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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_pT_D03
         (654 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q07020 Cluster: 60S ribosomal protein L18; n=124; Eukar...   216   4e-55
UniRef50_O65729 Cluster: 60S ribosomal protein L18; n=17; Eukary...   186   4e-46
UniRef50_P07279 Cluster: 60S ribosomal protein L18; n=5; Dikarya...   160   3e-38
UniRef50_Q7RPR6 Cluster: Eukaryotic ribosomal protein L18, putat...   152   8e-36
UniRef50_Q4N438 Cluster: 60S ribosomal protein L18; n=8; Eukaryo...   142   7e-33
UniRef50_Q4QG98 Cluster: 60S ribosomal protein L18; n=8; Trypano...   140   2e-32
UniRef50_A0BXY7 Cluster: Chromosome undetermined scaffold_135, w...   138   1e-31
UniRef50_UPI0000E4A07F Cluster: PREDICTED: similar to ribosomal ...   137   2e-31
UniRef50_Q7QQK8 Cluster: Ribosomal protein L18; n=1; Giardia lam...   131   2e-29
UniRef50_UPI0000498BAB Cluster: 60S ribosomal protein L18; n=1; ...   127   3e-28
UniRef50_A4D0W6 Cluster: Similar to ribosomal protein L18; 60S r...   126   6e-28
UniRef50_A0ED68 Cluster: Chromosome undetermined scaffold_9, who...   124   1e-27
UniRef50_UPI0000F2DC1A Cluster: PREDICTED: similar to ribosomal ...    97   4e-19
UniRef50_UPI000050E205 Cluster: 60S ribosomal subunit protein L1...    95   1e-18
UniRef50_UPI000155D3ED Cluster: PREDICTED: similar to ribosomal ...    75   1e-12
UniRef50_A7Q837 Cluster: Chromosome undetermined scaffold_62, wh...    72   1e-11
UniRef50_A5BN99 Cluster: Putative uncharacterized protein; n=1; ...    72   1e-11
UniRef50_Q8SS76 Cluster: 60S RIBOSOMAL PROTEIN L18; n=1; Encepha...    66   7e-10
UniRef50_Q98RU3 Cluster: 60s ribosomal protein L18; n=1; Guillar...    53   5e-06
UniRef50_Q6CXL9 Cluster: Similarity; n=1; Kluyveromyces lactis|R...    50   5e-05
UniRef50_Q8ZYQ2 Cluster: 50S ribosomal protein L18e; n=7; Thermo...    43   0.007
UniRef50_A0RXP6 Cluster: Ribosomal protein L18E; n=2; Thermoprot...    39   0.091
UniRef50_Q5ANC1 Cluster: Putative uncharacterized protein; n=1; ...    39   0.12 
UniRef50_A6UW02 Cluster: 50S ribosomal protein L15; n=1; Methano...    38   0.28 
UniRef50_Q3JMF5 Cluster: Putative uncharacterized protein; n=1; ...    37   0.49 
UniRef50_Q6ZRL6 Cluster: CDNA FLJ46261 fis, clone TESTI4025062; ...    36   0.64 
UniRef50_UPI0000DA3F07 Cluster: PREDICTED: similar to 60S riboso...    35   1.5  
UniRef50_Q8TVB7 Cluster: 50S ribosomal protein L18e; n=12; Archa...    34   2.6  
UniRef50_Q2Q0G4 Cluster: Ribosomal protein L18E; n=1; uncultured...    34   3.4  
UniRef50_UPI0000E4A0C9 Cluster: PREDICTED: similar to tethering ...    33   4.5  
UniRef50_Q4RHJ6 Cluster: Chromosome 19 SCAF15045, whole genome s...    33   4.5  
UniRef50_A5UN56 Cluster: 50S ribosomal protein L15; n=2; Methano...    33   4.5  
UniRef50_UPI0000D56F37 Cluster: PREDICTED: similar to CG4917-PA,...    33   6.0  
UniRef50_Q2RY86 Cluster: Alpha-2-macroglobulin-like protein prec...    33   6.0  
UniRef50_Q8PW46 Cluster: 50S ribosomal protein L18e; n=16; Eurya...    33   6.0  
UniRef50_Q06035 Cluster: Gag,protease,endonuclease, reverse tran...    33   7.9  
UniRef50_P11378 Cluster: Nuclear transition protein 2; n=4; Muri...    33   7.9  

>UniRef50_Q07020 Cluster: 60S ribosomal protein L18; n=124;
           Eukaryota|Rep: 60S ribosomal protein L18 - Homo sapiens
           (Human)
          Length = 188

 Score =  216 bits (527), Expect = 4e-55
 Identities = 110/184 (59%), Positives = 131/184 (71%), Gaps = 2/184 (1%)
 Frame = -2

Query: 554 MGIDINHKHDRKVRRTEVKSQDIXXXXXXXXXXXXXXRTNAKFNQIVLRRLFMSRINRPP 375
           MG+DI H  DRKVRR E KSQDI              RTN+ FNQ+VL+RLFMSR NRPP
Sbjct: 1   MGVDIRHNKDRKVRRKEPKSQDIYLRLLVKLYRFLARRTNSTFNQVVLKRLFMSRTNRPP 60

Query: 374 ISVSRLARHMKKPTREGLIAVVVGTVTNDVRLYKIPKMTVAALHVTEKARARILAAGGEI 195
           +S+SR+ R MK P RE   AVVVGT+T+DVR+ ++PK+ V AL VT +AR+RIL AGG+I
Sbjct: 61  LSLSRMIRKMKLPGRENKTAVVVGTITDDVRVQEVPKLKVCALRVTSRARSRILRAGGKI 120

Query: 194 LTFDQLALRAPTGKKTVLVQGQRNAREAVRHFGPAPGAPRXHTKPYVRTKGH--EKARPS 21
           LTFDQLAL +P G  TVL+ G R  RE  RHFG APG P  HTKPYVR+KG   E+AR  
Sbjct: 121 LTFDQLALDSPKGCGTVLLSGPRKGREVYRHFGKAPGTPHSHTKPYVRSKGRKFERAR-G 179

Query: 20  RRAN 9
           RRA+
Sbjct: 180 RRAS 183


>UniRef50_O65729 Cluster: 60S ribosomal protein L18; n=17;
           Eukaryota|Rep: 60S ribosomal protein L18 - Cicer
           arietinum (Chickpea) (Garbanzo)
          Length = 183

 Score =  186 bits (453), Expect = 4e-46
 Identities = 95/174 (54%), Positives = 123/174 (70%), Gaps = 2/174 (1%)
 Frame = -2

Query: 527 DRKVRRTEVKSQDIXXXXXXXXXXXXXXRTNAKFNQIVLRRLFMSRINRPPISVSRLARH 348
           ++K +RT  KS DI              RT++ FN ++L+RLFMS++NRPP+S+SRL ++
Sbjct: 8   NKKTKRTSPKSNDIYLKLLVKLYRFLVRRTDSNFNAVILKRLFMSKVNRPPLSLSRLIKY 67

Query: 347 MKKPTREGLIAVVVGTVTNDVRLYKIPKMTVAALHVTEKARARILAAGGEILTFDQLALR 168
           M+   +EG I VVVG VT+D+R+Y +P + V AL  TE ARARI  AGGE LTFDQLALR
Sbjct: 68  MQG--KEGKIGVVVGAVTDDIRVYDVPTIKVTALKFTETARARIQKAGGECLTFDQLALR 125

Query: 167 APTGKKTVLVQGQRNAREAVRHFGPAPGAPRXHTKPYVRTKGH--EKARPSRRA 12
            P    TVL++G +NAREAV+HFGPAPG P  HTKPYVR+KG   EKAR  R++
Sbjct: 126 LPL-TDTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRKFEKARGRRKS 178


>UniRef50_P07279 Cluster: 60S ribosomal protein L18; n=5;
           Dikarya|Rep: 60S ribosomal protein L18 - Saccharomyces
           cerevisiae (Baker's yeast)
          Length = 186

 Score =  160 bits (388), Expect = 3e-38
 Identities = 87/184 (47%), Positives = 118/184 (64%), Gaps = 3/184 (1%)
 Frame = -2

Query: 554 MGIDINHK-HDRKVRRTEVKSQDIXXXXXXXXXXXXXXRTNAKFNQIVLRRLFMSRINRP 378
           MGID   K H R   RT  KS ++              RT+A FN++VL+ LF+S+INRP
Sbjct: 1   MGIDHTSKQHKRSGHRTAPKSDNVYLKLLVKLYTFLARRTDAPFNKVVLKALFLSKINRP 60

Query: 377 PISVSRLARHMKKPTREGLIAVVVGTVTNDVRLYKIPKMTVAALHVTEKARARILAAGGE 198
           P+SVSR+AR +K+        VVVGTVT+D R+++ PK TVAAL  T  ARA+I+ AGGE
Sbjct: 61  PVSVSRIARALKQEGAANKTVVVVGTVTDDARIFEFPKTTVAALRFTAGARAKIVKAGGE 120

Query: 197 ILTFDQLALRAPTGKKTVLVQGQRNAREAVRHFGPAPGAPRXHTKPYVRTKGH--EKARP 24
            +T DQLA+RAP G+ T++++G RN+REAVRHFG  P   +    P + + G   E+AR 
Sbjct: 121 CITLDQLAVRAPKGQNTLILRGPRNSREAVRHFGMGPHKGKA---PRILSTGRKFERARG 177

Query: 23  SRRA 12
            RR+
Sbjct: 178 RRRS 181


>UniRef50_Q7RPR6 Cluster: Eukaryotic ribosomal protein L18,
           putative; n=4; Plasmodium (Vinckeia)|Rep: Eukaryotic
           ribosomal protein L18, putative - Plasmodium yoelii
           yoelii
          Length = 243

 Score =  152 bits (368), Expect = 8e-36
 Identities = 83/188 (44%), Positives = 116/188 (61%), Gaps = 3/188 (1%)
 Frame = -2

Query: 566 LVVKMGIDI-NHKHDRKVRRTEVKSQDIXXXXXXXXXXXXXXRTNAKFNQIVLRRLFMSR 390
           +++ MGID+ N    +K  R  + S++               RT+  FN+I+ +RL M +
Sbjct: 53  ILINMGIDLKNVGRIKKHGRKNLVSKNPYLRLLVKLYRFLARRTDVNFNKIIAKRLIMPK 112

Query: 389 INRPPISVSRLARHMKKPTREGLIAVVVGTVTNDVRLYKIPKMTVAALHVTEKARARILA 210
             RPP+S+S+L +HM     +  +AVVVG++T+D RL+    M V AL  TE AR RI+ 
Sbjct: 113 RFRPPLSLSKLQQHMSN--NQNSVAVVVGSITDDKRLFSCRNMKVCALRFTETARKRIVD 170

Query: 209 AGGEILTFDQLALRAPTGKKTVLVQGQRNAREAVRHFGPAPGAPRXHTKPYVRTKGH--E 36
           AGGE LTFDQLALR PTGK  +L++G   AR A +HFG APG P+   +PYVR+KG   E
Sbjct: 171 AGGECLTFDQLALRYPTGKDCILLRGPTKARTAEKHFGSAPGRPKSKARPYVRSKGRKFE 230

Query: 35  KARPSRRA 12
           KAR  R++
Sbjct: 231 KARGRRKS 238


>UniRef50_Q4N438 Cluster: 60S ribosomal protein L18; n=8;
           Eukaryota|Rep: 60S ribosomal protein L18 - Theileria
           parva
          Length = 184

 Score =  142 bits (344), Expect = 7e-33
 Identities = 76/145 (52%), Positives = 102/145 (70%), Gaps = 2/145 (1%)
 Frame = -2

Query: 440 TNAKFNQIVLRRLFMSRINRPPISVSRLARHMKKPTREGLIAVVVGTVTNDVRLYKIPKM 261
           T+  FN++VL+RL M R  + P+S+S+L++HM+K  R    AVVVGTVTND R+  +PK+
Sbjct: 40  TDHSFNKVVLKRLLMPRRFKAPLSLSKLSKHMEK--RPDNTAVVVGTVTNDERMDVVPKL 97

Query: 260 TVAALHVTEKARARILAAGGEILTFDQLALRAPTGKKTVLVQGQRNAREAVRHFGPAPGA 81
           +V AL VTE AR RILA+GGE+LTFDQL  R+PTG +  L++G   AREAV+HF      
Sbjct: 98  SVCALRVTETARKRILASGGEVLTFDQLVARSPTGSRCTLLRGATKAREAVKHF---RNE 154

Query: 80  PRXHTKPYVRTKGH--EKARPSRRA 12
            + + KPYVR+KG   EKAR  R +
Sbjct: 155 VKGNPKPYVRSKGRKFEKARGRRHS 179


>UniRef50_Q4QG98 Cluster: 60S ribosomal protein L18; n=8;
           Trypanosomatidae|Rep: 60S ribosomal protein L18 -
           Leishmania major
          Length = 198

 Score =  140 bits (340), Expect = 2e-32
 Identities = 75/147 (51%), Positives = 100/147 (68%), Gaps = 6/147 (4%)
 Frame = -2

Query: 440 TNAKFNQIVLRRLFMSRINRPPISVSRLARHMKKP------TREGLIAVVVGTVTNDVRL 279
           T++ FN++V +RL  SR NR PIS+SR+A  MK+       ++   IAVVVG V +DVR+
Sbjct: 40  TSSGFNKVVYQRLIKSRSNRAPISLSRIAVVMKRKAVFTAKSKAAPIAVVVGDVLDDVRM 99

Query: 278 YKIPKMTVAALHVTEKARARILAAGGEILTFDQLALRAPTGKKTVLVQGQRNAREAVRHF 99
            +IP M V AL  ++ AR  I+AAGGE LTFDQLA+ APTGK T L++G+++ RE+VRHF
Sbjct: 100 ARIPAMRVCALRFSKSARQSIVAAGGECLTFDQLAMIAPTGKNTYLLRGRKSGRESVRHF 159

Query: 98  GPAPGAPRXHTKPYVRTKGHEKARPSR 18
           G A G P  H+KPY   +G E  R  R
Sbjct: 160 G-ASGVPGSHSKPYATNRGKETKRGRR 185


>UniRef50_A0BXY7 Cluster: Chromosome undetermined scaffold_135,
           whole genome shotgun sequence; n=3; Eukaryota|Rep:
           Chromosome undetermined scaffold_135, whole genome
           shotgun sequence - Paramecium tetraurelia
          Length = 393

 Score =  138 bits (333), Expect = 1e-31
 Identities = 81/186 (43%), Positives = 111/186 (59%), Gaps = 2/186 (1%)
 Frame = -2

Query: 605 REFK*IRPADVFLLVVKMGIDINHKH--DRKVRRTEVKSQDIXXXXXXXXXXXXXXRTNA 432
           +++K ++  +   L ++ G+D   K    R V R +V S ++              RT++
Sbjct: 199 KKYKNLKNGNQTSLSIQQGVDAYKKTRVQRNVGR-KVTSTNLYLKLLIKLYKFLARRTDS 257

Query: 431 KFNQIVLRRLFMSRINRPPISVSRLARHMKKPTREGLIAVVVGTVTNDVRLYKIPKMTVA 252
           +FN  VLRRL  +R  R PISVSRL + +     +    VVVGTVT+D RL  +PK+ V 
Sbjct: 258 QFNATVLRRLQSTRTARYPISVSRLVKQINTAKDKTRTLVVVGTVTDDARLLTVPKLNVC 317

Query: 251 ALHVTEKARARILAAGGEILTFDQLALRAPTGKKTVLVQGQRNAREAVRHFGPAPGAPRX 72
           AL  TE AR RILAAGG+ LTFDQLA + PTG  T+L++G +  REA++HFG A G P  
Sbjct: 318 ALRFTETARKRILAAGGKTLTFDQLAQQNPTGTGTILLRGPK-VREALKHFGRAAGLPGS 376

Query: 71  HTKPYV 54
           H KPYV
Sbjct: 377 HAKPYV 382


>UniRef50_UPI0000E4A07F Cluster: PREDICTED: similar to ribosomal
           protein L18, partial; n=1; Strongylocentrotus
           purpuratus|Rep: PREDICTED: similar to ribosomal protein
           L18, partial - Strongylocentrotus purpuratus
          Length = 354

 Score =  137 bits (332), Expect = 2e-31
 Identities = 65/112 (58%), Positives = 88/112 (78%)
 Frame = -2

Query: 440 TNAKFNQIVLRRLFMSRINRPPISVSRLARHMKKPTREGLIAVVVGTVTNDVRLYKIPKM 261
           TNAKFN IVL+RLFMSR N+  +S++R+ R M K  REG  AVVVG +T+DVR++K+PK+
Sbjct: 9   TNAKFNNIVLKRLFMSRSNKAAMSLARVVRFMNKDGREGKTAVVVGCITDDVRIHKLPKL 68

Query: 260 TVAALHVTEKARARILAAGGEILTFDQLALRAPTGKKTVLVQGQRNAREAVR 105
            + AL VT +ARARI+ AGGEI+TFDQLAL++P G+ TVL+QG ++  +  R
Sbjct: 69  KICALRVTARARARIIKAGGEIITFDQLALQSPKGQNTVLMQGFKSETDMER 120


>UniRef50_Q7QQK8 Cluster: Ribosomal protein L18; n=1; Giardia
           lamblia ATCC 50803|Rep: Ribosomal protein L18 - Giardia
           lamblia ATCC 50803
          Length = 179

 Score =  131 bits (316), Expect = 2e-29
 Identities = 77/177 (43%), Positives = 98/177 (55%), Gaps = 1/177 (0%)
 Frame = -2

Query: 554 MGIDINHK-HDRKVRRTEVKSQDIXXXXXXXXXXXXXXRTNAKFNQIVLRRLFMSRINRP 378
           MGID+      RKV R E KS +                T   F +++ +RL +S+ NRP
Sbjct: 1   MGIDLKTGIKKRKVERKEPKSPNPYIRLLHNAFKVVYENTGEDFTKVLTKRLCLSKTNRP 60

Query: 377 PISVSRLARHMKKPTREGLIAVVVGTVTNDVRLYKIPKMTVAALHVTEKARARILAAGGE 198
            +SVSRLA  M K  RE  IAVV  TVTND RL  IP+MT+ AL  +  AR+RI  AGG 
Sbjct: 61  VLSVSRLAHLMHK--REDKIAVVASTVTNDERLVTIPRMTICALKFSATARSRIEKAGGR 118

Query: 197 ILTFDQLALRAPTGKKTVLVQGQRNAREAVRHFGPAPGAPRXHTKPYVRTKGHEKAR 27
            ++FD+L    PTG   VL+QG+R+ R   + FG +PG P  H KP    KG   AR
Sbjct: 119 CMSFDELLAEKPTGDNCVLLQGRRSCRAVCKKFG-SPGRPNSHVKPKGEHKGRRGAR 174


>UniRef50_UPI0000498BAB Cluster: 60S ribosomal protein L18; n=1;
           Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
           protein L18 - Entamoeba histolytica HM-1:IMSS
          Length = 168

 Score =  127 bits (306), Expect = 3e-28
 Identities = 71/153 (46%), Positives = 93/153 (60%)
 Frame = -2

Query: 554 MGIDINHKHDRKVRRTEVKSQDIXXXXXXXXXXXXXXRTNAKFNQIVLRRLFMSRINRPP 375
           M ID++  H RK      +  +               RT +KF + +L RL +SR+NRP 
Sbjct: 1   MAIDLDRHHVRKHVSKTARGNNAYMKLLVRLYGFLARRTQSKFAKTILHRLCLSRVNRPI 60

Query: 374 ISVSRLARHMKKPTREGLIAVVVGTVTNDVRLYKIPKMTVAALHVTEKARARILAAGGEI 195
           +S S+LA  MKK   E   AV V TVT D R Y +PKM V AL  T+ A A I  AGG+ 
Sbjct: 61  VSTSKLACLMKKHPEE--TAVCVNTVTYDSR-YPVPKMNVCALKFTKTAEAAITKAGGKC 117

Query: 194 LTFDQLALRAPTGKKTVLVQGQRNAREAVRHFG 96
           L FD+LAL+APTG+KTVL++G+RN REA++HFG
Sbjct: 118 LRFDELALKAPTGRKTVLIRGKRNVREALKHFG 150


>UniRef50_A4D0W6 Cluster: Similar to ribosomal protein L18; 60S
           ribosomal protein L18; n=2; Homo sapiens|Rep: Similar to
           ribosomal protein L18; 60S ribosomal protein L18 - Homo
           sapiens (Human)
          Length = 224

 Score =  126 bits (303), Expect = 6e-28
 Identities = 61/117 (52%), Positives = 80/117 (68%)
 Frame = -2

Query: 386 NRPPISVSRLARHMKKPTREGLIAVVVGTVTNDVRLYKIPKMTVAALHVTEKARARILAA 207
           N+PP+S+SR+   MK P +E   AVVVGT+T+DV + ++PK+ V AL VT +AR+ I+  
Sbjct: 93  NQPPLSLSRMIPKMKLPGQENKTAVVVGTITDDVWVQEVPKLKVCALGVTSRARSHIVRV 152

Query: 206 GGEILTFDQLALRAPTGKKTVLVQGQRNAREAVRHFGPAPGAPRXHTKPYVRTKGHE 36
           GG+ LTFDQLAL +P    TVL+ G R  RE   HF  A G P  HTKPYVR+KG +
Sbjct: 153 GGKNLTFDQLALDSPKVCSTVLLSGPRKGREVYWHFDKALGTPHSHTKPYVRSKGRK 209


>UniRef50_A0ED68 Cluster: Chromosome undetermined scaffold_9, whole
           genome shotgun sequence; n=6; Eukaryota|Rep: Chromosome
           undetermined scaffold_9, whole genome shotgun sequence -
           Paramecium tetraurelia
          Length = 469

 Score =  124 bits (300), Expect = 1e-27
 Identities = 69/129 (53%), Positives = 85/129 (65%)
 Frame = -2

Query: 440 TNAKFNQIVLRRLFMSRINRPPISVSRLARHMKKPTREGLIAVVVGTVTNDVRLYKIPKM 261
           T++ FN  VLRRL  +R  R PISVSRL + +     +    VVVGTVT+DVRL  +PK+
Sbjct: 335 TDSNFNATVLRRLQQTRTARYPISVSRLVKQINTAKDKTRTLVVVGTVTDDVRLLTVPKI 394

Query: 260 TVAALHVTEKARARILAAGGEILTFDQLALRAPTGKKTVLVQGQRNAREAVRHFGPAPGA 81
            V     TE AR RILAAGG+ LTFDQLA + PTG  T+L++G R  RE ++HFG A G 
Sbjct: 395 KV----FTETARKRILAAGGKTLTFDQLAQQNPTGTGTILLRGPR-VREELKHFGRAAGL 449

Query: 80  PRXHTKPYV 54
           P  H KPYV
Sbjct: 450 PGSHAKPYV 458


>UniRef50_UPI0000F2DC1A Cluster: PREDICTED: similar to ribosomal
           protein L18; n=1; Monodelphis domestica|Rep: PREDICTED:
           similar to ribosomal protein L18 - Monodelphis domestica
          Length = 184

 Score = 96.7 bits (230), Expect = 4e-19
 Identities = 48/113 (42%), Positives = 70/113 (61%)
 Frame = -2

Query: 380 PPISVSRLARHMKKPTREGLIAVVVGTVTNDVRLYKIPKMTVAALHVTEKARARILAAGG 201
           PP+ +SR+ R MK    E   A V+GTVT+++R+  +PK+ V+AL VT  AR+RIL A G
Sbjct: 47  PPLPLSRMIRKMKLEGTENKTAAVMGTVTDNIRIQDVPKLKVSALRVTSNARSRILKANG 106

Query: 200 EILTFDQLALRAPTGKKTVLVQGQRNAREAVRHFGPAPGAPRXHTKPYVRTKG 42
           +IL+FDQLA+ +P        +G +   +  RH G   G+P  + KPYV + G
Sbjct: 107 KILSFDQLAMTSP--------KGPQKCYQGYRHLGKVSGSPHSYAKPYVGSTG 151


>UniRef50_UPI000050E205 Cluster: 60S ribosomal subunit protein L18;
           n=1; Theileria annulata strain Ankara|Rep: 60S ribosomal
           subunit protein L18 - Theileria annulata strain Ankara
          Length = 222

 Score = 95.1 bits (226), Expect = 1e-18
 Identities = 50/96 (52%), Positives = 66/96 (68%), Gaps = 2/96 (2%)
 Frame = -2

Query: 293 NDVRLYKIPKMTVAALHVTEKARARILAAGGEILTFDQLALRAPTGKKTVLVQGQRNARE 114
           +D R+  +PK++V AL VTE AR RILA+GGE+LTFDQL  R+P G K  L++G+  ARE
Sbjct: 125 DDERMDVVPKLSVCALRVTETARKRILASGGEVLTFDQLVARSPIGGKCTLLRGETKARE 184

Query: 113 AVRHFGPAPGAPRXHTKPYVRTKGH--EKARPSRRA 12
           AV+HF       + + KPYVR+KG   EKAR  R +
Sbjct: 185 AVKHF---RNEVKGNPKPYVRSKGRKFEKARGRRHS 217



 Score = 56.4 bits (130), Expect = 6e-07
 Identities = 31/68 (45%), Positives = 45/68 (66%)
 Frame = -2

Query: 440 TNAKFNQIVLRRLFMSRINRPPISVSRLARHMKKPTREGLIAVVVGTVTNDVRLYKIPKM 261
           T+  FN+IVL+RL M R  + P+S+S+L++HM+  +R    AVV+GTVT+   L  IP  
Sbjct: 40  TDFPFNKIVLKRLLMPRRYKAPLSLSKLSKHME--SRPNNTAVVIGTVTSTESLGMIPST 97

Query: 260 TVAALHVT 237
           TV  + VT
Sbjct: 98  TVTLVLVT 105


>UniRef50_UPI000155D3ED Cluster: PREDICTED: similar to ribosomal
           protein L18; n=1; Ornithorhynchus anatinus|Rep:
           PREDICTED: similar to ribosomal protein L18 -
           Ornithorhynchus anatinus
          Length = 188

 Score = 74.9 bits (176), Expect = 1e-12
 Identities = 35/66 (53%), Positives = 45/66 (68%)
 Frame = -2

Query: 554 MGIDINHKHDRKVRRTEVKSQDIXXXXXXXXXXXXXXRTNAKFNQIVLRRLFMSRINRPP 375
           +G+DI H  DRKVRR E KSQDI              RTN+ FN++VL+RLFMSR NRPP
Sbjct: 110 LGVDIRHNKDRKVRRKEPKSQDIYLRLLVKLYRFLARRTNSSFNKVVLKRLFMSRTNRPP 169

Query: 374 ISVSRL 357
           +++SR+
Sbjct: 170 LALSRM 175


>UniRef50_A7Q837 Cluster: Chromosome undetermined scaffold_62, whole
           genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome undetermined scaffold_62, whole genome
           shotgun sequence - Vitis vinifera (Grape)
          Length = 421

 Score = 72.1 bits (169), Expect = 1e-11
 Identities = 39/113 (34%), Positives = 66/113 (58%)
 Frame = -2

Query: 554 MGIDINHKHDRKVRRTEVKSQDIXXXXXXXXXXXXXXRTNAKFNQIVLRRLFMSRINRPP 375
           +G+ ++ K  +K + T  KS DI              +T +KFN + L+R FMS++N+ P
Sbjct: 3   IGLVVDDK-SKKTKCTAPKSDDIYLKLTVKLYHFLVRKTGSKFNVVTLKRFFMSKVNKLP 61

Query: 374 ISVSRLARHMKKPTREGLIAVVVGTVTNDVRLYKIPKMTVAALHVTEKARARI 216
           + +SRL R M    ++G I VV+G+VT+D+R+Y++  + V  L  T++ R  I
Sbjct: 62  LLLSRLVRFM--DGKKGKIVVVIGSVTDDLRVYEVLYLKVTILRFTKRVREGI 112


>UniRef50_A5BN99 Cluster: Putative uncharacterized protein; n=1;
           Vitis vinifera|Rep: Putative uncharacterized protein -
           Vitis vinifera (Grape)
          Length = 271

 Score = 72.1 bits (169), Expect = 1e-11
 Identities = 39/113 (34%), Positives = 66/113 (58%)
 Frame = -2

Query: 554 MGIDINHKHDRKVRRTEVKSQDIXXXXXXXXXXXXXXRTNAKFNQIVLRRLFMSRINRPP 375
           +G+ ++ K  +K + T  KS DI              +T +KFN + L+R FMS++N+ P
Sbjct: 3   IGLVVDDK-SKKTKCTAPKSDDIYLKLTVKLYHFLVRKTGSKFNVVTLKRFFMSKVNKLP 61

Query: 374 ISVSRLARHMKKPTREGLIAVVVGTVTNDVRLYKIPKMTVAALHVTEKARARI 216
           + +SRL R M    ++G I VV+G+VT+D+R+Y++  + V  L  T++ R  I
Sbjct: 62  LLLSRLVRFM--DGKKGKIVVVIGSVTDDLRVYEVLYLKVTILRFTKRVREGI 112


>UniRef50_Q8SS76 Cluster: 60S RIBOSOMAL PROTEIN L18; n=1;
           Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L18
           - Encephalitozoon cuniculi
          Length = 200

 Score = 66.1 bits (154), Expect = 7e-10
 Identities = 43/162 (26%), Positives = 75/162 (46%)
 Frame = -2

Query: 512 RTEVKSQDIXXXXXXXXXXXXXXRTNAKFNQIVLRRLFMSRINRPPISVSRLARHMKKPT 333
           R E +S++I               ++    + + +RL MS+ +R P+ +S++   + +  
Sbjct: 20  RKEPRSKNIYLRALSDFYTKVASNSSVLAIKKISKRLKMSKSDRQPVKISKIVSEIGESK 79

Query: 332 REGLIAVVVGTVTNDVRLYKIPKMTVAALHVTEKARARILAAGGEILTFDQLALRAPTGK 153
            +  +AVVV  V +D  +  IP + V AL  ++  + +I   GG I T DQL    P   
Sbjct: 80  DK--VAVVVAKVLDDDEVMVIPAVKVVALQWSKGVKEKIERYGGTIGTLDQLFELCPNMD 137

Query: 152 KTVLVQGQRNAREAVRHFGPAPGAPRXHTKPYVRTKGHEKAR 27
              LV   + +R + + +GPAPG     T P    K H + +
Sbjct: 138 DICLVSTNKFSRRSAKFWGPAPGEKGSTTYPRANQKCHNREK 179


>UniRef50_Q98RU3 Cluster: 60s ribosomal protein L18; n=1; Guillardia
           theta|Rep: 60s ribosomal protein L18 - Guillardia theta
           (Cryptomonas phi)
          Length = 167

 Score = 53.2 bits (122), Expect = 5e-06
 Identities = 28/102 (27%), Positives = 57/102 (55%)
 Frame = -2

Query: 431 KFNQIVLRRLFMSRINRPPISVSRLARHMKKPTREGLIAVVVGTVTNDVRLYKIPKMTVA 252
           KF + ++RR   SR +R  IS+S+L +   K T + ++ V    + ND R+ K PK+ + 
Sbjct: 67  KFLKELIRRTNSSRKSRSVISLSKLIKFSLKDTTKSILTV--SKILNDERISKTPKLKIF 124

Query: 251 ALHVTEKARARILAAGGEILTFDQLALRAPTGKKTVLVQGQR 126
           AL+ +   + +I+  GG+I   +++ +      K + ++G++
Sbjct: 125 ALNFSSSVKKKIIENGGQIFKLNEIKVDDFLNMKILFIRGKK 166


>UniRef50_Q6CXL9 Cluster: Similarity; n=1; Kluyveromyces lactis|Rep:
           Similarity - Kluyveromyces lactis (Yeast) (Candida
           sphaerica)
          Length = 186

 Score = 50.0 bits (114), Expect = 5e-05
 Identities = 38/145 (26%), Positives = 70/145 (48%)
 Frame = +3

Query: 12  STTTGPCFFMSLGANIGFSVXARCSWSRAKVTHCLTSISLTLYQYCLLASRSTKSQLIKS 191
           ST+T   F +S G    +S+      +  +V+   +  S T     +L   S+ SQLI+S
Sbjct: 28  STSTSSSFELSTGRLDSWSLTL--VRTETEVSSSFSGSSWTSDDQGVLTLWSSNSQLIQS 85

Query: 192 KNFSSSSQNACTSFFGNMKSSHRHLRYLVQSHVICDCPHYHGNQTLTSWLLHVARQTRHR 371
             F++S Q+         +SS+  L     S VI +  +       +++LL  +R + +R
Sbjct: 86  DGFTTSLQDLSLGTSSESQSSNGGLWEFKDSVVIGNSTNNDNGLLSSTFLLQGSRDSGNR 145

Query: 372 DWWPVDTAHKEPA*NDLIEFGICTS 446
           +WW VD   ++   ++L+E+ I T+
Sbjct: 146 NWWSVDLGQEQRLQDNLVEWSISTT 170


>UniRef50_Q8ZYQ2 Cluster: 50S ribosomal protein L18e; n=7;
           Thermoprotei|Rep: 50S ribosomal protein L18e -
           Pyrobaculum aerophilum
          Length = 122

 Score = 42.7 bits (96), Expect = 0.007
 Identities = 23/70 (32%), Positives = 40/70 (57%)
 Frame = -2

Query: 347 MKKPTREGLIAVVVGTVTNDVRLYKIPKMTVAALHVTEKARARILAAGGEILTFDQLALR 168
           + +  +EG + VV G +    +L K  K+ VAA+ ++ KA  +++ AGGE+LT  +L  +
Sbjct: 54  LNRVAKEGDVVVVPGKLLAGGQLNK--KIIVAAVKISPKAARKVIEAGGEVLTIPELVRK 111

Query: 167 APTGKKTVLV 138
            P G    +V
Sbjct: 112 YPRGSGVRIV 121


>UniRef50_A0RXP6 Cluster: Ribosomal protein L18E; n=2;
           Thermoprotei|Rep: Ribosomal protein L18E - Cenarchaeum
           symbiosum
          Length = 126

 Score = 39.1 bits (87), Expect = 0.091
 Identities = 24/82 (29%), Positives = 45/82 (54%)
 Frame = -2

Query: 383 RPPISVSRLARHMKKPTREGLIAVVVGTVTNDVRLYKIPKMTVAALHVTEKARARILAAG 204
           R  ++++++AR+    T+EG + VV G V     +    K+T+    ++  A  ++L++G
Sbjct: 50  RRTLNLNKIARY----TKEGDVVVVPGRVLGTGSMPH--KITLCPFGISGAAAEKVLSSG 103

Query: 203 GEILTFDQLALRAPTGKKTVLV 138
           G +  F +L    PTGK  VL+
Sbjct: 104 GRVTGFAELTKEFPTGKGVVLL 125


>UniRef50_Q5ANC1 Cluster: Putative uncharacterized protein; n=1;
           Candida albicans|Rep: Putative uncharacterized protein -
           Candida albicans (Yeast)
          Length = 123

 Score = 38.7 bits (86), Expect = 0.12
 Identities = 26/64 (40%), Positives = 34/64 (53%)
 Frame = +1

Query: 199 SPPAAKMRARAFSVT*RAATVIFGILYSLTSFVTVPTTTAIKPSRVGFFMWRAKRDTEIG 378
           SPP  K+ + A +V  +AA V FG   +  S VTVPTTT +  +    F      +TE G
Sbjct: 3   SPPFFKISSLAPAVNLKAAIVAFGNSNNSLSSVTVPTTTMVFSAAPFCFKALEILETETG 62

Query: 379 GRLI 390
           G LI
Sbjct: 63  GSLI 66


>UniRef50_A6UW02 Cluster: 50S ribosomal protein L15; n=1;
           Methanococcus aeolicus Nankai-3|Rep: 50S ribosomal
           protein L15 - Methanococcus aeolicus Nankai-3
          Length = 120

 Score = 37.5 bits (83), Expect = 0.28
 Identities = 25/91 (27%), Positives = 43/91 (47%), Gaps = 1/91 (1%)
 Frame = -2

Query: 425 NQIVLRRLFMSRINRPPISVSRL-ARHMKKPTREGLIAVVVGTVTNDVRLYKIPKMTVAA 249
           N + + +    R+++P   +S +    + + T E  + VV G V    +L    K+TVAA
Sbjct: 25  NDVKIWKDLAKRLSKPSRIISEVNVSRLNRYTEENHVVVVPGKVLGSGKLAH--KITVAA 82

Query: 248 LHVTEKARARILAAGGEILTFDQLALRAPTG 156
              +E A+  +  AGG  +T  +L    P G
Sbjct: 83  FSFSEGAKKAVEEAGGRCITIKELINENPKG 113


>UniRef50_Q3JMF5 Cluster: Putative uncharacterized protein; n=1;
           Burkholderia pseudomallei 1710b|Rep: Putative
           uncharacterized protein - Burkholderia pseudomallei
           (strain 1710b)
          Length = 740

 Score = 36.7 bits (81), Expect = 0.49
 Identities = 21/56 (37%), Positives = 28/56 (50%)
 Frame = -2

Query: 176 ALRAPTGKKTVLVQGQRNAREAVRHFGPAPGAPRXHTKPYVRTKGHEKARPSRRAN 9
           A RAP G    L+   R AR + R   P P  PR  T+P+   +   +AR SRR +
Sbjct: 668 ATRAPFGACAALIARARGARRSRRARAP-PRTPRTATRPHAARRRGRRARRSRRGS 722


>UniRef50_Q6ZRL6 Cluster: CDNA FLJ46261 fis, clone TESTI4025062;
           n=2; Homo sapiens|Rep: CDNA FLJ46261 fis, clone
           TESTI4025062 - Homo sapiens (Human)
          Length = 280

 Score = 36.3 bits (80), Expect = 0.64
 Identities = 30/102 (29%), Positives = 39/102 (38%), Gaps = 9/102 (8%)
 Frame = -1

Query: 318 CRGSGDSHK*RETVQDTEDDGGCSSCYRKSSCTHFGCWRRNSYF-----*SAGSSCSDWQ 154
           CR SG S   R           CS     +S T   CW   + F      S+G+S +   
Sbjct: 30  CRSSGTSSTSRSWWSSGTSSTSCSWWSSGTSSTFCSCWSSGTSFTSCSCWSSGTSSTPCS 89

Query: 153 EDSTGTRSAKC----S*GSASLWPCSRSTAXSH*TLCSHQGT 40
             S+GT S  C    S  S++ W C  S   S   +C   GT
Sbjct: 90  CRSSGTSSTSCSCWSSGTSSTSWSCKSSGTSSTCYMCLSSGT 131


>UniRef50_UPI0000DA3F07 Cluster: PREDICTED: similar to 60S ribosomal
           protein L18; n=1; Rattus norvegicus|Rep: PREDICTED:
           similar to 60S ribosomal protein L18 - Rattus norvegicus
          Length = 112

 Score = 35.1 bits (77), Expect = 1.5
 Identities = 17/38 (44%), Positives = 25/38 (65%)
 Frame = -2

Query: 359 LARHMKKPTREGLIAVVVGTVTNDVRLYKIPKMTVAAL 246
           + + MK P  E   AVVVG VT+DVR+ ++ ++ V AL
Sbjct: 1   MIQKMKLPGWENKTAVVVGMVTDDVRILEVHRLKVCAL 38


>UniRef50_Q8TVB7 Cluster: 50S ribosomal protein L18e; n=12;
           Archaea|Rep: 50S ribosomal protein L18e - Methanopyrus
           kandleri
          Length = 127

 Score = 34.3 bits (75), Expect = 2.6
 Identities = 30/102 (29%), Positives = 47/102 (46%), Gaps = 1/102 (0%)
 Frame = -2

Query: 437 NAKFNQIVLRRLFMSRINRPPISVSRLARHMKKPT-REGLIAVVVGTVTNDVRLYKIPKM 261
           NA   + V  RL   R  R  ++V +L    ++   +E    +V G V  D  + +   +
Sbjct: 28  NAPVWRDVAERLSRPRRQRAEVNVGKLDGLARRGVIQEEETVLVPGKVLGDGVITQ--PL 85

Query: 260 TVAALHVTEKARARILAAGGEILTFDQLALRAPTGKKTVLVQ 135
            VAA   +  AR +I AAGGE LT  +L    P G    +++
Sbjct: 86  RVAAWRFSRTARMKIEAAGGECLTIRELLEENPEGSYIRIIE 127


>UniRef50_Q2Q0G4 Cluster: Ribosomal protein L18E; n=1; uncultured
           organism HF70_19B12|Rep: Ribosomal protein L18E -
           uncultured organism HF70_19B12
          Length = 121

 Score = 33.9 bits (74), Expect = 3.4
 Identities = 32/96 (33%), Positives = 45/96 (46%)
 Frame = -2

Query: 440 TNAKFNQIVLRRLFMSRINRPPISVSRLARHMKKPTREGLIAVVVGTVTNDVRLYKIPKM 261
           T A   + V  RL  SR N    ++SRL+R       E    +V G +     +   P  
Sbjct: 26  TGAALWRDVALRLETSRSNWAEPNLSRLSR----TAGEDETILVPGKLLGSGDVIGSP-- 79

Query: 260 TVAALHVTEKARARILAAGGEILTFDQLALRAPTGK 153
           +VAA  V+  AR++I AAGG ++T   L    P GK
Sbjct: 80  SVAAYSVSAGARSKIEAAGGRVMTIRDLMNDNPNGK 115


>UniRef50_UPI0000E4A0C9 Cluster: PREDICTED: similar to tethering
           factor SEC34; n=2; Strongylocentrotus purpuratus|Rep:
           PREDICTED: similar to tethering factor SEC34 -
           Strongylocentrotus purpuratus
          Length = 781

 Score = 33.5 bits (73), Expect = 4.5
 Identities = 17/63 (26%), Positives = 37/63 (58%)
 Frame = +3

Query: 93  RAKVTHCLTSISLTLYQYCLLASRSTKSQLIKSKNFSSSSQNACTSFFGNMKSSHRHLRY 272
           +A+   CL+  +LTL +  +    +  +Q +  K+ +S+S+NA T F+G  +S+   ++ 
Sbjct: 198 QARFKQCLSK-ALTLIKAAVFTILNGATQQVVPKDVTSTSENAFTLFYGKFRSNAPKIKA 256

Query: 273 LVQ 281
           L++
Sbjct: 257 LME 259


>UniRef50_Q4RHJ6 Cluster: Chromosome 19 SCAF15045, whole genome
           shotgun sequence; n=2; Tetraodontidae|Rep: Chromosome 19
           SCAF15045, whole genome shotgun sequence - Tetraodon
           nigroviridis (Green puffer)
          Length = 598

 Score = 33.5 bits (73), Expect = 4.5
 Identities = 22/67 (32%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
 Frame = +3

Query: 18  TTGPCFFMSLGANIGFSVXARCS-WSRAKVTHCLTSISLTLYQYCLLASRSTKSQLIKSK 194
           T  P +++ L     FS+ A    W   K T    +I+LT  Q+CLL  R+T      + 
Sbjct: 49  TYWPIWYIELVFATLFSLNAVFDFWKYFKYTMAPYTIALTPEQHCLLGLRNTGEHFCSTS 108

Query: 195 NFSSSSQ 215
           NF+ SS+
Sbjct: 109 NFARSSK 115


>UniRef50_A5UN56 Cluster: 50S ribosomal protein L15; n=2;
           Methanobacteriaceae|Rep: 50S ribosomal protein L15 -
           Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM
           861)
          Length = 121

 Score = 33.5 bits (73), Expect = 4.5
 Identities = 27/101 (26%), Positives = 49/101 (48%)
 Frame = -2

Query: 437 NAKFNQIVLRRLFMSRINRPPISVSRLARHMKKPTREGLIAVVVGTVTNDVRLYKIPKMT 258
           NA   + V  RL  S      +++S +AR+           +V G V ++  L +  K+ 
Sbjct: 27  NAAIWKDVANRLGRSNRRTAEVNLSDIARYANADET----VLVPGKVLSNGDLTE--KVN 80

Query: 257 VAALHVTEKARARILAAGGEILTFDQLALRAPTGKKTVLVQ 135
           VAA   ++KA+ +I +AGGE ++ D +    P G    +++
Sbjct: 81  VAAFKFSQKAQEKIESAGGECVSIDDIMESNPKGSNIRIME 121


>UniRef50_UPI0000D56F37 Cluster: PREDICTED: similar to CG4917-PA,
           isoform A; n=1; Tribolium castaneum|Rep: PREDICTED:
           similar to CG4917-PA, isoform A - Tribolium castaneum
          Length = 838

 Score = 33.1 bits (72), Expect = 6.0
 Identities = 15/37 (40%), Positives = 23/37 (62%)
 Frame = -3

Query: 196 FLLLISWLFVLRLARRQYWYKVSEMLVRQCVTLALLQ 86
           FL +   L ++++A RQ W    +ML+  CVTL+ LQ
Sbjct: 455 FLYMFIPLLLVKIASRQDWKGTYQMLIPHCVTLSWLQ 491


>UniRef50_Q2RY86 Cluster: Alpha-2-macroglobulin-like protein
            precursor; n=1; Rhodospirillum rubrum ATCC 11170|Rep:
            Alpha-2-macroglobulin-like protein precursor -
            Rhodospirillum rubrum (strain ATCC 11170 / NCIB 8255)
          Length = 1759

 Score = 33.1 bits (72), Expect = 6.0
 Identities = 31/125 (24%), Positives = 51/125 (40%), Gaps = 4/125 (3%)
 Frame = -2

Query: 389  INRPPISVSRLARHMKKPTREGLIAVVVGTVTNDVRLYKIPKMTVAALHVTEKARARILA 210
            +  P ++++ L R +  P     ++V +  +     ++ +  +   AL V E  RA  LA
Sbjct: 1141 VRDPMVAMATLPRFLA-PGDRSFLSVSLDNIDGPAGVWTLAAVGEGALSVPEGPRAVDLA 1199

Query: 209  AGGEILTFDQLALRA----PTGKKTVLVQGQRNAREAVRHFGPAPGAPRXHTKPYVRTKG 42
             GG  L   +LA+      P   +  +       RE    F   PGAPR      +   G
Sbjct: 1200 KGGRDLV--RLAVEGLNPGPGTLRLAITAPTGERREKTWSFDVRPGAPRMTLAHRLDLGG 1257

Query: 41   HEKAR 27
            H +AR
Sbjct: 1258 HGRAR 1262


>UniRef50_Q8PW46 Cluster: 50S ribosomal protein L18e; n=16;
           Euryarchaeota|Rep: 50S ribosomal protein L18e -
           Methanosarcina mazei (Methanosarcina frisia)
          Length = 126

 Score = 33.1 bits (72), Expect = 6.0
 Identities = 26/87 (29%), Positives = 44/87 (50%)
 Frame = -2

Query: 416 VLRRLFMSRINRPPISVSRLARHMKKPTREGLIAVVVGTVTNDVRLYKIPKMTVAALHVT 237
           + +RL     N   +++S++ RH    T E  + +V G V     L   P +TVAA+  +
Sbjct: 39  IAKRLEAPSRNYAAVNISKINRH----TAENDVLLVPGKVLG-AGLLDHP-VTVAAVTFS 92

Query: 236 EKARARILAAGGEILTFDQLALRAPTG 156
           E A  +I  AGG+ L+ +++    P G
Sbjct: 93  ESAVEKITEAGGKCLSVEEIMEANPKG 119


>UniRef50_Q06035 Cluster: Gag,protease,endonuclease, reverse
            transcriptase,RNaseH; n=6; Volvox carteri|Rep:
            Gag,protease,endonuclease, reverse transcriptase,RNaseH -
            Volvox carteri
          Length = 1462

 Score = 32.7 bits (71), Expect = 7.9
 Identities = 24/71 (33%), Positives = 37/71 (52%), Gaps = 8/71 (11%)
 Frame = -2

Query: 431  KFNQIVLRRLFMSRINRPPI--SVSRLARHMKKPTRE------GLIAVVVGTVTNDVRLY 276
            +F +++   L++S   RP I  SV  LARHM KPT E      G++  + GT    + + 
Sbjct: 1244 RFGELIGSLLYLSVGTRPDIAYSVGALARHMSKPTVEHWQAAKGVVRYIAGTA--GLGIV 1301

Query: 275  KIPKMTVAALH 243
              PK +  +LH
Sbjct: 1302 FSPKSSNPSLH 1312


>UniRef50_P11378 Cluster: Nuclear transition protein 2; n=4;
           Murinae|Rep: Nuclear transition protein 2 - Mus musculus
           (Mouse)
          Length = 117

 Score = 32.7 bits (71), Expect = 7.9
 Identities = 14/29 (48%), Positives = 18/29 (62%)
 Frame = -2

Query: 95  PAPGAPRXHTKPYVRTKGHEKARPSRRAN 9
           P+PG P  H KP V ++ H  ARPS R +
Sbjct: 53  PSPGPPMKHPKPSVHSR-HSPARPSHRGS 80


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 692,551,303
Number of Sequences: 1657284
Number of extensions: 14814623
Number of successful extensions: 41363
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 39758
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 41310
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 49173558301
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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