Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P17_pT_D01
(595 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ855492-1|ABH88179.1| 251|Tribolium castaneum chemosensory pro... 26 0.28
AF017415-1|AAB70262.1| 343|Tribolium castaneum abdominal-AII pr... 24 1.1
AF017414-1|AAB70260.1| 209|Tribolium castaneum abdominal-AII pr... 24 1.1
AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax pr... 23 1.9
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro... 22 4.5
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad... 22 4.5
AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax pr... 22 4.5
AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax pr... 22 4.5
AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax pr... 22 4.5
AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax pr... 22 4.5
AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax pr... 22 4.5
AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein. 22 4.5
AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduce... 22 4.5
AJ457831-1|CAD29886.1| 249|Tribolium castaneum helix-loop-helix... 21 5.9
AJ223627-1|CAA11500.1| 371|Tribolium castaneum orthodenticle-1 ... 21 7.8
>DQ855492-1|ABH88179.1| 251|Tribolium castaneum chemosensory
protein 6 protein.
Length = 251
Score = 25.8 bits (54), Expect = 0.28
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = -1
Query: 250 TSTLPLTDNPSTSPTSLTRTVTNPREAICPP 158
T T T PST PT+ VT P +A PP
Sbjct: 172 TLTTKFTTKPSTKPTNKPVVVTKPPQA--PP 200
Score = 24.2 bits (50), Expect = 0.84
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = -1
Query: 388 SNPATTSPLKATSNSTTRPATEFTPRLKVPSRTSTQNTP 272
SN +++PL T+++TTR T T + T N P
Sbjct: 153 SNVISSTPLPPTTSTTTR--TTLTTKFTTKPSTKPTNKP 189
>AF017415-1|AAB70262.1| 343|Tribolium castaneum abdominal-AII
protein.
Length = 343
Score = 23.8 bits (49), Expect = 1.1
Identities = 9/25 (36%), Positives = 17/25 (68%)
Frame = -1
Query: 388 SNPATTSPLKATSNSTTRPATEFTP 314
S+P+ +SP ++S+++T PA P
Sbjct: 38 SSPSGSSPQHSSSSASTSPAARMYP 62
>AF017414-1|AAB70260.1| 209|Tribolium castaneum abdominal-AII
protein.
Length = 209
Score = 23.8 bits (49), Expect = 1.1
Identities = 9/25 (36%), Positives = 17/25 (68%)
Frame = -1
Query: 388 SNPATTSPLKATSNSTTRPATEFTP 314
S+P+ +SP ++S+++T PA P
Sbjct: 38 SSPSGSSPQHSSSSASTSPAARMYP 62
>AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 23.0 bits (47), Expect = 1.9
Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 3/54 (5%)
Frame = -1
Query: 373 TSPLKATSNSTTRPATEFTPR-LKVP--SRTSTQNTPPSKLRVPTSTLPLTDNP 221
TSPL +++ +PAT T + L P S +ST +T + S + NP
Sbjct: 144 TSPLSVSTSPPGKPATSTTSQNLSSPASSTSSTSSTEKAGTNNNNSKSSQSSNP 197
>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
Length = 2700
Score = 21.8 bits (44), Expect = 4.5
Identities = 17/53 (32%), Positives = 22/53 (41%)
Frame = -1
Query: 376 TTSPLKATSNSTTRPATEFTPRLKVPSRTSTQNTPPSKLRVPTSTLPLTDNPS 218
TT+ T+++TTRP T P T PP P +P D PS
Sbjct: 1060 TTTTRPTTTSTTTRPTTTNWP-------TQGTTIPP-----PAVVMPEVDKPS 1100
>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
adhesion molecule splicevariant 3.12.3.1 protein.
Length = 1639
Score = 21.8 bits (44), Expect = 4.5
Identities = 13/40 (32%), Positives = 19/40 (47%)
Frame = -3
Query: 257 GAYKYTSPDGQPIDLAYVADENGYQPQGSHLPTPHPIPEA 138
G KYT+ + LAY + +G + H T +PEA
Sbjct: 1166 GLKKYTNYSMEV--LAYTSGGDGVRTTPIHCQTEQDVPEA 1203
>AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 21.8 bits (44), Expect = 4.5
Identities = 14/58 (24%), Positives = 27/58 (46%)
Frame = -1
Query: 373 TSPLKATSNSTTRPATEFTPRLKVPSRTSTQNTPPSKLRVPTSTLPLTDNPSTSPTSL 200
TSPL +++ +PAT T + S S+ ++ S + T+ S++P +
Sbjct: 144 TSPLSVSTSPPGKPATS-TASQNLSSPASSTSSTSSTEKAGTNNNNSKSGQSSNPPQI 200
>AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax
protein.
Length = 230
Score = 21.8 bits (44), Expect = 4.5
Identities = 14/58 (24%), Positives = 27/58 (46%)
Frame = -1
Query: 373 TSPLKATSNSTTRPATEFTPRLKVPSRTSTQNTPPSKLRVPTSTLPLTDNPSTSPTSL 200
TSPL +++ +PAT T + S S+ ++ S + T+ S++P +
Sbjct: 144 TSPLSVSTSPPGKPATS-TASQNLSSPASSTSSTSSTEKAGTNNNNSKSGQSSNPPQI 200
>AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 21.8 bits (44), Expect = 4.5
Identities = 14/58 (24%), Positives = 27/58 (46%)
Frame = -1
Query: 373 TSPLKATSNSTTRPATEFTPRLKVPSRTSTQNTPPSKLRVPTSTLPLTDNPSTSPTSL 200
TSPL +++ +PAT T + S S+ ++ S + T+ S++P +
Sbjct: 144 TSPLSVSTSPPGKPATS-TASQNLSSPASSTSSTSSTEKAGTNNNNSKSGQSSNPPQI 200
>AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax
protein.
Length = 297
Score = 21.8 bits (44), Expect = 4.5
Identities = 14/58 (24%), Positives = 27/58 (46%)
Frame = -1
Query: 373 TSPLKATSNSTTRPATEFTPRLKVPSRTSTQNTPPSKLRVPTSTLPLTDNPSTSPTSL 200
TSPL +++ +PAT T + S S+ ++ S + T+ S++P +
Sbjct: 144 TSPLSVSTSPPGKPATS-TASQNLSSPASSTSSTSSTEKAGTNNNNSKSGQSSNPPQI 200
>AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax
protein.
Length = 268
Score = 21.8 bits (44), Expect = 4.5
Identities = 14/58 (24%), Positives = 27/58 (46%)
Frame = -1
Query: 373 TSPLKATSNSTTRPATEFTPRLKVPSRTSTQNTPPSKLRVPTSTLPLTDNPSTSPTSL 200
TSPL +++ +PAT T + S S+ ++ S + T+ S++P +
Sbjct: 100 TSPLSVSTSPPGKPATS-TASQNLSSPASSTSSTSSTEKAGTNNNNSKSGQSSNPPQI 156
>AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein.
Length = 312
Score = 21.8 bits (44), Expect = 4.5
Identities = 14/58 (24%), Positives = 27/58 (46%)
Frame = -1
Query: 373 TSPLKATSNSTTRPATEFTPRLKVPSRTSTQNTPPSKLRVPTSTLPLTDNPSTSPTSL 200
TSPL +++ +PAT T + S S+ ++ S + T+ S++P +
Sbjct: 144 TSPLSVSTSPPGKPATS-TASQNLSSPASSTSSTSSTEKAGTNNNNSKSGQSSNPPQI 200
>AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduced
Scr protein.
Length = 312
Score = 21.8 bits (44), Expect = 4.5
Identities = 14/58 (24%), Positives = 27/58 (46%)
Frame = -1
Query: 373 TSPLKATSNSTTRPATEFTPRLKVPSRTSTQNTPPSKLRVPTSTLPLTDNPSTSPTSL 200
TSPL +++ +PAT T + S S+ ++ S + T+ S++P +
Sbjct: 144 TSPLSVSTSPPGKPATS-TASQNLSSPASSTSSTSSTEKAGTNNNNSKSGQSSNPPQI 200
>AJ457831-1|CAD29886.1| 249|Tribolium castaneum helix-loop-helix
transcription factor protein.
Length = 249
Score = 21.4 bits (43), Expect = 5.9
Identities = 12/45 (26%), Positives = 16/45 (35%)
Frame = -3
Query: 218 DLAYVADENGYQPQGSHLPTPHPIPEAIARALAYIEAHPPSPSVV 84
D+A V G P +P P + A Y + P P V
Sbjct: 183 DIALVLPTQGASPLPLLVPIPQRTASTASSASNYSPSQSPEPESV 227
>AJ223627-1|CAA11500.1| 371|Tribolium castaneum orthodenticle-1
protein protein.
Length = 371
Score = 21.0 bits (42), Expect = 7.8
Identities = 8/15 (53%), Positives = 9/15 (60%)
Frame = -2
Query: 126 SCLHRGPPPQPLRRG 82
SCL PPP+ RG
Sbjct: 32 SCLKTTPPPEEDNRG 46
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 122,368
Number of Sequences: 336
Number of extensions: 2612
Number of successful extensions: 21
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14935063
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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