPGA 513
           FE+   ++R H PE+    GA
Sbjct: 62  FEVSLSENRSHEPEMERPKGA 82


>AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.
          Length = 292

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = -3

Query: 575 FELRAQQSRHHRPELYTRPGA 513
           FE+   ++R H PE+    GA
Sbjct: 82  FEVSLSENRSHEPEMERPKGA 102


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 139,859
Number of Sequences: 336
Number of extensions: 2548
Number of successful extensions: 12
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16865010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)