Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P17_pT_C06
(682 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_1599 - 28022196-28022218,28022355-28022408,28022545-280226... 146 1e-35
03_02_1006 + 13150394-13150450,13150787-13150899,13152538-131527... 146 1e-35
08_02_1596 + 28125331-28125556,28125986-28126047,28126160-281261... 137 7e-33
03_02_0185 - 6239421-6239480,6239971-6240024,6240523-6240578,624... 132 3e-31
04_04_0863 + 28847761-28848009,28848108-28848131,28849388-288494... 52 4e-07
03_06_0167 - 32115770-32115886,32116388-32117102,32117178-321173... 35 0.069
11_06_0685 - 26272928-26273110,26273186-26273257,26273339-262734... 31 0.64
11_06_0459 + 23830204-23830350,23830419-23830592,23830738-238308... 31 0.64
11_06_0276 - 21826458-21826640,21826716-21826787,21826869-218269... 31 0.64
05_01_0088 + 581619-581854,581890-582035,583143-583263,583593-58... 31 0.64
03_06_0343 + 33274329-33274981,33275197-33276121 31 1.1
12_02_1170 - 26663491-26663602,26663999-26664104,26664613-266648... 30 2.0
05_06_0061 + 25274693-25274794,25274982-25275069,25275186-252752... 29 3.4
03_02_0561 + 9466428-9466502,9466503-9467243,9467592-9467600 29 4.5
11_04_0091 - 13392864-13392950,13393534-13393579,13393706-133938... 28 6.0
08_02_1005 + 23468230-23468994 28 6.0
11_03_0045 + 9253101-9253135,9253802-9253917,9255642-9256084 28 7.9
09_04_0188 - 15410310-15410514,15410597-15410748,15410845-154110... 28 7.9
03_01_0515 - 3864796-3865425 28 7.9
>07_03_1599 -
28022196-28022218,28022355-28022408,28022545-28022620,
28022727-28022758,28022921-28023016,28023105-28023206,
28023291-28023366
Length = 152
Score = 146 bits (355), Expect = 1e-35
Identities = 66/128 (51%), Positives = 86/128 (67%), Gaps = 1/128 (0%)
Frame = -2
Query: 483 RAIAVL-STETIRGNITFTQVQDGKVHVQGGITGLPPGEYGFHVHEKGDLSGGCLSTGSH 307
+A+AVL S+E ++G I F+Q DG V G ++GL PG +GFHVH GD + GC+STG H
Sbjct: 3 KAVAVLASSEGVKGTIFFSQEGDGPTSVTGSVSGLKPGLHGFHVHALGDTTNGCMSTGPH 62
Query: 306 FNPEHKDHGHPNDVNRHVGDLGNVVFDENHYSRIDLVDDQISLSGPHGIIGRAVVLHEKA 127
FNP K+HG P D NRH GDLGN+ + + +++ D QI L+G H IIGRAVV+H
Sbjct: 63 FNPTGKEHGAPQDENRHAGDLGNITAGADGVANVNVSDSQIPLTGAHSIIGRAVVVHADP 122
Query: 126 DDYGKSDH 103
DD GK H
Sbjct: 123 DDLGKGGH 130
Score = 35.5 bits (78), Expect = 0.039
Identities = 13/18 (72%), Positives = 17/18 (94%)
Frame = -3
Query: 95 TRKTGNAGGRVACGVIGI 42
++ TGNAGGRVACG+IG+
Sbjct: 133 SKTTGNAGGRVACGIIGL 150
>03_02_1006 +
13150394-13150450,13150787-13150899,13152538-13152709,
13153791-13153878,13153971-13154072,13154197-13154292,
13154547-13154578,13154727-13154802,13155264-13155317,
13155431-13155453
Length = 270
Score = 146 bits (354), Expect = 1e-35
Identities = 67/131 (51%), Positives = 86/131 (65%), Gaps = 1/131 (0%)
Frame = -2
Query: 492 TPSRAIAVL-STETIRGNITFTQVQDGKVHVQGGITGLPPGEYGFHVHEKGDLSGGCLST 316
T +A+ VL S+E ++G I F Q DG V G ++GL PG +GFH+H GD + GC+ST
Sbjct: 118 TMVKAVVVLGSSEIVKGTIHFVQEGDGPTTVTGSVSGLKPGLHGFHIHALGDTTNGCMST 177
Query: 315 GSHFNPEHKDHGHPNDVNRHVGDLGNVVFDENHYSRIDLVDDQISLSGPHGIIGRAVVLH 136
G H+NP K+HG P D RH GDLGNV E+ + I +VD QI L+GP+ IIGRAVV+H
Sbjct: 178 GPHYNPAGKEHGAPEDETRHAGDLGNVTAGEDGVANIHVVDSQIPLTGPNSIIGRAVVVH 237
Query: 135 EKADDYGKSDH 103
DD GK H
Sbjct: 238 ADPDDLGKGGH 248
Score = 35.5 bits (78), Expect = 0.039
Identities = 13/18 (72%), Positives = 17/18 (94%)
Frame = -3
Query: 95 TRKTGNAGGRVACGVIGI 42
++ TGNAGGRVACG+IG+
Sbjct: 251 SKTTGNAGGRVACGIIGL 268
>08_02_1596 +
28125331-28125556,28125986-28126047,28126160-28126199,
28126934-28127029,28127138-28127169,28127274-28127349,
28127430-28127483,28127916-28127941
Length = 203
Score = 137 bits (332), Expect = 7e-33
Identities = 63/128 (49%), Positives = 81/128 (63%), Gaps = 1/128 (0%)
Frame = -2
Query: 483 RAIAVLS-TETIRGNITFTQVQDGKVHVQGGITGLPPGEYGFHVHEKGDLSGGCLSTGSH 307
+A+AVL T + G +T TQ G V +TGL PG +GFH+HE GD + GC+STG H
Sbjct: 53 KAVAVLKGTSQVEGVVTLTQDDQGPTTVNVRVTGLTPGLHGFHLHEFGDTTNGCISTGPH 112
Query: 306 FNPEHKDHGHPNDVNRHVGDLGNVVFDENHYSRIDLVDDQISLSGPHGIIGRAVVLHEKA 127
FNP + HG P D RH GDLGN+V + + +VD QI LSGP+ ++GRA V+HE
Sbjct: 113 FNPNNLTHGAPEDEVRHAGDLGNIVANAEGVAEATIVDKQIPLSGPNSVVGRAFVVHELE 172
Query: 126 DDYGKSDH 103
DD GK H
Sbjct: 173 DDLGKGGH 180
Score = 33.5 bits (73), Expect = 0.16
Identities = 12/15 (80%), Positives = 15/15 (100%)
Frame = -3
Query: 86 TGNAGGRVACGVIGI 42
TGNAGGR+ACGV+G+
Sbjct: 186 TGNAGGRLACGVVGL 200
>03_02_0185 -
6239421-6239480,6239971-6240024,6240523-6240578,
6241108-6241183,6241276-6241307,6241421-6241516,
6242498-6242599,6242728-6242833
Length = 193
Score = 132 bits (318), Expect = 3e-31
Identities = 59/115 (51%), Positives = 77/115 (66%)
Frame = -2
Query: 435 FTQVQDGKVHVQGGITGLPPGEYGFHVHEKGDLSGGCLSTGSHFNPEHKDHGHPNDVNRH 256
F G V+G +TGL PG +GFH+H GD + GC STG HFNP +K HG P+D RH
Sbjct: 30 FQDPSTGYTEVRGRVTGLAPGLHGFHIHSFGDTTNGCNSTGPHFNPHNKSHGAPSDDERH 89
Query: 255 VGDLGNVVFDENHYSRIDLVDDQISLSGPHGIIGRAVVLHEKADDYGKSDHPDYQ 91
VGDLGN+V +++ + I + D QISLSGPH I+GRAVV+H +DD G+ + Q
Sbjct: 90 VGDLGNIVANKDGVADIFIKDLQISLSGPHSILGRAVVVHADSDDLGRGQKSNCQ 144
>04_04_0863 +
28847761-28848009,28848108-28848131,28849388-28849460,
28849550-28849684,28850191-28850411,28851747-28851983
Length = 312
Score = 52.0 bits (119), Expect = 4e-07
Identities = 35/121 (28%), Positives = 60/121 (49%)
Frame = -2
Query: 486 SRAIAVLSTETIRGNITFTQVQDGKVHVQGGITGLPPGEYGFHVHEKGDLSGGCLSTGSH 307
S A+A I G + QV V+ +GL PG++G+ ++E GDL+ G STG
Sbjct: 165 SAAVAEFKGPVIFGVVRLAQVNMELAIVEATFSGLSPGKHGWSINEFGDLTRGAESTGKV 224
Query: 306 FNPEHKDHGHPNDVNRHVGDLGNVVFDENHYSRIDLVDDQISLSGPHGIIGRAVVLHEKA 127
+NP D+ N+ +GDLG + E ++ +++ + +IGR++ L+
Sbjct: 225 YNP--SDYRS----NKPLGDLGTLEAGEKGEAQFSASKEKLKVV---DLIGRSIALYATE 275
Query: 126 D 124
D
Sbjct: 276 D 276
>03_06_0167 -
32115770-32115886,32116388-32117102,32117178-32117383,
32118094-32118138,32119047-32119109,32119726-32119749,
32120673-32120772,32120814-32120907,32121036-32121074,
32121605-32121668
Length = 488
Score = 34.7 bits (76), Expect = 0.069
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = -2
Query: 411 VHVQGGITGLPPGEYGFHVHEKGDLSGGCLSTG 313
+ V+ ++GL P +GFHVH G + GC+ G
Sbjct: 37 ITVKENVSGLKPVLHGFHVHALGGTTNGCMRNG 69
>11_06_0685 -
26272928-26273110,26273186-26273257,26273339-26273425,
26273566-26273655,26273741-26273785,26273872-26274054,
26274333-26274392,26274521-26274703,26274779-26274907,
26275083-26275380,26275454-26275608,26275791-26275929,
26276015-26276096,26276167-26276285,26276367-26276494,
26276640-26276813,26276882-26277028
Length = 757
Score = 31.5 bits (68), Expect = 0.64
Identities = 15/60 (25%), Positives = 29/60 (48%)
Frame = -2
Query: 240 NVVFDENHYSRIDLVDDQISLSGPHGIIGRAVVLHEKADDYGKSDHPDYQEDRQRWRSSR 61
N F N ++ V+D+ G H + +E +DDY ++H +++R RS++
Sbjct: 394 NYTFTPNEKLEMNYVNDKAEEFGQHNFQVKEEPKNESSDDYEMNNHRKTKKERSNMRSTK 453
>11_06_0459 +
23830204-23830350,23830419-23830592,23830738-23830865,
23830947-23831065,23831136-23831217,23831303-23831441,
23831624-23831778,23831852-23832149,23832325-23832453,
23832529-23832711,23832840-23832899,23832973-23833101,
23833177-23833359,23833446-23833490,23833576-23833665,
23833806-23833892,23833974-23834045,23834120-23834302
Length = 800
Score = 31.5 bits (68), Expect = 0.64
Identities = 15/60 (25%), Positives = 29/60 (48%)
Frame = -2
Query: 240 NVVFDENHYSRIDLVDDQISLSGPHGIIGRAVVLHEKADDYGKSDHPDYQEDRQRWRSSR 61
N F N ++ V+D+ G H + +E +DDY ++H +++R RS++
Sbjct: 394 NYTFTPNEKLEMNYVNDKAEEFGQHNFQVKEEPKNESSDDYEMNNHRKTKKERSNMRSTK 453
>11_06_0276 -
21826458-21826640,21826716-21826787,21826869-21826955,
21827096-21827185,21827271-21827315,21827402-21827584,
21827660-21827788,21827862-21827921,21828050-21828232,
21828308-21828436,21828612-21828909,21828983-21829137,
21829320-21829458,21829544-21829625,21829696-21829814,
21829896-21830023,21830169-21830342,21830411-21830557
Length = 800
Score = 31.5 bits (68), Expect = 0.64
Identities = 15/60 (25%), Positives = 29/60 (48%)
Frame = -2
Query: 240 NVVFDENHYSRIDLVDDQISLSGPHGIIGRAVVLHEKADDYGKSDHPDYQEDRQRWRSSR 61
N F N ++ V+D+ G H + +E +DDY ++H +++R RS++
Sbjct: 394 NYTFTPNEKLEMNYVNDKAEEFGQHNFQVKEEPKNESSDDYEMNNHRKTKKERSNMRSTK 453
>05_01_0088 +
581619-581854,581890-582035,583143-583263,583593-583773,
583842-584015,584161-584288,584370-584488,584559-584640,
584726-584864,585047-585201,585275-585572,585748-585876,
585952-586134,586263-586322,586396-586524,586600-586782,
586869-586913,586999-587088,587229-587315,587397-587468,
587813-587887
Length = 943
Score = 31.5 bits (68), Expect = 0.64
Identities = 15/60 (25%), Positives = 29/60 (48%)
Frame = -2
Query: 240 NVVFDENHYSRIDLVDDQISLSGPHGIIGRAVVLHEKADDYGKSDHPDYQEDRQRWRSSR 61
N F N ++ V+D+ G H + +E +DDY ++H +++R RS++
Sbjct: 573 NYTFTPNEKLEMNYVNDKAEEFGQHNFQVKEEPKNESSDDYEMNNHRKTKKERSNMRSTK 632
>03_06_0343 + 33274329-33274981,33275197-33276121
Length = 525
Score = 30.7 bits (66), Expect = 1.1
Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
Frame = -3
Query: 551 CFNSH--SWLRSLWRRLIMASPRRPALLPFYPQKRLEATSHLLRFKMGR 411
C SH S++ SLW ++ P+ L P+K+ E L FK G+
Sbjct: 226 CVRSHFRSYMCSLWTEVVFKHPKTFETLAMDPEKKREIIDDLDMFKNGK 274
>12_02_1170 -
26663491-26663602,26663999-26664104,26664613-26664816,
26664914-26665076,26665196-26665317,26665702-26665969
Length = 324
Score = 29.9 bits (64), Expect = 2.0
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = -1
Query: 574 SQRENKNXASTHIPGCDRSGDGSSWLHHAVPRYCR 470
S+ KN A+ + G D G SWL +PR R
Sbjct: 249 SRHSVKNGAADQLTGVDEEGHRLSWLTETIPRMLR 283
>05_06_0061 +
25274693-25274794,25274982-25275069,25275186-25275295,
25275542-25275605,25275713-25275777,25275864-25275929,
25276084-25276199,25276382-25276415
Length = 214
Score = 29.1 bits (62), Expect = 3.4
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +1
Query: 487 RRGEAMMSRRQSDRSQECELKXHFC 561
RRGE M+R+++ RS C LK C
Sbjct: 184 RRGETTMARKKTRRSTGCSLKNLMC 208
>03_02_0561 + 9466428-9466502,9466503-9467243,9467592-9467600
Length = 274
Score = 28.7 bits (61), Expect = 4.5
Identities = 18/43 (41%), Positives = 20/43 (46%), Gaps = 5/43 (11%)
Frame = -1
Query: 256 RRRPWKRGL*R-----EPLQQDRLGRRPDLAIGSARHHRQSGG 143
RRRPW RG R P + GRRP G H +SGG
Sbjct: 47 RRRPWSRGGGRAAPESTPPAKYARGRRPRRGSGGHAPHPESGG 89
>11_04_0091 -
13392864-13392950,13393534-13393579,13393706-13393819,
13394135-13394256,13394360-13394431,13395663-13395812,
13399258-13399341,13399459-13399560,13399634-13399671,
13399762-13399864,13399978-13400389,13400493-13400671
Length = 502
Score = 28.3 bits (60), Expect = 6.0
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +3
Query: 105 GHSCRNHQLSHGAPPLCR*CRADPI 179
G + +H+ GAPPL R C A P+
Sbjct: 109 GENLNHHRSPAGAPPLTRLCAAGPV 133
>08_02_1005 + 23468230-23468994
Length = 254
Score = 28.3 bits (60), Expect = 6.0
Identities = 16/40 (40%), Positives = 23/40 (57%)
Frame = -3
Query: 140 SMRKLMITARVTIRTTRKTGNAGGRVACGVIGIL*IYKFL 21
S+R L+ + RTT+ +G GG A GV GI ++K L
Sbjct: 10 SLRSLLRPSSDGRRTTKLSGGGGGGGAGGVGGIFKMFKLL 49
>11_03_0045 + 9253101-9253135,9253802-9253917,9255642-9256084
Length = 197
Score = 27.9 bits (59), Expect = 7.9
Identities = 16/34 (47%), Positives = 18/34 (52%)
Frame = -1
Query: 286 PRSSERCQPSRRRPWKRGL*REPLQQDRLGRRPD 185
PR S R + RRPW RG R L+ G RPD
Sbjct: 90 PRISGRQRGGGRRPWDRGRRRRRLEH---GGRPD 120
>09_04_0188 -
15410310-15410514,15410597-15410748,15410845-15411003,
15411062-15411367,15412508-15412535,15413174-15413290,
15413649-15413717,15413919-15414103
Length = 406
Score = 27.9 bits (59), Expect = 7.9
Identities = 15/38 (39%), Positives = 19/38 (50%)
Frame = +3
Query: 315 QSIDNRRSGRPSHGRGNRIHPEAAQ*CLPEREPSHLEP 428
+ I + R R SHG G P+AAQ L +R P P
Sbjct: 147 EDIRHHRLRRRSHGHGVLQGPQAAQLLLSDRRPELSSP 184
>03_01_0515 - 3864796-3865425
Length = 209
Score = 27.9 bits (59), Expect = 7.9
Identities = 12/24 (50%), Positives = 13/24 (54%)
Frame = +2
Query: 329 PPLRSPFSWTWKPYSPGGSPVMPP 400
PPL P S T P P P+MPP
Sbjct: 49 PPLAPPPSVTSSPPPPAAGPLMPP 72
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,113,727
Number of Sequences: 37544
Number of extensions: 438906
Number of successful extensions: 1365
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1287
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1363
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1721314888
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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