Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P17_pT_C02
(779 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_A0Q1M8 Cluster: Serine proteases, subtilase family; n=1... 38 0.21
UniRef50_Q33E80 Cluster: Putative uncharacterized protein; n=1; ... 35 2.0
UniRef50_A7QLU7 Cluster: Chromosome chr18 scaffold_122, whole ge... 34 3.5
UniRef50_Q8I5C8 Cluster: Putative uncharacterized protein; n=3; ... 34 4.6
UniRef50_Q97PC4 Cluster: ABC transporter, ATP-binding protein; n... 33 8.0
UniRef50_Q4K0D1 Cluster: Flippase Wzx; n=1; Streptococcus pneumo... 33 8.0
UniRef50_Q1DWX4 Cluster: Putative uncharacterized protein; n=1; ... 33 8.0
UniRef50_P48917 Cluster: NADH-ubiquinone oxidoreductase chain 4;... 33 8.0
>UniRef50_A0Q1M8 Cluster: Serine proteases, subtilase family; n=1;
Clostridium novyi NT|Rep: Serine proteases, subtilase
family - Clostridium novyi (strain NT)
Length = 1180
Score = 38.3 bits (85), Expect = 0.21
Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = +1
Query: 211 DNRKYTITFRFSRYKLNIKNIAI*IDNSMNIEEKKNTNAVL-SRVSNEICDN 363
DNR YT+ F+ + IKN I ++N +E NT L + V NE C N
Sbjct: 833 DNRNYTLRFKANENLSGIKNFKIKVNNDFYKDENNNTELKLKTNVKNEYCVN 884
>UniRef50_Q33E80 Cluster: Putative uncharacterized protein; n=1;
Enterococcus faecium|Rep: Putative uncharacterized
protein - Enterococcus faecium (Streptococcus faecium)
Length = 147
Score = 35.1 bits (77), Expect = 2.0
Identities = 16/40 (40%), Positives = 24/40 (60%)
Frame = -1
Query: 287 SIYIAIFLMFNLYRENLNVIVYFRLSIFCGFIATSSTKTL 168
SIYI + ++F+L+ NL I YF S+ F+ +S K L
Sbjct: 85 SIYIIVAILFSLFHLNLYFIPYFMTSLILSFVYDNSDKRL 124
>UniRef50_A7QLU7 Cluster: Chromosome chr18 scaffold_122, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_122, whole genome shotgun
sequence - Vitis vinifera (Grape)
Length = 365
Score = 34.3 bits (75), Expect = 3.5
Identities = 18/51 (35%), Positives = 33/51 (64%), Gaps = 2/51 (3%)
Frame = -1
Query: 320 VFFFSSIFMELSIYIAIFLMFNLYRENLN--VIVYFRLSIFCGFIATSSTK 174
++FF + + +I + IF++F L+++++N V +F L IFC F SST+
Sbjct: 315 IYFFEN--NKKNIILCIFIIFLLFKKHINFCVFYFFYLIIFCIFTKISSTQ 363
>UniRef50_Q8I5C8 Cluster: Putative uncharacterized protein; n=3;
Plasmodium|Rep: Putative uncharacterized protein -
Plasmodium falciparum (isolate 3D7)
Length = 1834
Score = 33.9 bits (74), Expect = 4.6
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = -3
Query: 696 SFSLKIFYIFFVIVWNGNYYFYFNFETDVNCHFY 595
S L+I Y F +++N + Y Y+NF D++ + Y
Sbjct: 966 SMCLRIVYYLFELIFNISTYIYYNFNDDIDINIY 999
>UniRef50_Q97PC4 Cluster: ABC transporter, ATP-binding protein;
n=51; Firmicutes|Rep: ABC transporter, ATP-binding
protein - Streptococcus pneumoniae
Length = 492
Score = 33.1 bits (72), Expect = 8.0
Identities = 20/48 (41%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Frame = -1
Query: 329 TAFVFFFSSIFMELSIYIAIFL--MFNLYRENLNVIVYFRLSIFCGFI 192
T F ++I L IY+AI + +FN YR L V VY + I GFI
Sbjct: 390 TGISFLLNTISGILCIYLAISIGQLFNEYRTALAVAVYIGIQIVIGFI 437
>UniRef50_Q4K0D1 Cluster: Flippase Wzx; n=1; Streptococcus
pneumoniae|Rep: Flippase Wzx - Streptococcus pneumoniae
Length = 479
Score = 33.1 bits (72), Expect = 8.0
Identities = 17/43 (39%), Positives = 25/43 (58%)
Frame = -1
Query: 317 FFFSSIFMELSIYIAIFLMFNLYRENLNVIVYFRLSIFCGFIA 189
+ F +I +S A+FL+F L RE N+ Y +SIF G +A
Sbjct: 145 YLFITIRYIISQIFALFLLFLLVREQDNITQYAFVSIFAGILA 187
>UniRef50_Q1DWX4 Cluster: Putative uncharacterized protein; n=1;
Coccidioides immitis|Rep: Putative uncharacterized
protein - Coccidioides immitis
Length = 56
Score = 33.1 bits (72), Expect = 8.0
Identities = 14/39 (35%), Positives = 26/39 (66%), Gaps = 2/39 (5%)
Frame = -1
Query: 320 VFFFSSIFMELSIYIAI--FLMFNLYRENLNVIVYFRLS 210
VFFFSS F+ ++Y+ I F+++++ E+ I +F L+
Sbjct: 14 VFFFSSTFLTFTLYLMILEFMLYSVTSESTKTIAHFNLN 52
>UniRef50_P48917 Cluster: NADH-ubiquinone oxidoreductase chain 4;
n=3; Eukaryota|Rep: NADH-ubiquinone oxidoreductase chain
4 - Pichia canadensis (Yeast) (Hansenula wingei)
Length = 511
Score = 33.1 bits (72), Expect = 8.0
Identities = 25/63 (39%), Positives = 34/63 (53%), Gaps = 7/63 (11%)
Frame = -1
Query: 338 RDKTAFVFF----FSSIFMELSIYIAIFLMFNL-YRENLNVIVYFRLS--IFCGFIATSS 180
R+K A+ F FSS+FM LSI I I+++ N+ Y N+I+ L IF G I
Sbjct: 180 REKAAYYIFIYTLFSSLFMLLSIGIYIYMINNIDYNNIYNIILSIDLQSIIFIGLIIGIL 239
Query: 179 TKT 171
KT
Sbjct: 240 VKT 242
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 689,960,816
Number of Sequences: 1657284
Number of extensions: 13352076
Number of successful extensions: 30937
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 29251
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30872
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 65850543200
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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