Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_pT_C19
         (364 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly pro...    23   1.1  
DQ855484-1|ABH88171.1|  130|Apis mellifera chemosensory protein ...    21   3.4  
DQ435331-1|ABD92646.1|  135|Apis mellifera OBP14 protein.              21   3.4  
AJ973401-1|CAJ01448.1|  130|Apis mellifera hypothetical protein ...    21   3.4  
AF481963-1|AAN59784.1|  130|Apis mellifera antennal-specific pro...    21   3.4  
DQ325090-1|ABD14104.1|  178|Apis mellifera complementary sex det...    21   5.9  
AY569705-1|AAS86658.1|  419|Apis mellifera complementary sex det...    20   7.8  
AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive...    20   7.8  

>DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly
           protein 9 protein.
          Length = 423

 Score = 23.0 bits (47), Expect = 1.1
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = +3

Query: 216 KWNHNSFITNVRNQG 260
           +WN  +F+T +RN G
Sbjct: 72  RWNGKTFVTILRNDG 86


>DQ855484-1|ABH88171.1|  130|Apis mellifera chemosensory protein 3
           protein.
          Length = 130

 Score = 21.4 bits (43), Expect = 3.4
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -1

Query: 100 ECKICFD*ERSCLKKI 53
           +CK C D +R  +KK+
Sbjct: 75  DCKKCTDKQREVIKKV 90


>DQ435331-1|ABD92646.1|  135|Apis mellifera OBP14 protein.
          Length = 135

 Score = 21.4 bits (43), Expect = 3.4
 Identities = 9/37 (24%), Positives = 20/37 (54%)
 Frame = +1

Query: 250 ETKVGNLLEKTLQIFVYEMQLFIYCIILNVIITQCNS 360
           + K  +++E  + +   ++QL+  CI+ N  I   N+
Sbjct: 41  QQKANDVIEGNIDVEDKKVQLYCECILKNFNILDKNN 77


>AJ973401-1|CAJ01448.1|  130|Apis mellifera hypothetical protein
           protein.
          Length = 130

 Score = 21.4 bits (43), Expect = 3.4
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -1

Query: 100 ECKICFD*ERSCLKKI 53
           +CK C D +R  +KK+
Sbjct: 75  DCKKCTDKQREVIKKV 90


>AF481963-1|AAN59784.1|  130|Apis mellifera antennal-specific
           protein 3c precursor protein.
          Length = 130

 Score = 21.4 bits (43), Expect = 3.4
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -1

Query: 100 ECKICFD*ERSCLKKI 53
           +CK C D +R  +KK+
Sbjct: 75  DCKKCTDKQREVIKKV 90


>DQ325090-1|ABD14104.1|  178|Apis mellifera complementary sex
           determiner protein.
          Length = 178

 Score = 20.6 bits (41), Expect = 5.9
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -2

Query: 342 NHVQYNTINKQLHFIN 295
           N+  YN  NK+L++ N
Sbjct: 93  NYNNYNNYNKKLYYKN 108


>AY569705-1|AAS86658.1|  419|Apis mellifera complementary sex
           determiner protein.
          Length = 419

 Score = 20.2 bits (40), Expect = 7.8
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -2

Query: 342 NHVQYNTINKQLHFIN 295
           N+  YN  NK+L++ N
Sbjct: 334 NNNNYNNYNKKLYYKN 349


>AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive
           opsin protein.
          Length = 371

 Score = 20.2 bits (40), Expect = 7.8
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = +1

Query: 283 LQIFVYEMQLFIYCIILNVII 345
           ++IFV  +  F YCI + +II
Sbjct: 208 IRIFVATIFTFSYCIPMILII 228


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,787
Number of Sequences: 438
Number of extensions: 1691
Number of successful extensions: 11
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  8556345
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)