Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_pT_C03
         (514 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A6X709 Cluster: Putative uncharacterized protein; n=1; ...    34   1.7  
UniRef50_Q23C36 Cluster: Putative uncharacterized protein; n=1; ...    34   1.7  
UniRef50_A5K131 Cluster: Putative uncharacterized protein; n=1; ...    33   5.0  
UniRef50_Q8E2E2 Cluster: Membrane protein, putative; n=5; Strept...    32   6.7  
UniRef50_Q6KHL3 Cluster: Putative cobalt ABC transporter permeas...    32   8.8  
UniRef50_Q236J9 Cluster: Leishmanolysin family protein; n=1; Tet...    32   8.8  
UniRef50_A7SKD2 Cluster: Predicted protein; n=2; Nematostella ve...    32   8.8  

>UniRef50_A6X709 Cluster: Putative uncharacterized protein; n=1;
           Ochrobactrum anthropi ATCC 49188|Rep: Putative
           uncharacterized protein - Ochrobactrum anthropi (strain
           ATCC 49188 / DSM 6882 / NCTC 12168)
          Length = 370

 Score = 34.3 bits (75), Expect = 1.7
 Identities = 20/75 (26%), Positives = 34/75 (45%)
 Frame = -2

Query: 489 KSSRAGVLDHQSTLKTAQNVRETVHSVRRPRCSSGKTSTDLLWLRLQQLRIYVSRLRRLS 310
           K S A  L   +      +V +T   +RR RC +G       ++R  +  I V+   R++
Sbjct: 20  KKSSAVPLLQNNAAHGLVHVSDTAPGIRRLRCGAG-----FRYVRFDKKAISVADRNRIA 74

Query: 309 RIQSPGLWIVRWLCC 265
           ++  P  W   W+CC
Sbjct: 75  KLAIPPAWNDVWICC 89


>UniRef50_Q23C36 Cluster: Putative uncharacterized protein; n=1;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 1524

 Score = 34.3 bits (75), Expect = 1.7
 Identities = 10/19 (52%), Positives = 15/19 (78%)
 Frame = -1

Query: 463 SSVNFENCSKCSRNCSFCS 407
           S++N++ C KCS NC FC+
Sbjct: 812 SNLNYQTCEKCSENCKFCT 830


>UniRef50_A5K131 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium vivax|Rep: Putative uncharacterized protein -
           Plasmodium vivax
          Length = 1021

 Score = 32.7 bits (71), Expect = 5.0
 Identities = 17/67 (25%), Positives = 35/67 (52%)
 Frame = -1

Query: 202 Y*FNKNILKNIMILLFISFEILINNFRGLLSIYKTPLFLSVFFFSCQLPFCECLQDKIXR 23
           Y F   ++KN++I + ++   L++      S+Y     +S+FFF   +   + +++KI  
Sbjct: 237 YSFFFKVMKNLLIYISVTGMTLVSALSAFTSLYSPYTNISLFFFFVTIKKVKIIENKIKF 296

Query: 22  GTNHESV 2
            TN  S+
Sbjct: 297 VTNELSL 303


>UniRef50_Q8E2E2 Cluster: Membrane protein, putative; n=5;
           Streptococcus agalactiae|Rep: Membrane protein, putative
           - Streptococcus agalactiae serotype V
          Length = 463

 Score = 32.3 bits (70), Expect = 6.7
 Identities = 16/38 (42%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
 Frame = -1

Query: 184 ILKNIMILLFISFEILINNFRGLLSIYKTP-LFLSVFF 74
           +LK ++I        LI N +  LSI +TP LF+S+FF
Sbjct: 249 LLKKLVIYFIFFIATLIGNLKNELSILETPLLFISIFF 286


>UniRef50_Q6KHL3 Cluster: Putative cobalt ABC transporter permease
           protein; n=1; Mycoplasma mobile|Rep: Putative cobalt ABC
           transporter permease protein - Mycoplasma mobile
          Length = 304

 Score = 31.9 bits (69), Expect = 8.8
 Identities = 12/34 (35%), Positives = 23/34 (67%)
 Frame = -1

Query: 172 IMILLFISFEILINNFRGLLSIYKTPLFLSVFFF 71
           ++I + I+F I   N +GL+ I++ PL++ +F F
Sbjct: 46  LLIPVIIAFLIATKNPKGLIRIFRLPLYVGIFIF 79


>UniRef50_Q236J9 Cluster: Leishmanolysin family protein; n=1;
            Tetrahymena thermophila SB210|Rep: Leishmanolysin family
            protein - Tetrahymena thermophila SB210
          Length = 5199

 Score = 31.9 bits (69), Expect = 8.8
 Identities = 12/26 (46%), Positives = 14/26 (53%), Gaps = 1/26 (3%)
 Frame = -1

Query: 472  CPRSSV-NFENCSKCSRNCSFCSPSS 398
            CP+    N   CSKCS NC  C  S+
Sbjct: 2844 CPQGQYFNLNQCSKCSSNCKICKDSN 2869


>UniRef50_A7SKD2 Cluster: Predicted protein; n=2; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 293

 Score = 31.9 bits (69), Expect = 8.8
 Identities = 20/72 (27%), Positives = 30/72 (41%), Gaps = 2/72 (2%)
 Frame = -1

Query: 472 CPRSSVNFENCSKCSRNCSFCSPSSL*LWQDLNRSTLVTA-TTITDIRIQATSVIPDTV- 299
           C  +   F     CS+ C FC         D  + T  +  TT+T  RI+  S +  T+ 
Sbjct: 2   CHDAKFGFVMRGGCSKTCGFCKGEDTSSTTDKPKPTKASVLTTVTTARIKKESGVDSTIP 61

Query: 298 PWPMDRTVAMLP 263
           P+  D  V + P
Sbjct: 62  PYKKDGCVDVFP 73


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 409,774,558
Number of Sequences: 1657284
Number of extensions: 7023865
Number of successful extensions: 24505
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 22795
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24483
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 31364627325
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)