Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P17_pT_C12
(730 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z79755-6|CAB02104.1| 192|Caenorhabditis elegans Hypothetical pr... 123 2e-28
AF169201-2|AAF01679.1| 192|Caenorhabditis elegans CPN-1 protein. 123 2e-28
AF040641-1|AAB94947.2| 203|Caenorhabditis elegans Calponin prot... 90 1e-18
U97013-5|AAB52338.1| 142|Caenorhabditis elegans Calponin protei... 86 3e-17
AF039711-7|AAB96713.3| 154|Caenorhabditis elegans Calponin prot... 81 8e-16
Z92781-5|CAB07179.2| 1391|Caenorhabditis elegans Hypothetical pr... 54 8e-08
U39645-2|AAA80365.2| 638|Caenorhabditis elegans Hypothetical pr... 43 2e-04
U23520-5|AAC46554.4| 975|Caenorhabditis elegans Mammalian vav (... 42 5e-04
U23520-4|ABB88236.1| 1007|Caenorhabditis elegans Mammalian vav (... 42 5e-04
DQ136172-1|AAZ66767.1| 1007|Caenorhabditis elegans VAV-1 protein. 42 5e-04
U64856-6|AAB04989.1| 406|Caenorhabditis elegans Hypothetical pr... 36 0.039
U04712-3|AAA81903.1| 357|Caenorhabditis elegans unc-87 protein. 34 0.091
U04712-2|AAA81902.1| 565|Caenorhabditis elegans unc-87 protein. 34 0.091
U04712-1|AAA81901.1| 374|Caenorhabditis elegans unc-87 protein. 34 0.091
U04711-2|AAA81900.1| 357|Caenorhabditis elegans unc-87 protein. 34 0.091
U04711-1|AAA81899.1| 374|Caenorhabditis elegans unc-87 protein. 34 0.091
AF106590-6|AAT68897.1| 544|Caenorhabditis elegans Uncoordinated... 34 0.091
AF106590-5|AAC78234.1| 565|Caenorhabditis elegans Uncoordinated... 34 0.091
AF106590-4|AAK68303.1| 374|Caenorhabditis elegans Uncoordinated... 34 0.091
AF067619-2|AAC17566.2| 202|Caenorhabditis elegans Hypothetical ... 34 0.091
AF100673-5|AAC69000.1| 1084|Caenorhabditis elegans Hypothetical ... 33 0.21
AF067619-3|AAV28340.1| 153|Caenorhabditis elegans Hypothetical ... 33 0.28
Z82264-10|CAB54196.1| 384|Caenorhabditis elegans Hypothetical p... 30 1.5
AL110479-29|CAB60311.2| 1044|Caenorhabditis elegans Hypothetical... 30 1.9
Z70306-3|CAA94325.1| 318|Caenorhabditis elegans Hypothetical pr... 29 2.6
Z68750-1|CAA92963.1| 284|Caenorhabditis elegans Hypothetical pr... 29 3.4
U64856-5|AAT81185.1| 301|Caenorhabditis elegans Hypothetical pr... 29 3.4
AY157938-1|AAN35200.1| 1751|Caenorhabditis elegans ANC-1 protein. 29 3.4
AC006834-1|AAF40010.3| 8545|Caenorhabditis elegans Abnormal nucl... 29 3.4
Z79601-5|CAB01882.1| 450|Caenorhabditis elegans Hypothetical pr... 29 4.5
Z66561-7|CAB54206.2| 419|Caenorhabditis elegans Hypothetical pr... 29 4.5
AF304127-1|AAG50240.1| 419|Caenorhabditis elegans innexin protein. 29 4.5
U28734-1|AAB52603.2| 397|Caenorhabditis elegans Hypothetical pr... 28 7.9
AF003151-2|AAK18919.3| 277|Caenorhabditis elegans Prion-like-(q... 28 7.9
>Z79755-6|CAB02104.1| 192|Caenorhabditis elegans Hypothetical
protein F43G9.9 protein.
Length = 192
Score = 123 bits (296), Expect = 2e-28
Identities = 74/183 (40%), Positives = 107/183 (58%), Gaps = 4/183 (2%)
Frame = -2
Query: 684 SLETRFRLYTMPARNKDQEQEVLTWISDVLGEPLPNGAYED----VLRDGVILCKLANKL 517
+LE + ++Y +K+ E+L W+ +V G+ D V +DG +LC LAN L
Sbjct: 16 ALEAQQKIYEK--YDKNLAGEILQWVQNVTGQSFDTQGDADNLVKVFQDGSLLCTLANSL 73
Query: 516 APGSVKKIQERGTNFQLMENIQRFQAAIKKYGVPEEEIFQTADLFERRNIPQVTLCLYAL 337
PGSVKK+ F+ MENI F ++Y V + E+FQT DL+E ++ V +CL +L
Sbjct: 74 KPGSVKKVNTSAMAFKKMENISFFLKFAEEY-VQKSELFQTVDLYEGQDPNAVLICLASL 132
Query: 336 GRITQKHPEFTGPQLGPKMADKNERTFTEEQLRAHNAELNLQMGFNKGASQSGHGGFGNT 157
R ++K+ F LGPK A + R +T+EQL+A + + LQMG NKGA+ SG GNT
Sbjct: 133 ARKSEKN--FGRSGLGPKEAQGDRREWTDEQLKAGHNVIGLQMGSNKGATASGL-NMGNT 189
Query: 156 RHM 148
RHM
Sbjct: 190 RHM 192
>AF169201-2|AAF01679.1| 192|Caenorhabditis elegans CPN-1 protein.
Length = 192
Score = 123 bits (296), Expect = 2e-28
Identities = 74/183 (40%), Positives = 107/183 (58%), Gaps = 4/183 (2%)
Frame = -2
Query: 684 SLETRFRLYTMPARNKDQEQEVLTWISDVLGEPLPNGAYED----VLRDGVILCKLANKL 517
+LE + ++Y +K+ E+L W+ +V G+ D V +DG +LC LAN L
Sbjct: 16 ALEAQQKIYEK--YDKNLAGEILQWVQNVTGQSFDTQGDADNLVKVFQDGSLLCTLANSL 73
Query: 516 APGSVKKIQERGTNFQLMENIQRFQAAIKKYGVPEEEIFQTADLFERRNIPQVTLCLYAL 337
PGSVKK+ F+ MENI F ++Y V + E+FQT DL+E ++ V +CL +L
Sbjct: 74 KPGSVKKVNTSAMAFKKMENISFFLKFAEEY-VQKSELFQTVDLYEGQDPNAVLICLASL 132
Query: 336 GRITQKHPEFTGPQLGPKMADKNERTFTEEQLRAHNAELNLQMGFNKGASQSGHGGFGNT 157
R ++K+ F LGPK A + R +T+EQL+A + + LQMG NKGA+ SG GNT
Sbjct: 133 ARKSEKN--FGRSGLGPKEAQGDRREWTDEQLKAGHNVIGLQMGSNKGATASGL-NMGNT 189
Query: 156 RHM 148
RHM
Sbjct: 190 RHM 192
>AF040641-1|AAB94947.2| 203|Caenorhabditis elegans Calponin protein
2 protein.
Length = 203
Score = 90.2 bits (214), Expect = 1e-18
Identities = 61/169 (36%), Positives = 83/169 (49%), Gaps = 10/169 (5%)
Frame = -2
Query: 624 EVLTWISDVLGEPLP--------NGAYEDVLRDGVILCKLANKLAPGS-VKKIQERGTNF 472
EVL WI +V GE + ++L+DGV+LCKL KL P V ++ F
Sbjct: 29 EVLKWIENVTGERFSFDVTTCESSTDVSNLLKDGVMLCKLIEKLDPSCRVVYNKKPKMAF 88
Query: 471 QLMENIQRFQAAIKKYGVPEEEIFQTADLFERRNIPQVTLCLYALGRITQ-KHPEFTGPQ 295
+MENI F AA K++GV E FQT DL+E + +V CL L + Q + P
Sbjct: 89 PMMENISNFLAAAKQFGVMEISCFQTVDLYENKQCYKVIECLRLLAAVAQSRSSHLEHPA 148
Query: 294 LGPKMADKNERTFTEEQLRAHNAELNLQMGFNKGASQSGHGGFGNTRHM 148
K+A + R F E +R + LQ G NK ASQ G +G R +
Sbjct: 149 WVVKLAQSSPRQFPEAVMRRGEMVIPLQYGTNKCASQKGMSPYGLPRQI 197
>U97013-5|AAB52338.1| 142|Caenorhabditis elegans Calponin protein 3
protein.
Length = 142
Score = 85.8 bits (203), Expect = 3e-17
Identities = 44/105 (41%), Positives = 62/105 (59%), Gaps = 4/105 (3%)
Frame = -2
Query: 621 VLTWISDVLGEPLPNGAYED----VLRDGVILCKLANKLAPGSVKKIQERGTNFQLMENI 454
+L WI + GE + D +L+DG +LCK AN + GS+KK+Q+ + F MENI
Sbjct: 30 LLEWIKKLSGENISTSGERDNFHNLLKDGTLLCKAANGIEAGSIKKVQKPISTFACMENI 89
Query: 453 QRFQAAIKKYGVPEEEIFQTADLFERRNIPQVTLCLYALGRITQK 319
F KK GVP EE FQ+ +L E R++ V + L +LGR+ QK
Sbjct: 90 NAFVEFAKKQGVPNEETFQSVELVEGRDLFSVCVTLLSLGRVLQK 134
>AF039711-7|AAB96713.3| 154|Caenorhabditis elegans Calponin protein
4 protein.
Length = 154
Score = 81.0 bits (191), Expect = 8e-16
Identities = 43/105 (40%), Positives = 62/105 (59%), Gaps = 4/105 (3%)
Frame = -2
Query: 621 VLTWISDVLGEPLPNGA----YEDVLRDGVILCKLANKLAPGSVKKIQERGTNFQLMENI 454
+L WI D+ E A + + L+DG LCKL N + GSVKKI + +NF +ENI
Sbjct: 33 LLEWIRDLTKEDFDCEASRDNFREQLKDGQRLCKLVNAIKAGSVKKIMKPISNFNCLENI 92
Query: 453 QRFQAAIKKYGVPEEEIFQTADLFERRNIPQVTLCLYALGRITQK 319
+F A + GV +EE FQ+ DLF+ R++ VT+ L +L R +K
Sbjct: 93 NQFSTAARSLGVKDEETFQSVDLFDGRDLFSVTVTLQSLARKVEK 137
>Z92781-5|CAB07179.2| 1391|Caenorhabditis elegans Hypothetical
protein F09C3.1 protein.
Length = 1391
Score = 54.4 bits (125), Expect = 8e-08
Identities = 37/117 (31%), Positives = 64/117 (54%), Gaps = 14/117 (11%)
Frame = -2
Query: 627 QEVLTWISDVLGEP--LPNGAYEDVLRDGVILCKLANKLAPGSV----------KKIQER 484
+EV TW+S+ L + +P E+ LR+GV+L +L N AP V +K ++
Sbjct: 49 EEVRTWLSECLNDDTLVPTTDLEENLRNGVLLARLGNSFAPEVVPEKGIFDIRQEKYRQN 108
Query: 483 GTN--FQLMENIQRFQAAIKKYGVPEEEIFQTADLFERRNIPQVTLCLYALGRITQK 319
++ +NI +++ A++ +PE I +TAD+FE RN+ V CL+AL + +
Sbjct: 109 DATPVYRHSDNIMQWRRAMESVRLPEIFIPETADVFEGRNMKTV-FCLFALATLLHR 164
>U39645-2|AAA80365.2| 638|Caenorhabditis elegans Hypothetical
protein C14F11.2 protein.
Length = 638
Score = 43.2 bits (97), Expect = 2e-04
Identities = 24/82 (29%), Positives = 37/82 (45%), Gaps = 3/82 (3%)
Frame = -2
Query: 558 LRDGVILCKLANKLAPGSVKKIQERGTNFQLME---NIQRFQAAIKKYGVPEEEIFQTAD 388
L DG LCK NKL P S+ ++ N+ RF +K GVPE + D
Sbjct: 548 LSDGQELCKFINKLHPESISLASSTDSSIATTRSKMNVDRFLQYCRKIGVPETTLCSQMD 607
Query: 387 LFERRNIPQVTLCLYALGRITQ 322
+ +RN +V + + ++ Q
Sbjct: 608 IISKRNPQKVARTVLTVAKLQQ 629
>U23520-5|AAC46554.4| 975|Caenorhabditis elegans Mammalian vav
(oncogene) relatedprotein 1, isoform a protein.
Length = 975
Score = 41.9 bits (94), Expect = 5e-04
Identities = 25/76 (32%), Positives = 38/76 (50%), Gaps = 5/76 (6%)
Frame = -2
Query: 570 YEDVLRDGVILCKLANKLAPGSV--KKIQ--ERGTNFQLMENIQRFQAAIKKY-GVPEEE 406
+ VLRDG++LC+LAN L P + KKI + + F NI F K Y + + +
Sbjct: 32 FASVLRDGILLCRLANTLVPNGIDQKKIMRTNQPSPFLCCNNINYFAMFCKTYFNLEDAD 91
Query: 405 IFQTADLFERRNIPQV 358
+F DL+ +V
Sbjct: 92 LFTAEDLYYMNGFQKV 107
>U23520-4|ABB88236.1| 1007|Caenorhabditis elegans Mammalian vav
(oncogene) relatedprotein 1, isoform b protein.
Length = 1007
Score = 41.9 bits (94), Expect = 5e-04
Identities = 25/76 (32%), Positives = 38/76 (50%), Gaps = 5/76 (6%)
Frame = -2
Query: 570 YEDVLRDGVILCKLANKLAPGSV--KKIQ--ERGTNFQLMENIQRFQAAIKKY-GVPEEE 406
+ VLRDG++LC+LAN L P + KKI + + F NI F K Y + + +
Sbjct: 64 FASVLRDGILLCRLANTLVPNGIDQKKIMRTNQPSPFLCCNNINYFAMFCKTYFNLEDAD 123
Query: 405 IFQTADLFERRNIPQV 358
+F DL+ +V
Sbjct: 124 LFTAEDLYYMNGFQKV 139
>DQ136172-1|AAZ66767.1| 1007|Caenorhabditis elegans VAV-1 protein.
Length = 1007
Score = 41.9 bits (94), Expect = 5e-04
Identities = 25/76 (32%), Positives = 38/76 (50%), Gaps = 5/76 (6%)
Frame = -2
Query: 570 YEDVLRDGVILCKLANKLAPGSV--KKIQ--ERGTNFQLMENIQRFQAAIKKY-GVPEEE 406
+ VLRDG++LC+LAN L P + KKI + + F NI F K Y + + +
Sbjct: 64 FASVLRDGILLCRLANTLVPNGIDQKKIMRTNQPSPFLCCNNINYFAMFCKTYFNLEDAD 123
Query: 405 IFQTADLFERRNIPQV 358
+F DL+ +V
Sbjct: 124 LFTAEDLYYMNGFQKV 139
>U64856-6|AAB04989.1| 406|Caenorhabditis elegans Hypothetical
protein T25F10.6a protein.
Length = 406
Score = 35.5 bits (78), Expect = 0.039
Identities = 19/41 (46%), Positives = 24/41 (58%)
Frame = -2
Query: 255 TEEQLRAHNAELNLQMGFNKGASQSGHGGFGNTRHM*TASK 133
T +Q R ++LQMG NK A+Q+G GFG RH T K
Sbjct: 230 TNDQDRDSQGFIHLQMGTNKFANQAGMTGFGMPRHNITKYK 270
Score = 29.9 bits (64), Expect = 1.9
Identities = 16/33 (48%), Positives = 20/33 (60%)
Frame = -2
Query: 252 EEQLRAHNAELNLQMGFNKGASQSGHGGFGNTR 154
EE+ RA + + LQ G NK ASQ+G G G R
Sbjct: 191 EEKARASDGIVPLQSGTNKLASQAGMTGIGMPR 223
Score = 29.1 bits (62), Expect = 3.4
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = -2
Query: 255 TEEQLRAHNAELNLQMGFNKGASQSGHGGFGNTR 154
T+E+L + +Q G NK ASQ G GFG R
Sbjct: 92 TKEKLMRSEGIIPIQAGSNKYASQKGMTGFGVPR 125
Score = 29.1 bits (62), Expect = 3.4
Identities = 18/45 (40%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = -2
Query: 285 KMADKNERTFTEEQLRAH-NAELNLQMGFNKGASQSGHGGFGNTR 154
K+ N T+E+ A+ LQ G NK ASQ G GFG R
Sbjct: 130 KVKSDNLAEITDEKKIANLKGSTWLQSGTNKFASQKGQSGFGAVR 174
>U04712-3|AAA81903.1| 357|Caenorhabditis elegans unc-87 protein.
Length = 357
Score = 34.3 bits (75), Expect = 0.091
Identities = 20/51 (39%), Positives = 25/51 (49%)
Frame = -2
Query: 306 TGPQLGPKMADKNERTFTEEQLRAHNAELNLQMGFNKGASQSGHGGFGNTR 154
TG + KM D + E + +E+ LQ G NK ASQ G GFG R
Sbjct: 150 TGRRETTKMVDSKHPEYDHE--KPDQSEIPLQSGTNKFASQKGMTGFGTAR 198
Score = 30.3 bits (65), Expect = 1.5
Identities = 17/44 (38%), Positives = 21/44 (47%)
Frame = -2
Query: 285 KMADKNERTFTEEQLRAHNAELNLQMGFNKGASQSGHGGFGNTR 154
KM D N ++ E + QMG N+ ASQ G GFG R
Sbjct: 203 KMVDSNHPDYSHE-CSIDQTTIPSQMGSNQYASQKGMTGFGQPR 245
>U04712-2|AAA81902.1| 565|Caenorhabditis elegans unc-87 protein.
Length = 565
Score = 34.3 bits (75), Expect = 0.091
Identities = 20/51 (39%), Positives = 25/51 (49%)
Frame = -2
Query: 306 TGPQLGPKMADKNERTFTEEQLRAHNAELNLQMGFNKGASQSGHGGFGNTR 154
TG + KM D + E + +E+ LQ G NK ASQ G GFG R
Sbjct: 358 TGRRETTKMVDSKHPEYDHE--KPDQSEIPLQSGTNKFASQKGMTGFGTAR 406
Score = 30.3 bits (65), Expect = 1.5
Identities = 17/44 (38%), Positives = 21/44 (47%)
Frame = -2
Query: 285 KMADKNERTFTEEQLRAHNAELNLQMGFNKGASQSGHGGFGNTR 154
KM D N ++ E + QMG N+ ASQ G GFG R
Sbjct: 411 KMVDSNHPDYSHE-CSIDQTTIPSQMGSNQYASQKGMTGFGQPR 453
>U04712-1|AAA81901.1| 374|Caenorhabditis elegans unc-87 protein.
Length = 374
Score = 34.3 bits (75), Expect = 0.091
Identities = 20/51 (39%), Positives = 25/51 (49%)
Frame = -2
Query: 306 TGPQLGPKMADKNERTFTEEQLRAHNAELNLQMGFNKGASQSGHGGFGNTR 154
TG + KM D + E + +E+ LQ G NK ASQ G GFG R
Sbjct: 167 TGRRETTKMVDSKHPEYDHE--KPDQSEIPLQSGTNKFASQKGMTGFGTAR 215
Score = 30.3 bits (65), Expect = 1.5
Identities = 17/44 (38%), Positives = 21/44 (47%)
Frame = -2
Query: 285 KMADKNERTFTEEQLRAHNAELNLQMGFNKGASQSGHGGFGNTR 154
KM D N ++ E + QMG N+ ASQ G GFG R
Sbjct: 220 KMVDSNHPDYSHE-CSIDQTTIPSQMGSNQYASQKGMTGFGQPR 262
>U04711-2|AAA81900.1| 357|Caenorhabditis elegans unc-87 protein.
Length = 357
Score = 34.3 bits (75), Expect = 0.091
Identities = 20/51 (39%), Positives = 25/51 (49%)
Frame = -2
Query: 306 TGPQLGPKMADKNERTFTEEQLRAHNAELNLQMGFNKGASQSGHGGFGNTR 154
TG + KM D + E + +E+ LQ G NK ASQ G GFG R
Sbjct: 150 TGRRETTKMVDSKHPEYDHE--KPDQSEIPLQSGTNKFASQKGMTGFGTAR 198
Score = 30.3 bits (65), Expect = 1.5
Identities = 17/44 (38%), Positives = 21/44 (47%)
Frame = -2
Query: 285 KMADKNERTFTEEQLRAHNAELNLQMGFNKGASQSGHGGFGNTR 154
KM D N ++ E + QMG N+ ASQ G GFG R
Sbjct: 203 KMVDSNHPDYSHE-CSIDQTTIPSQMGSNQYASQKGMTGFGQPR 245
>U04711-1|AAA81899.1| 374|Caenorhabditis elegans unc-87 protein.
Length = 374
Score = 34.3 bits (75), Expect = 0.091
Identities = 20/51 (39%), Positives = 25/51 (49%)
Frame = -2
Query: 306 TGPQLGPKMADKNERTFTEEQLRAHNAELNLQMGFNKGASQSGHGGFGNTR 154
TG + KM D + E + +E+ LQ G NK ASQ G GFG R
Sbjct: 167 TGRRETTKMVDSKHPEYDHE--KPDQSEIPLQSGTNKFASQKGMTGFGTAR 215
Score = 30.3 bits (65), Expect = 1.5
Identities = 17/44 (38%), Positives = 21/44 (47%)
Frame = -2
Query: 285 KMADKNERTFTEEQLRAHNAELNLQMGFNKGASQSGHGGFGNTR 154
KM D N ++ E + QMG N+ ASQ G GFG R
Sbjct: 220 KMVDSNHPDYSHE-CSIDQTTIPSQMGSNQYASQKGMTGFGQPR 262
>AF106590-6|AAT68897.1| 544|Caenorhabditis elegans Uncoordinated
protein 87, isoform c protein.
Length = 544
Score = 34.3 bits (75), Expect = 0.091
Identities = 20/51 (39%), Positives = 25/51 (49%)
Frame = -2
Query: 306 TGPQLGPKMADKNERTFTEEQLRAHNAELNLQMGFNKGASQSGHGGFGNTR 154
TG + KM D + E + +E+ LQ G NK ASQ G GFG R
Sbjct: 337 TGRRETTKMVDSKHPEYDHE--KPDQSEIPLQSGTNKFASQKGMTGFGTAR 385
Score = 30.3 bits (65), Expect = 1.5
Identities = 17/44 (38%), Positives = 21/44 (47%)
Frame = -2
Query: 285 KMADKNERTFTEEQLRAHNAELNLQMGFNKGASQSGHGGFGNTR 154
KM D N ++ E + QMG N+ ASQ G GFG R
Sbjct: 390 KMVDSNHPDYSHE-CSIDQTTIPSQMGSNQYASQKGMTGFGQPR 432
>AF106590-5|AAC78234.1| 565|Caenorhabditis elegans Uncoordinated
protein 87, isoform a protein.
Length = 565
Score = 34.3 bits (75), Expect = 0.091
Identities = 20/51 (39%), Positives = 25/51 (49%)
Frame = -2
Query: 306 TGPQLGPKMADKNERTFTEEQLRAHNAELNLQMGFNKGASQSGHGGFGNTR 154
TG + KM D + E + +E+ LQ G NK ASQ G GFG R
Sbjct: 358 TGRRETTKMVDSKHPEYDHE--KPDQSEIPLQSGTNKFASQKGMTGFGTAR 406
Score = 30.3 bits (65), Expect = 1.5
Identities = 17/44 (38%), Positives = 21/44 (47%)
Frame = -2
Query: 285 KMADKNERTFTEEQLRAHNAELNLQMGFNKGASQSGHGGFGNTR 154
KM D N ++ E + QMG N+ ASQ G GFG R
Sbjct: 411 KMVDSNHPDYSHE-CSIDQTTIPSQMGSNQYASQKGMTGFGQPR 453
>AF106590-4|AAK68303.1| 374|Caenorhabditis elegans Uncoordinated
protein 87, isoform b protein.
Length = 374
Score = 34.3 bits (75), Expect = 0.091
Identities = 20/51 (39%), Positives = 25/51 (49%)
Frame = -2
Query: 306 TGPQLGPKMADKNERTFTEEQLRAHNAELNLQMGFNKGASQSGHGGFGNTR 154
TG + KM D + E + +E+ LQ G NK ASQ G GFG R
Sbjct: 167 TGRRETTKMVDSKHPEYDHE--KPDQSEIPLQSGTNKFASQKGMTGFGTAR 215
Score = 30.3 bits (65), Expect = 1.5
Identities = 17/44 (38%), Positives = 21/44 (47%)
Frame = -2
Query: 285 KMADKNERTFTEEQLRAHNAELNLQMGFNKGASQSGHGGFGNTR 154
KM D N ++ E + QMG N+ ASQ G GFG R
Sbjct: 220 KMVDSNHPDYSHE-CSIDQTTIPSQMGSNQYASQKGMTGFGQPR 262
>AF067619-2|AAC17566.2| 202|Caenorhabditis elegans Hypothetical
protein K03E5.2a protein.
Length = 202
Score = 34.3 bits (75), Expect = 0.091
Identities = 19/50 (38%), Positives = 28/50 (56%)
Frame = -2
Query: 279 ADKNERTFTEEQLRAHNAELNLQMGFNKGASQSGHGGFGNTRHM*TASKF 130
AD +++ EEQ + +A + LQ G N+ SQ G GFG R+ T +F
Sbjct: 79 ADHDKQWLIEEQKQYSDAIVRLQSGTNQFESQKGKTGFGMPRNTQTKVEF 128
Score = 29.9 bits (64), Expect = 1.9
Identities = 18/43 (41%), Positives = 23/43 (53%)
Frame = -2
Query: 258 FTEEQLRAHNAELNLQMGFNKGASQSGHGGFGNTRHM*TASKF 130
+T QLR +A + LQ G N+ SQ G GFG R+ T F
Sbjct: 36 WTLRQLRQTDAMVPLQSGTNQFDSQRGKTGFGMPRNTQTKVDF 78
Score = 28.3 bits (60), Expect = 5.9
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = -2
Query: 237 AHNAELNLQMGFNKGASQSGHGGFGNTR 154
AH++ + LQ G N+ SQ G GFG R
Sbjct: 142 AHDSIVRLQSGTNQYESQKGMTGFGTPR 169
>AF100673-5|AAC69000.1| 1084|Caenorhabditis elegans Hypothetical
protein Y66H1B.3 protein.
Length = 1084
Score = 33.1 bits (72), Expect = 0.21
Identities = 22/68 (32%), Positives = 38/68 (55%), Gaps = 3/68 (4%)
Frame = -2
Query: 642 NKDQ--EQEVLTWISDVL-GEPLPNGAYEDVLRDGVILCKLANKLAPGSVKKIQERGTNF 472
NK++ +Q++L WI + L G P+ N + DGV L L N +APG+++ + N
Sbjct: 147 NKEETPKQKLLNWIRNRLPGMPISN--FTSDWNDGVALGALVNSMAPGALEDWENWSPN- 203
Query: 471 QLMENIQR 448
+EN ++
Sbjct: 204 DALENTEK 211
>AF067619-3|AAV28340.1| 153|Caenorhabditis elegans Hypothetical
protein K03E5.2b protein.
Length = 153
Score = 32.7 bits (71), Expect = 0.28
Identities = 17/42 (40%), Positives = 24/42 (57%)
Frame = -2
Query: 279 ADKNERTFTEEQLRAHNAELNLQMGFNKGASQSGHGGFGNTR 154
AD +++ EEQ + +A + LQ G N+ SQ G GFG R
Sbjct: 79 ADHDKQWLIEEQKQYSDAIVRLQSGTNQFESQKGMTGFGTPR 120
Score = 29.9 bits (64), Expect = 1.9
Identities = 18/43 (41%), Positives = 23/43 (53%)
Frame = -2
Query: 258 FTEEQLRAHNAELNLQMGFNKGASQSGHGGFGNTRHM*TASKF 130
+T QLR +A + LQ G N+ SQ G GFG R+ T F
Sbjct: 36 WTLRQLRQTDAMVPLQSGTNQFDSQRGKTGFGMPRNTQTKVDF 78
>Z82264-10|CAB54196.1| 384|Caenorhabditis elegans Hypothetical
protein C49C3.10 protein.
Length = 384
Score = 30.3 bits (65), Expect = 1.5
Identities = 15/63 (23%), Positives = 28/63 (44%)
Frame = -2
Query: 567 EDVLRDGVILCKLANKLAPGSVKKIQERGTNFQLMENIQRFQAAIKKYGVPEEEIFQTAD 388
+D + +++ + P ++ E NF L N+ ++QA I Y + +FQ
Sbjct: 228 KDHIDQFILMVQFLGNAGPSFYSQMNEHARNFLLRYNLDQYQAPINFYSRFPDTVFQGVL 287
Query: 387 LFE 379
FE
Sbjct: 288 QFE 290
>AL110479-29|CAB60311.2| 1044|Caenorhabditis elegans Hypothetical
protein Y105C5B.2 protein.
Length = 1044
Score = 29.9 bits (64), Expect = 1.9
Identities = 17/43 (39%), Positives = 25/43 (58%)
Frame = +2
Query: 464 MSWKLVPLSCIFFTDPGANLLANLQRITPSLSTSSYAPFGSGS 592
M W+ VPL I F D G +L A+ + T S + +SY+ SG+
Sbjct: 440 MPWR-VPLDSISFDDNGGSLSASRRVSTISTARASYSSIFSGN 481
>Z70306-3|CAA94325.1| 318|Caenorhabditis elegans Hypothetical
protein C06G8.4 protein.
Length = 318
Score = 29.5 bits (63), Expect = 2.6
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = -2
Query: 99 FVHGRIWLNDFFTFKIILPITL 34
F+ GRIW+N F F I +P +
Sbjct: 253 FILGRIWINPIFEFSIFVPTVI 274
>Z68750-1|CAA92963.1| 284|Caenorhabditis elegans Hypothetical
protein K01A6.4 protein.
Length = 284
Score = 29.1 bits (62), Expect = 3.4
Identities = 13/45 (28%), Positives = 21/45 (46%)
Frame = -2
Query: 297 QLGPKMADKNERTFTEEQLRAHNAELNLQMGFNKGASQSGHGGFG 163
Q G + + ++ +++ Q GF G+SQ G GGFG
Sbjct: 35 QSGQRQTGQGQQVGSQQGFGGMQGGFGGQSGFGGGSSQGGFGGFG 79
>U64856-5|AAT81185.1| 301|Caenorhabditis elegans Hypothetical
protein T25F10.6b protein.
Length = 301
Score = 29.1 bits (62), Expect = 3.4
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = -2
Query: 255 TEEQLRAHNAELNLQMGFNKGASQSGHGGFGNTR 154
T+E+L + +Q G NK ASQ G GFG R
Sbjct: 92 TKEKLMRSEGIIPIQAGSNKYASQKGMTGFGVPR 125
>AY157938-1|AAN35200.1| 1751|Caenorhabditis elegans ANC-1 protein.
Length = 1751
Score = 29.1 bits (62), Expect = 3.4
Identities = 22/64 (34%), Positives = 31/64 (48%), Gaps = 3/64 (4%)
Frame = -2
Query: 699 PAQEXSLETRFRLYTMPARNKDQEQEVLTWISDVLGEPLPNGAYEDV---LRDGVILCKL 529
PA+ + RFR + K Q+ WI+ L E +G ED+ +RDGV+LC L
Sbjct: 6 PARPCCVCFRFRPHE---DEKAQKNTFTRWINFHLEEHSSSGRIEDLFEDIRDGVLLCHL 62
Query: 528 ANKL 517
L
Sbjct: 63 IEVL 66
Score = 28.3 bits (60), Expect = 5.9
Identities = 22/87 (25%), Positives = 40/87 (45%), Gaps = 4/87 (4%)
Frame = -2
Query: 666 RLYTMPARNKDQEQEVLTWISDVLGEPLPNGAYEDV---LRDGVILCKLANKLAPGSVKK 496
+L P + + EQ L WI+ +G+ + E++ RDG++ C L ++ P +
Sbjct: 214 KLTAQPVK-QSVEQVFLRWINAEIGDLVGGRRVENMDKQWRDGILFCALVSRWRPDVIS- 271
Query: 495 IQERGTNFQLMENIQ-RFQAAIKKYGV 418
TN +N++ F A + GV
Sbjct: 272 -MREVTNANPRDNLELAFNLAHQHLGV 297
>AC006834-1|AAF40010.3| 8545|Caenorhabditis elegans Abnormal nuclear
anchorage protein1 protein.
Length = 8545
Score = 29.1 bits (62), Expect = 3.4
Identities = 22/64 (34%), Positives = 31/64 (48%), Gaps = 3/64 (4%)
Frame = -2
Query: 699 PAQEXSLETRFRLYTMPARNKDQEQEVLTWISDVLGEPLPNGAYEDV---LRDGVILCKL 529
PA+ + RFR + K Q+ WI+ L E +G ED+ +RDGV+LC L
Sbjct: 6 PARPCCVCFRFRPHE---DEKAQKNTFTRWINFHLEEHSSSGRIEDLFEDIRDGVLLCHL 62
Query: 528 ANKL 517
L
Sbjct: 63 IEVL 66
Score = 28.3 bits (60), Expect = 5.9
Identities = 22/87 (25%), Positives = 40/87 (45%), Gaps = 4/87 (4%)
Frame = -2
Query: 666 RLYTMPARNKDQEQEVLTWISDVLGEPLPNGAYEDV---LRDGVILCKLANKLAPGSVKK 496
+L P + + EQ L WI+ +G+ + E++ RDG++ C L ++ P +
Sbjct: 214 KLTAQPVK-QSVEQVFLRWINAEIGDLVGGRRVENMDKQWRDGILFCALVSRWRPDVIS- 271
Query: 495 IQERGTNFQLMENIQ-RFQAAIKKYGV 418
TN +N++ F A + GV
Sbjct: 272 -MREVTNANPRDNLELAFNLAHQHLGV 297
>Z79601-5|CAB01882.1| 450|Caenorhabditis elegans Hypothetical
protein K09A9.3 protein.
Length = 450
Score = 28.7 bits (61), Expect = 4.5
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = -2
Query: 123 IFSTLISVFVHGRIWLNDFFTFKIILPITL 34
+ +T+I ++V WL FFT II I L
Sbjct: 133 VITTMIFIYVETSTWLTGFFTLTIITIIVL 162
>Z66561-7|CAB54206.2| 419|Caenorhabditis elegans Hypothetical
protein F08G12.10 protein.
Length = 419
Score = 28.7 bits (61), Expect = 4.5
Identities = 14/59 (23%), Positives = 27/59 (45%)
Frame = +1
Query: 397 LEYFFFWYSVFLDCRLEPLNVLHELEVGPSLLYFFH*SRSQFVGQFAKDHTVPKHVFVC 573
+ YF ++C L+ + + H L+V FFH +F G K+ ++ + +C
Sbjct: 184 INYFLLKLGFIVNCILQMVLLKHFLDVDDYFWGFFHLWNVEFKGTAEKEDSIFPRIVLC 242
>AF304127-1|AAG50240.1| 419|Caenorhabditis elegans innexin protein.
Length = 419
Score = 28.7 bits (61), Expect = 4.5
Identities = 14/59 (23%), Positives = 27/59 (45%)
Frame = +1
Query: 397 LEYFFFWYSVFLDCRLEPLNVLHELEVGPSLLYFFH*SRSQFVGQFAKDHTVPKHVFVC 573
+ YF ++C L+ + + H L+V FFH +F G K+ ++ + +C
Sbjct: 184 INYFLLKLGFIVNCILQMVLLKHFLDVDDYFWGFFHLWNVEFKGTAEKEDSIFPRIVLC 242
>U28734-1|AAB52603.2| 397|Caenorhabditis elegans Hypothetical
protein C53C9.2 protein.
Length = 397
Score = 27.9 bits (59), Expect = 7.9
Identities = 16/35 (45%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = -2
Query: 252 EEQLRAHNAEL-NLQMGFNKGASQSGHGGFGNTRH 151
EE+L+ + + LQ G NK ASQ G GFG R+
Sbjct: 244 EEELKQKSEGIVPLQSGTNKLASQRGMTGFGTPRN 278
>AF003151-2|AAK18919.3| 277|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 24
protein.
Length = 277
Score = 27.9 bits (59), Expect = 7.9
Identities = 21/75 (28%), Positives = 30/75 (40%), Gaps = 1/75 (1%)
Frame = -2
Query: 534 KLANKLAPGSVKK-IQERGTNFQLMENIQRFQAAIKKYGVPEEEIFQTADLFERRNIPQV 358
K NK KK I +RG QL ++ ++ K VP+E + + E IP V
Sbjct: 193 KWTNKQVEDMFKKSIDDRGDEIQLEDDFKKIDKNYKTQSVPQESLRTLSARKEVEKIPFV 252
Query: 357 TLCLYALGRITQKHP 313
+G T P
Sbjct: 253 AGKSSGVGAKTTASP 267
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,849,825
Number of Sequences: 27780
Number of extensions: 441249
Number of successful extensions: 1224
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 1126
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1217
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1718929214
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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