Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P17_pT_C09
(743 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_06_0763 - 27101764-27104017,27104523-27105055,27106403-27106993 31 0.73
11_02_0007 + 7283080-7283918,7284526-7285764,7286317-7286376,728... 31 1.3
10_08_0573 + 18872720-18872781,18873261-18873610,18873917-188743... 30 1.7
07_03_1154 - 24402550-24405073,24405909-24406330,24407318-24408856 30 1.7
06_01_0169 - 1346281-1349188,1350069-1350184 30 1.7
01_03_0147 - 13125065-13126679,13126802-13127664 30 1.7
06_01_0455 - 3241217-3243176,3244426-3244670,3244869-3245255 30 2.2
12_01_0862 + 8161117-8163913,8164000-8164019 29 2.9
04_01_0106 + 1102880-1105691,1105781-1105806 29 2.9
01_05_0227 - 19512866-19514983 29 2.9
01_01_1169 + 9313135-9313332,9313496-9314229,9314933-9317036 29 2.9
01_01_1106 + 8750597-8754031 29 2.9
11_06_0337 - 22454281-22456399,22458520-22459388 29 3.9
11_04_0311 + 16232961-16233079,16235135-16237080,16237246-16237370 29 5.2
06_01_1196 + 10289708-10289823,10290828-10291541,10291614-102920... 29 5.2
06_01_1129 + 9326975-9327071,9327174-9327306,9327408-9327479,932... 29 5.2
12_02_0720 - 22510996-22512949,22513752-22514533 28 6.8
12_02_0272 - 16634765-16635004,16635412-16635457,16636107-166380... 28 6.8
04_03_0190 + 12448027-12450825 28 6.8
01_06_0763 + 31800556-31800618,31800659-31800802,31800859-318009... 28 6.8
01_06_0221 - 27653591-27653724,27654270-27654473,27655216-276553... 28 6.8
12_02_0723 - 22532379-22532902,22533060-22533135,22533195-225333... 28 9.0
12_02_0534 - 20103908-20105897,20106314-20107116 28 9.0
11_01_0783 - 6554140-6554400,6554742-6556491,6556531-6556844 28 9.0
08_02_1221 - 25371247-25371387,25371472-25372385,25372675-25373350 28 9.0
08_01_0601 - 5268520-5271112,5272448-5272950 28 9.0
07_03_0670 + 20562188-20562923,20564288-20564826,20564967-205654... 28 9.0
06_01_0454 - 3234331-3236299,3237254-3238074 28 9.0
05_03_0416 + 13684604-13688050 28 9.0
>11_06_0763 - 27101764-27104017,27104523-27105055,27106403-27106993
Length = 1125
Score = 31.5 bits (68), Expect = 0.73
Identities = 17/53 (32%), Positives = 30/53 (56%)
Frame = +1
Query: 541 LKCDRIFNVITILSLIYKWRSIRIKSVQNMRATSTHHLPASIGRVERLRTLDI 699
L ++N+ + S I + + ++ V+N TS LP+ IG ++ LRTLD+
Sbjct: 775 LDVSNMWNISELPSQIGELKHLQTLDVRN---TSVRELPSQIGELKHLRTLDV 824
Score = 29.5 bits (63), Expect = 2.9
Identities = 20/75 (26%), Positives = 37/75 (49%), Gaps = 5/75 (6%)
Frame = +1
Query: 490 KYINILFKKNITLPQNFLKCDRIFNVITILSLIYK---WRSIRIKSVQNM--RATSTHHL 654
KY+ + + LPQ K ++ ++ + S + W +K ++ + R T L
Sbjct: 704 KYLGLKGTRITKLPQEIQKLKQL-EILYVRSTGIEELPWEIGELKQLRTLDVRNTRISEL 762
Query: 655 PASIGRVERLRTLDI 699
P+ IG ++ LRTLD+
Sbjct: 763 PSQIGELKHLRTLDV 777
>11_02_0007 +
7283080-7283918,7284526-7285764,7286317-7286376,
7287469-7287610
Length = 759
Score = 30.7 bits (66), Expect = 1.3
Identities = 16/35 (45%), Positives = 24/35 (68%), Gaps = 3/35 (8%)
Frame = +1
Query: 637 TSTHHLPASIGRVERLRTLDILSSVT---PKPILY 732
TS LPA IG++E L+TLD+ S++ P+ IL+
Sbjct: 615 TSIDSLPAQIGKLEYLQTLDVRSTLVRRLPESILH 649
>10_08_0573 +
18872720-18872781,18873261-18873610,18873917-18874334,
18875172-18877180,18877390-18877398,18880291-18880398,
18880399-18880469,18880769-18881785
Length = 1347
Score = 30.3 bits (65), Expect = 1.7
Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = +1
Query: 562 NVITILSLIY-KWRSIRIKSVQNMRATSTHHLPASIGRVERLRTLDIL 702
N+I I+ WRS+ + +R H+P +GR+ LR L+I+
Sbjct: 818 NIIASGEFIWGSWRSLSCLTSITLRKLPMEHIPPGLGRLRFLRHLEII 865
>07_03_1154 - 24402550-24405073,24405909-24406330,24407318-24408856
Length = 1494
Score = 30.3 bits (65), Expect = 1.7
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = +1
Query: 625 NMRATSTHHLPASIGRVERLRTLDI 699
N+R T LPA IG +++L TLDI
Sbjct: 1146 NLRRTHITELPAQIGNLKKLETLDI 1170
>06_01_0169 - 1346281-1349188,1350069-1350184
Length = 1007
Score = 30.3 bits (65), Expect = 1.7
Identities = 13/37 (35%), Positives = 23/37 (62%)
Frame = +1
Query: 598 RSIRIKSVQNMRATSTHHLPASIGRVERLRTLDILSS 708
R +R + R ++ + LP+SIG+++ L+ LDI S
Sbjct: 603 RHLRYLNTHTRRRSTIYALPSSIGKLQNLQVLDIRES 639
>01_03_0147 - 13125065-13126679,13126802-13127664
Length = 825
Score = 30.3 bits (65), Expect = 1.7
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +1
Query: 625 NMRATSTHHLPASIGRVERLRTLDILSS 708
N+R T LPA IG + L TLD+ S+
Sbjct: 615 NLRGTDVSELPAQIGELRCLETLDVRST 642
>06_01_0455 - 3241217-3243176,3244426-3244670,3244869-3245255
Length = 863
Score = 29.9 bits (64), Expect = 2.2
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = +1
Query: 625 NMRATSTHHLPASIGRVERLRTLDILSS 708
++ T LPA+IGR++ L TLDIL +
Sbjct: 544 SISGTGVSVLPANIGRLQHLETLDILDT 571
>12_01_0862 + 8161117-8163913,8164000-8164019
Length = 938
Score = 29.5 bits (63), Expect = 2.9
Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = +1
Query: 628 MRATSTHHLPASIGRVERLRTLDI-LSSVTPKP 723
+R T LP SI R++ LRTLDI L+ + P
Sbjct: 612 LRRTKIKQLPESIDRLQNLRTLDIFLTEIASLP 644
>04_01_0106 + 1102880-1105691,1105781-1105806
Length = 945
Score = 29.5 bits (63), Expect = 2.9
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = +1
Query: 628 MRATSTHHLPASIGRVERLRTLDI 699
+R T LP SI R++ LRTLDI
Sbjct: 616 LRRTKVKQLPESIDRLQNLRTLDI 639
>01_05_0227 - 19512866-19514983
Length = 705
Score = 29.5 bits (63), Expect = 2.9
Identities = 11/30 (36%), Positives = 23/30 (76%)
Frame = +1
Query: 610 IKSVQNMRATSTHHLPASIGRVERLRTLDI 699
+K++ ++ T +LP SIG++++LRTL++
Sbjct: 445 LKALHVIKCTRLANLPESIGKLKKLRTLEL 474
>01_01_1169 + 9313135-9313332,9313496-9314229,9314933-9317036
Length = 1011
Score = 29.5 bits (63), Expect = 2.9
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = +1
Query: 625 NMRATSTHHLPASIGRVERLRTLDI 699
++R T LP S+GR+++L TLD+
Sbjct: 685 SLRDTGVQRLPRSVGRLKQLMTLDV 709
>01_01_1106 + 8750597-8754031
Length = 1144
Score = 29.5 bits (63), Expect = 2.9
Identities = 13/35 (37%), Positives = 22/35 (62%)
Frame = +1
Query: 607 RIKSVQNMRATSTHHLPASIGRVERLRTLDILSSV 711
R V ++R + LP S+G+++ LR LD+ SS+
Sbjct: 424 RFLRVLDLRGSQIMELPQSVGKLKHLRYLDLSSSL 458
>11_06_0337 - 22454281-22456399,22458520-22459388
Length = 995
Score = 29.1 bits (62), Expect = 3.9
Identities = 14/34 (41%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Frame = +1
Query: 625 NMRATSTHHLPASIGRVERLRTLDIL-SSVTPKP 723
++R T H +P IG++E L LDI ++VT P
Sbjct: 624 SLRGTDIHKIPKKIGKLEYLEVLDIRDTNVTNLP 657
>11_04_0311 + 16232961-16233079,16235135-16237080,16237246-16237370
Length = 729
Score = 28.7 bits (61), Expect = 5.2
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = +1
Query: 625 NMRATSTHHLPASIGRVERLRTLDI 699
N+R T + +P+ IG++ L TLDI
Sbjct: 378 NLRGTDINSIPSKIGKLRYLETLDI 402
>06_01_1196 +
10289708-10289823,10290828-10291541,10291614-10292058,
10292329-10293642
Length = 862
Score = 28.7 bits (61), Expect = 5.2
Identities = 17/49 (34%), Positives = 29/49 (59%)
Frame = +1
Query: 562 NVITILSLIYKWRSIRIKSVQNMRATSTHHLPASIGRVERLRTLDILSS 708
N + + L+ + +RI N A+ + LP SIGR++ L+TLD+ S+
Sbjct: 480 NDVNNIVLLCHLKYLRIARYNN--ASYIYSLPKSIGRLDGLQTLDLDST 526
>06_01_1129 +
9326975-9327071,9327174-9327306,9327408-9327479,
9327593-9327736,9327950-9328021,9328219-9328278,
9328384-9328637,9329940-9330281,9332001-9332380,
9333867-9334235
Length = 640
Score = 28.7 bits (61), Expect = 5.2
Identities = 12/22 (54%), Positives = 17/22 (77%)
Frame = +1
Query: 643 THHLPASIGRVERLRTLDILSS 708
T +PA IGR+E L+TLD+ S+
Sbjct: 109 TGPIPAEIGRLENLKTLDLSSN 130
>12_02_0720 - 22510996-22512949,22513752-22514533
Length = 911
Score = 28.3 bits (60), Expect = 6.8
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +1
Query: 604 IRIKSVQNMRATSTHHLPASIGRVERLRTLDILSSVTPKP 723
+R+ + S LP SIG++E L TLDI + + P
Sbjct: 594 LRLLRFMRLGCYSATELPESIGKLESLETLDIRGARSRTP 633
>12_02_0272 -
16634765-16635004,16635412-16635457,16636107-16638098,
16639478-16640286
Length = 1028
Score = 28.3 bits (60), Expect = 6.8
Identities = 12/20 (60%), Positives = 16/20 (80%)
Frame = +1
Query: 652 LPASIGRVERLRTLDILSSV 711
LP IGR++ LRTLD+L S+
Sbjct: 605 LPQKIGRLQCLRTLDLLGSL 624
>04_03_0190 + 12448027-12450825
Length = 932
Score = 28.3 bits (60), Expect = 6.8
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = +1
Query: 628 MRATSTHHLPASIGRVERLRTLDI 699
+R T LP+S+GR+ L+TLD+
Sbjct: 614 LRRTKVKKLPSSLGRLANLQTLDL 637
>01_06_0763 +
31800556-31800618,31800659-31800802,31800859-31800980,
31801742-31801807,31801891-31801998,31802226-31802292,
31802716-31802800,31803169-31803329,31803490-31803591,
31803807-31804029,31804155-31804300
Length = 428
Score = 28.3 bits (60), Expect = 6.8
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = +1
Query: 544 KCDRIFNVITILSLIYKWRSIRIKSVQNMRATSTHHLPASI 666
+C F I+ S++ KWR K V+ + + HH P++I
Sbjct: 200 ECKTTFFNISASSIVSKWRGDSEKLVKVLFELARHHAPSTI 240
>01_06_0221 -
27653591-27653724,27654270-27654473,27655216-27655315,
27655728-27655888,27656846-27656930,27657548-27657614,
27658434-27658541,27658639-27658704,27659341-27659387,
27659497-27659691,27659833-27659877
Length = 403
Score = 28.3 bits (60), Expect = 6.8
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = +1
Query: 544 KCDRIFNVITILSLIYKWRSIRIKSVQNMRATSTHHLPASI 666
+C F I+ S++ KWR K V+ + + HH P++I
Sbjct: 186 ECKTTFFNISASSIVSKWRGDSEKLVKVLFELARHHAPSTI 226
>12_02_0723 -
22532379-22532902,22533060-22533135,22533195-22533380,
22533459-22534323,22534740-22534918,22535168-22535542
Length = 734
Score = 27.9 bits (59), Expect = 9.0
Identities = 18/47 (38%), Positives = 26/47 (55%)
Frame = +1
Query: 577 LSLIYKWRSIRIKSVQNMRATSTHHLPASIGRVERLRTLDILSSVTP 717
L+ + K R +R + + AT LP SIG++E L TLDI + P
Sbjct: 485 LNHLDKLRLLRFLRLGHYSATK---LPESIGKLESLETLDIRGARKP 528
>12_02_0534 - 20103908-20105897,20106314-20107116
Length = 930
Score = 27.9 bits (59), Expect = 9.0
Identities = 18/47 (38%), Positives = 26/47 (55%)
Frame = +1
Query: 577 LSLIYKWRSIRIKSVQNMRATSTHHLPASIGRVERLRTLDILSSVTP 717
L+ + K R +R + + AT LP SIG++E L TLDI + P
Sbjct: 605 LNHLDKLRLLRFLRLGHYSATE---LPESIGKLESLETLDIRGARKP 648
>11_01_0783 - 6554140-6554400,6554742-6556491,6556531-6556844
Length = 774
Score = 27.9 bits (59), Expect = 9.0
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +1
Query: 628 MRATSTHHLPASIGRVERLRTLDI 699
+R T LP SIG++ L TLDI
Sbjct: 589 LRRTKVKSLPESIGKLSNLHTLDI 612
>08_02_1221 - 25371247-25371387,25371472-25372385,25372675-25373350
Length = 576
Score = 27.9 bits (59), Expect = 9.0
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +1
Query: 625 NMRATSTHHLPASIGRVERLRTLDILSS 708
NMR LP+SIGR+ L LD+ S+
Sbjct: 325 NMRGNQLSSLPSSIGRLLNLEELDVGSN 352
>08_01_0601 - 5268520-5271112,5272448-5272950
Length = 1031
Score = 27.9 bits (59), Expect = 9.0
Identities = 10/21 (47%), Positives = 16/21 (76%)
Frame = +1
Query: 637 TSTHHLPASIGRVERLRTLDI 699
T+ HLP+S+ R+ L+TLD+
Sbjct: 695 TAMRHLPSSVKRLRNLQTLDV 715
>07_03_0670 +
20562188-20562923,20564288-20564826,20564967-20565458,
20566803-20567018
Length = 660
Score = 27.9 bits (59), Expect = 9.0
Identities = 13/44 (29%), Positives = 24/44 (54%)
Frame = +1
Query: 562 NVITILSLIYKWRSIRIKSVQNMRATSTHHLPASIGRVERLRTL 693
NVI + + +W +K V + +T H++ AS+G + L+ L
Sbjct: 245 NVIEMTQGLLQWNPTLVKEVDDSGSTPLHYV-ASVGNIPALKLL 287
>06_01_0454 - 3234331-3236299,3237254-3238074
Length = 929
Score = 27.9 bits (59), Expect = 9.0
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = +1
Query: 652 LPASIGRVERLRTLDILSS 708
LPA+IGR++ L TLDI S
Sbjct: 615 LPANIGRLQHLETLDIRGS 633
>05_03_0416 + 13684604-13688050
Length = 1148
Score = 27.9 bits (59), Expect = 9.0
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +1
Query: 610 IKSVQNMRATSTHHLPASIGRVERLRTLDILS 705
++S+Q +P SIGR+E LR L I S
Sbjct: 545 LQSLQLHSCNKLQGMPTSIGRIENLRVLHITS 576
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,144,126
Number of Sequences: 37544
Number of extensions: 279497
Number of successful extensions: 886
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 797
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 885
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1968901276
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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