Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P17_pT_C05
(456 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC034575-1|AAH34575.1| 1088|Homo sapiens ATP13A2 protein protein. 33 0.46
BC030267-1|AAH30267.1| 1158|Homo sapiens ATP13A2 protein protein. 33 0.46
AY461712-1|AAR23423.1| 1175|Homo sapiens putative N-ATPase protein. 33 0.46
AL354615-1|CAB89728.1| 1180|Homo sapiens hypothetical protein pr... 33 0.46
AL049569-7|CAI20367.1| 1158|Homo sapiens ATPase type 13A2 protein. 33 0.46
AL049569-6|CAI20366.1| 1180|Homo sapiens ATPase type 13A2 protein. 33 0.46
AK075310-1|BAC11539.1| 842|Homo sapiens protein ( Homo sapiens ... 33 0.46
AJ009947-1|CAA08912.1| 269|Homo sapiens putative ATPase protein. 33 0.46
BC008303-1|AAH08303.1| 235|Homo sapiens transmembrane protein 1... 29 7.6
AF258340-1|AAF68667.1| 235|Homo sapiens hepatocellular carcinom... 29 7.6
AC006479-1|AAP21884.1| 235|Homo sapiens unknown protein. 29 7.6
>BC034575-1|AAH34575.1| 1088|Homo sapiens ATP13A2 protein protein.
Length = 1088
Score = 33.1 bits (72), Expect = 0.46
Identities = 18/42 (42%), Positives = 25/42 (59%)
Frame = -2
Query: 149 QCLPMRTRAGRCSLTIS*DITYYA*LYLMGNVTSFIFVCIVH 24
+C+PM R GRCSL S + Y LY ++T FI V I++
Sbjct: 822 ECVPMVIREGRCSLDTSFSVFKYMALY---SLTQFISVLILY 860
>BC030267-1|AAH30267.1| 1158|Homo sapiens ATP13A2 protein protein.
Length = 1158
Score = 33.1 bits (72), Expect = 0.46
Identities = 18/42 (42%), Positives = 25/42 (59%)
Frame = -2
Query: 149 QCLPMRTRAGRCSLTIS*DITYYA*LYLMGNVTSFIFVCIVH 24
+C+PM R GRCSL S + Y LY ++T FI V I++
Sbjct: 870 ECVPMVIREGRCSLDTSFSVFKYMALY---SLTQFISVLILY 908
>AY461712-1|AAR23423.1| 1175|Homo sapiens putative N-ATPase protein.
Length = 1175
Score = 33.1 bits (72), Expect = 0.46
Identities = 18/42 (42%), Positives = 25/42 (59%)
Frame = -2
Query: 149 QCLPMRTRAGRCSLTIS*DITYYA*LYLMGNVTSFIFVCIVH 24
+C+PM R GRCSL S + Y LY ++T FI V I++
Sbjct: 909 ECVPMVIREGRCSLDTSFSVFKYMALY---SLTQFISVLILY 947
>AL354615-1|CAB89728.1| 1180|Homo sapiens hypothetical protein
protein.
Length = 1180
Score = 33.1 bits (72), Expect = 0.46
Identities = 18/42 (42%), Positives = 25/42 (59%)
Frame = -2
Query: 149 QCLPMRTRAGRCSLTIS*DITYYA*LYLMGNVTSFIFVCIVH 24
+C+PM R GRCSL S + Y LY ++T FI V I++
Sbjct: 914 ECVPMVIREGRCSLDTSFSVFKYMALY---SLTQFISVLILY 952
>AL049569-7|CAI20367.1| 1158|Homo sapiens ATPase type 13A2 protein.
Length = 1158
Score = 33.1 bits (72), Expect = 0.46
Identities = 18/42 (42%), Positives = 25/42 (59%)
Frame = -2
Query: 149 QCLPMRTRAGRCSLTIS*DITYYA*LYLMGNVTSFIFVCIVH 24
+C+PM R GRCSL S + Y LY ++T FI V I++
Sbjct: 870 ECVPMVIREGRCSLDTSFSVFKYMALY---SLTQFISVLILY 908
>AL049569-6|CAI20366.1| 1180|Homo sapiens ATPase type 13A2 protein.
Length = 1180
Score = 33.1 bits (72), Expect = 0.46
Identities = 18/42 (42%), Positives = 25/42 (59%)
Frame = -2
Query: 149 QCLPMRTRAGRCSLTIS*DITYYA*LYLMGNVTSFIFVCIVH 24
+C+PM R GRCSL S + Y LY ++T FI V I++
Sbjct: 914 ECVPMVIREGRCSLDTSFSVFKYMALY---SLTQFISVLILY 952
>AK075310-1|BAC11539.1| 842|Homo sapiens protein ( Homo sapiens
cDNA FLJ90829 fis, clone Y79AA1001787, weakly similar to
PROBABLE CALCIUM-TRANSPORTING ATPASE 9 (EC 3.6.1.38). ).
Length = 842
Score = 33.1 bits (72), Expect = 0.46
Identities = 18/42 (42%), Positives = 25/42 (59%)
Frame = -2
Query: 149 QCLPMRTRAGRCSLTIS*DITYYA*LYLMGNVTSFIFVCIVH 24
+C+PM R GRCSL S + Y LY ++T FI V I++
Sbjct: 576 ECVPMVIREGRCSLDTSFSVFKYMALY---SLTQFISVLILY 614
>AJ009947-1|CAA08912.1| 269|Homo sapiens putative ATPase protein.
Length = 269
Score = 33.1 bits (72), Expect = 0.46
Identities = 18/42 (42%), Positives = 25/42 (59%)
Frame = -2
Query: 149 QCLPMRTRAGRCSLTIS*DITYYA*LYLMGNVTSFIFVCIVH 24
+C+PM R GRCSL S + Y LY ++T FI V I++
Sbjct: 60 ECVPMVIREGRCSLDTSFSVFKYMALY---SLTQFISVLILY 98
>BC008303-1|AAH08303.1| 235|Homo sapiens transmembrane protein 176A
protein.
Length = 235
Score = 29.1 bits (62), Expect = 7.6
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +1
Query: 244 GDADSD*RAAERPEHTHYSSH 306
G ADSD A E P+HTH H
Sbjct: 2 GTADSDEMAPEAPQHTHIDVH 22
>AF258340-1|AAF68667.1| 235|Homo sapiens hepatocellular
carcinoma-associated antigen 112 protein.
Length = 235
Score = 29.1 bits (62), Expect = 7.6
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +1
Query: 244 GDADSD*RAAERPEHTHYSSH 306
G ADSD A E P+HTH H
Sbjct: 2 GTADSDEMAPEAPQHTHIDVH 22
>AC006479-1|AAP21884.1| 235|Homo sapiens unknown protein.
Length = 235
Score = 29.1 bits (62), Expect = 7.6
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +1
Query: 244 GDADSD*RAAERPEHTHYSSH 306
G ADSD A E P+HTH H
Sbjct: 2 GTADSDEMAPEAPQHTHIDVH 22
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 63,273,207
Number of Sequences: 237096
Number of extensions: 1191016
Number of successful extensions: 1626
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1565
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1624
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 3815180866
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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