Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_pT_C02
         (779 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U29486-1|AAC46995.1|  695|Anopheles gambiae ATP-binding-cassette...    25   2.6  
U29485-1|AAC46994.1|  695|Anopheles gambiae ATP-binding-cassette...    25   2.6  
U29484-1|AAC47423.1|  673|Anopheles gambiae ATP-binding-cassette...    25   2.6  
M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles ...    23   8.0  
AY391745-1|AAR28995.1|  460|Anopheles gambiae putative GPCR prot...    23   8.0  

>U29486-1|AAC46995.1|  695|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 695

 Score = 25.0 bits (52), Expect = 2.6
 Identities = 13/33 (39%), Positives = 20/33 (60%)
 Frame = +2

Query: 44  TLFYRISLQTNLVISYDTMLVSIRISKTT*IAT 142
           T FY I  ++ L +  D MLV +R+ +T  +AT
Sbjct: 420 TQFYCILWRSWLSVLKDPMLVKVRLLQTAMVAT 452


>U29485-1|AAC46994.1|  695|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 695

 Score = 25.0 bits (52), Expect = 2.6
 Identities = 13/33 (39%), Positives = 20/33 (60%)
 Frame = +2

Query: 44  TLFYRISLQTNLVISYDTMLVSIRISKTT*IAT 142
           T FY I  ++ L +  D MLV +R+ +T  +AT
Sbjct: 420 TQFYCILWRSWLSVLKDPMLVKVRLLQTAMVAT 452


>U29484-1|AAC47423.1|  673|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 673

 Score = 25.0 bits (52), Expect = 2.6
 Identities = 13/33 (39%), Positives = 20/33 (60%)
 Frame = +2

Query: 44  TLFYRISLQTNLVISYDTMLVSIRISKTT*IAT 142
           T FY I  ++ L +  D MLV +R+ +T  +AT
Sbjct: 398 TQFYCILWRSWLSVLKDPMLVKVRLLQTAMVAT 430


>M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles
           gambiae RT2 retroposon. ).
          Length = 574

 Score = 23.4 bits (48), Expect = 8.0
 Identities = 11/20 (55%), Positives = 13/20 (65%)
 Frame = +2

Query: 374 YCFVLRRNYRLVTTGRLRSQ 433
           Y  V+RR YR   TG+ RSQ
Sbjct: 262 YSEVVRRRYRGKATGKPRSQ 281


>AY391745-1|AAR28995.1|  460|Anopheles gambiae putative GPCR
           protein.
          Length = 460

 Score = 23.4 bits (48), Expect = 8.0
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = -2

Query: 583 SLRIVDINYFLTCTKLQIYFLELRY 509
           S+ + D N+F+  T   ++ L LRY
Sbjct: 276 SMSMKDRNFFINITLFALFTLSLRY 300


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 762,293
Number of Sequences: 2352
Number of extensions: 14049
Number of successful extensions: 69
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 69
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 69
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 81497388
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)