Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_pT_C02
         (779 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    23   2.1  
AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory recept...    23   2.7  
AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory recept...    23   2.7  
AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory recept...    23   2.7  
AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    23   3.6  
AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    22   6.3  
AY600516-1|AAT11864.1|  143|Tribolium castaneum optomotor-blind-...    21   8.4  
AY600515-1|AAT11863.1|  134|Tribolium castaneum optomotor-blind-...    21   8.4  

>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 7/16 (43%), Positives = 13/16 (81%)
 Frame = +3

Query: 222 IHNNIQVFTIQIEHQK 269
           + NN+Q +++Q+ HQK
Sbjct: 336 LENNVQSYSLQLLHQK 351


>AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory receptor
           candidate 30 protein.
          Length = 394

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 8/32 (25%), Positives = 18/32 (56%)
 Frame = -1

Query: 281 YIAIFLMFNLYRENLNVIVYFRLSIFCGFIAT 186
           ++ +  +  ++ + LNVI   RL  +C  +A+
Sbjct: 84  FVTVLQLHKIFAKGLNVIEANRLFFYCSGLAS 115


>AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory receptor
           candidate 29 protein.
          Length = 429

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 8/32 (25%), Positives = 18/32 (56%)
 Frame = -1

Query: 281 YIAIFLMFNLYRENLNVIVYFRLSIFCGFIAT 186
           ++ +  +  ++ + LNVI   RL  +C  +A+
Sbjct: 84  FVTVLQLHKIFAKGLNVIEANRLFFYCSGLAS 115


>AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory receptor
           candidate 7 protein.
          Length = 429

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 8/32 (25%), Positives = 18/32 (56%)
 Frame = -1

Query: 281 YIAIFLMFNLYRENLNVIVYFRLSIFCGFIAT 186
           ++ +  +  ++ + LNVI   RL  +C  +A+
Sbjct: 84  FVTVLQLHKIFAKGLNVIEANRLFFYCSGLAS 115


>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 13/32 (40%), Positives = 20/32 (62%)
 Frame = -1

Query: 251 YRENLNVIVYFRLSIFCGFIATSSTKTLKHLC 156
           YR+   ++ YF ++I+   I TSS  TL H+C
Sbjct: 34  YRKFCRILKYFIIAIYVLTILTSSV-TL-HVC 63


>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 9/23 (39%), Positives = 11/23 (47%)
 Frame = -1

Query: 779 YFIXYAKLYYKGCKEKHNEVVFF 711
           YF  Y   +Y   K+  NEV  F
Sbjct: 278 YFAIYEMHWYDASKQIQNEVFIF 300


>AY600516-1|AAT11864.1|  143|Tribolium castaneum
           optomotor-blind-like protein protein.
          Length = 143

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 6/20 (30%), Positives = 13/20 (65%)
 Frame = -1

Query: 602 IFIDFSLSEDCRYKLFSNMY 543
           + +D   ++DCRYK  ++ +
Sbjct: 21  LLMDIVAADDCRYKFHNSRW 40


>AY600515-1|AAT11863.1|  134|Tribolium castaneum
           optomotor-blind-like protein protein.
          Length = 134

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 6/20 (30%), Positives = 13/20 (65%)
 Frame = -1

Query: 602 IFIDFSLSEDCRYKLFSNMY 543
           + +D   ++DCRYK  ++ +
Sbjct: 21  LLMDIVAADDCRYKFHNSRW 40


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 179,119
Number of Sequences: 336
Number of extensions: 4102
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21065107
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)