Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_pT_C09
         (743 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q6B8P9 Cluster: Hypothetical plastid protein; n=1; Grac...    39   0.11 
UniRef50_Q86AV7 Cluster: Similar to Dictyostelium discoideum (Sl...    35   2.4  
UniRef50_Q8EVF3 Cluster: Amino acid permeases; n=1; Mycoplasma p...    33   7.4  
UniRef50_Q5CTP2 Cluster: Putative uncharacterized protein; n=2; ...    33   7.4  
UniRef50_P93666 Cluster: Leucine-rich-repeat protein; n=1; Helia...    33   9.8  
UniRef50_A7QCL2 Cluster: Chromosome chr12 scaffold_78, whole gen...    33   9.8  
UniRef50_A6YTE0 Cluster: Melon resistance protein-like protein; ...    33   9.8  
UniRef50_Q5A7N7 Cluster: Possible filamentous growth protein; n=...    33   9.8  

>UniRef50_Q6B8P9 Cluster: Hypothetical plastid protein; n=1;
           Gracilaria tenuistipitata var. liui|Rep: Hypothetical
           plastid protein - Gracilaria tenuistipitata var. liui
           (Red alga)
          Length = 220

 Score = 39.1 bits (87), Expect = 0.11
 Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
 Frame = +1

Query: 466 YS*LQKYKKYINILFKKNITLPQNFLKCDRIFNVITILSLI--YKWRSIRIKSVQNMRAT 639
           Y  L+   K++  LFKK + LP+N+L  D I N I    ++  Y W SI   ++ N    
Sbjct: 132 YKKLKICSKFLEKLFKKQLGLPKNYLLIDSIINKIHAWYVLQGYHWSSI---NIYNKHKA 188

Query: 640 STHHLPASIGRVERL 684
           +  H+  + G++ R+
Sbjct: 189 NEMHIVINEGKIYRI 203


>UniRef50_Q86AV7 Cluster: Similar to Dictyostelium discoideum (Slime
           mold). Hypothetical 58.0 kDa protein; n=3; Dictyostelium
           discoideum|Rep: Similar to Dictyostelium discoideum
           (Slime mold). Hypothetical 58.0 kDa protein -
           Dictyostelium discoideum (Slime mold)
          Length = 531

 Score = 34.7 bits (76), Expect = 2.4
 Identities = 19/55 (34%), Positives = 33/55 (60%), Gaps = 3/55 (5%)
 Frame = -1

Query: 638 VALIFCTDLILIDRHLYINDKIVITL--NILSHFKKF-CGRVMFFLKRIFIYFLY 483
           ++ +FC DL L+ ++LY+ D+++ TL   + SHFK+     V+F  + I   F Y
Sbjct: 385 LSTLFCHDLSLLRQYLYVIDRLIETLLPKLFSHFKEIGVTPVLFASEWISTLFTY 439


>UniRef50_Q8EVF3 Cluster: Amino acid permeases; n=1; Mycoplasma
           penetrans|Rep: Amino acid permeases - Mycoplasma
           penetrans
          Length = 567

 Score = 33.1 bits (72), Expect = 7.4
 Identities = 25/83 (30%), Positives = 40/83 (48%), Gaps = 2/83 (2%)
 Frame = -1

Query: 725 IGLGVTLLRMSRVLSLSTRPMEAGR*CVDVALI--FCTDLILIDRHLYINDKIVITLNIL 552
           IG G+   + S VLSLS   +     C  +A I      L L++     ND     L+++
Sbjct: 51  IGAGI-FFKSSSVLSLSQSSLVLAIFCWVIAAISVIAMALALVEISSARNDN----LSLI 105

Query: 551 SHFKKFCGRVMFFLKRIFIYFLY 483
              K FCG+ MF   + F++++Y
Sbjct: 106 GWAKVFCGKTMFKASKNFMFYIY 128


>UniRef50_Q5CTP2 Cluster: Putative uncharacterized protein; n=2;
           Cryptosporidium|Rep: Putative uncharacterized protein -
           Cryptosporidium parvum Iowa II
          Length = 284

 Score = 33.1 bits (72), Expect = 7.4
 Identities = 15/43 (34%), Positives = 24/43 (55%)
 Frame = +1

Query: 475 LQKYKKYINILFKKNITLPQNFLKCDRIFNVITILSLIYKWRS 603
           +  +K  INI++ K+I+  QNF K   +  VI +L  I  + S
Sbjct: 145 MDNFKDEINIIYSKSISAVQNFFKISSMSEVINLLEYILNFLS 187


>UniRef50_P93666 Cluster: Leucine-rich-repeat protein; n=1;
           Helianthus annuus|Rep: Leucine-rich-repeat protein -
           Helianthus annuus (Common sunflower)
          Length = 540

 Score = 32.7 bits (71), Expect = 9.8
 Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 6/79 (7%)
 Frame = +1

Query: 481 KYKKYINILFKKNITLPQNFLKC------DRIFNVITILSLIYKWRSIRIKSVQNMRATS 642
           ++ +++N+   K  +LP    KC      D  FN IT L     +  I +K +  M   +
Sbjct: 280 QHLQFLNVSRNKLTSLPDGICKCRSLLELDASFNQITYLPANIGYGLINLKKLI-MPLNN 338

Query: 643 THHLPASIGRVERLRTLDI 699
              LP SIG +  L+ LD+
Sbjct: 339 VRSLPTSIGEMISLQVLDV 357


>UniRef50_A7QCL2 Cluster: Chromosome chr12 scaffold_78, whole genome
           shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
           chr12 scaffold_78, whole genome shotgun sequence - Vitis
           vinifera (Grape)
          Length = 1072

 Score = 32.7 bits (71), Expect = 9.8
 Identities = 17/44 (38%), Positives = 28/44 (63%)
 Frame = +1

Query: 568 ITILSLIYKWRSIRIKSVQNMRATSTHHLPASIGRVERLRTLDI 699
           + + +++ KWR +R+ S++  R T    LP SIG ++ LR LDI
Sbjct: 529 VDLHAILSKWRYLRVLSLRFYRLTD---LPDSIGELKYLRYLDI 569


>UniRef50_A6YTE0 Cluster: Melon resistance protein-like protein;
           n=23; eurosids I|Rep: Melon resistance protein-like
           protein - Cucumis melo (Muskmelon)
          Length = 1312

 Score = 32.7 bits (71), Expect = 9.8
 Identities = 21/56 (37%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
 Frame = -1

Query: 641 DVALIFCTDLILIDRHLY-INDKIVITLNILSHFKKFCGRVMFFLKRIFIYFLYFC 477
           ++ LI CT+L +ID+ L+ +N+ IV+ L+  S+ KKF  R  F L  +    L +C
Sbjct: 557 ELYLINCTNLGMIDKSLFSLNNLIVLNLDGCSNLKKF-PRGYFMLSSLKELRLSYC 611


>UniRef50_Q5A7N7 Cluster: Possible filamentous growth protein; n=1;
           Candida albicans|Rep: Possible filamentous growth
           protein - Candida albicans (Yeast)
          Length = 675

 Score = 32.7 bits (71), Expect = 9.8
 Identities = 22/92 (23%), Positives = 48/92 (52%), Gaps = 5/92 (5%)
 Frame = +1

Query: 478 QKYKKYINILFKKNITLPQNFLKCDRIFNVITILSLIYK--WRSIRIKSVQNMRA---TS 642
           Q   K ++IL ++   LP+N    D+ FN+  +  L  K  W+ +  +++++++     S
Sbjct: 275 QHLAKMLDILIREQGILPRNLSIMDKNFNLQLLFHLFAKSGWKLLNFQNLESLKIGINCS 334

Query: 643 THHLPASIGRVERLRTLDILSSVTPKPILYLL 738
             +  A +   ++L+ L+I+  V+ K  L L+
Sbjct: 335 IKYGHALLNMFKKLKALEIVILVSEKSSLDLI 366


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 646,557,578
Number of Sequences: 1657284
Number of extensions: 12298858
Number of successful extensions: 26572
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 25059
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26528
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 60911752460
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)