Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_pT_C09
         (743 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.           25   0.84 
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    25   0.84 
AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    23   2.0  
AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory recept...    23   3.4  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    22   4.5  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    22   4.5  
AY052394-1|AAL15468.1|  228|Tribolium castaneum tryptophan oxyge...    21   7.9  
AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan oxyge...    21   7.9  
AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan oxyge...    21   7.9  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    21   7.9  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    21   7.9  

>AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.
          Length = 253

 Score = 24.6 bits (51), Expect = 0.84
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = +1

Query: 607 RIKSVQNMRATSTHHLPASI 666
           R+K V N  AT   H+PAS+
Sbjct: 97  RVKQVNNGFATLRQHIPASV 116


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 24.6 bits (51), Expect = 0.84
 Identities = 8/11 (72%), Positives = 10/11 (90%)
 Frame = -3

Query: 306 YCANYYLIVIT 274
           YC NYY+IV+T
Sbjct: 76  YCFNYYVIVVT 86


>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 14/30 (46%), Positives = 16/30 (53%)
 Frame = +2

Query: 425 LSLRLTKTKDSFGVILNYKNTKNI*IFFLK 514
           L L L  T  + G+I N  N K I IFF K
Sbjct: 73  LDLYLGITIQTLGIISNCINAKQITIFFDK 102


>AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory receptor
           candidate 17 protein.
          Length = 372

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +1

Query: 301 TIFKVLWSFVTTETVIMYLFITLE 372
           TI + +W F    +   YLFI L+
Sbjct: 332 TITRTMWYFQICGSAFSYLFIMLQ 355


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = -3

Query: 573 RNYIKYSVTFQKVLWQSNVFF 511
           R YI++ V F KV+    VFF
Sbjct: 50  RTYIEWGVKFLKVVTIITVFF 70


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = -3

Query: 573 RNYIKYSVTFQKVLWQSNVFF 511
           R YI++ V F KV+    VFF
Sbjct: 50  RTYIEWGVKFLKVVTIITVFF 70


>AY052394-1|AAL15468.1|  228|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 228

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = +1

Query: 565 VITILSLIYKWRSIRIKSVQNMRATS 642
           ++ I SLI KWR   +  VQ M  +S
Sbjct: 135 LMDIDSLITKWRYNHVLMVQRMIGSS 160


>AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = +1

Query: 565 VITILSLIYKWRSIRIKSVQNMRATS 642
           ++ I SLI KWR   +  VQ M  +S
Sbjct: 295 LMDIDSLITKWRYNHVLMVQRMIGSS 320


>AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = +1

Query: 565 VITILSLIYKWRSIRIKSVQNMRATS 642
           ++ I SLI KWR   +  VQ M  +S
Sbjct: 295 LMDIDSLITKWRYNHVLMVQRMIGSS 320


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 5/22 (22%), Positives = 13/22 (59%)
 Frame = -1

Query: 539 KFCGRVMFFLKRIFIYFLYFCN 474
           K+C  ++ F   +F+  +Y+ +
Sbjct: 320 KYCNFIILFYLSVFVILVYYAS 341


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +1

Query: 301 TIFKVLWSFVTTETVIM 351
           T+F V   ++TTE V+M
Sbjct: 174 TVFNVAQCYLTTELVLM 190


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 166,750
Number of Sequences: 336
Number of extensions: 3728
Number of successful extensions: 18
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 19819879
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)