Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_pT_C05
         (456 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_01_0142 + 1054495-1054644,1054767-1055971,1056102-1056180,105...    27   5.4  
10_08_0983 + 22036489-22036505,22036814-22036928,22037040-220371...    27   9.5  

>07_01_0142 +
           1054495-1054644,1054767-1055971,1056102-1056180,
           1056619-1056822
          Length = 545

 Score = 27.5 bits (58), Expect = 5.4
 Identities = 12/27 (44%), Positives = 15/27 (55%)
 Frame = -3

Query: 199 IWKQQTPDLNNEQSVCINAFLCGRGLG 119
           +W  Q    +NE S+  NA LCGR  G
Sbjct: 517 VWTPQQ-SFSNEYSIPTNAILCGRAAG 542


>10_08_0983 +
           22036489-22036505,22036814-22036928,22037040-22037194,
           22037416-22037677,22037826-22038014
          Length = 245

 Score = 26.6 bits (56), Expect = 9.5
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = +3

Query: 84  VCYISTDCKRASPSPRPHRKAL 149
           V  I ++C RA P P P+ KAL
Sbjct: 148 VLVIGSECDRAKPFPDPYLKAL 169


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,484,223
Number of Sequences: 37544
Number of extensions: 211547
Number of successful extensions: 425
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 421
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 424
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 895500300
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)